© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|3065 |
| Gene name | |
| Location | scaffold_243:15688..18240 |
| Strand | - |
| Gene length (bp) | 2552 |
| Transcript length (bp) | 2310 |
| Coding sequence length (bp) | 2310 |
| Protein length (aa) | 770 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05185 | PRMT5 | PRMT5 arginine-N-methyltransferase | 6.8E-65 | 387 | 564 |
| PF17285 | PRMT5_TIM | PRMT5 TIM barrel domain | 1.9E-64 | 47 | 316 |
| PF17286 | PRMT5_C | PRMT5 oligomerisation domain | 7.5E-42 | 567 | 754 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P78963|SKB1_SCHPO | Protein arginine N-methyltransferase skb1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=skb1 PE=1 SV=2 | 101 | 754 | 2.0E-121 |
| sp|Q6NUA1|ANM5_XENLA | Protein arginine N-methyltransferase 5 OS=Xenopus laevis GN=prmt5 PE=1 SV=1 | 41 | 762 | 2.0E-90 |
| sp|Q5R698|ANM5_PONAB | Protein arginine N-methyltransferase 5 OS=Pongo abelii GN=PRMT5 PE=2 SV=3 | 41 | 762 | 3.0E-89 |
| sp|O14744|ANM5_HUMAN | Protein arginine N-methyltransferase 5 OS=Homo sapiens GN=PRMT5 PE=1 SV=4 | 41 | 762 | 9.0E-89 |
| sp|Q4R5M3|ANM5_MACFA | Protein arginine N-methyltransferase 5 OS=Macaca fascicularis GN=PRMT5 PE=2 SV=3 | 41 | 762 | 4.0E-88 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P78963|SKB1_SCHPO | Protein arginine N-methyltransferase skb1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=skb1 PE=1 SV=2 | 101 | 754 | 2.0E-121 |
| sp|Q6NUA1|ANM5_XENLA | Protein arginine N-methyltransferase 5 OS=Xenopus laevis GN=prmt5 PE=1 SV=1 | 41 | 762 | 2.0E-90 |
| sp|Q5R698|ANM5_PONAB | Protein arginine N-methyltransferase 5 OS=Pongo abelii GN=PRMT5 PE=2 SV=3 | 41 | 762 | 3.0E-89 |
| sp|O14744|ANM5_HUMAN | Protein arginine N-methyltransferase 5 OS=Homo sapiens GN=PRMT5 PE=1 SV=4 | 41 | 762 | 9.0E-89 |
| sp|Q4R5M3|ANM5_MACFA | Protein arginine N-methyltransferase 5 OS=Macaca fascicularis GN=PRMT5 PE=2 SV=3 | 41 | 762 | 4.0E-88 |
| sp|A7YW45|ANM5_BOVIN | Protein arginine N-methyltransferase 5 OS=Bos taurus GN=PRMT5 PE=2 SV=1 | 41 | 762 | 8.0E-88 |
| sp|Q8CIG8|ANM5_MOUSE | Protein arginine N-methyltransferase 5 OS=Mus musculus GN=Prmt5 PE=1 SV=3 | 41 | 762 | 2.0E-87 |
| sp|Q8GWT4|ANM15_ARATH | Protein arginine N-methyltransferase 1.5 OS=Arabidopsis thaliana GN=PMRT15 PE=1 SV=2 | 97 | 754 | 5.0E-87 |
| sp|Q6YXZ7|ANM5_ORYSJ | Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. japonica GN=PRMT5 PE=2 SV=1 | 97 | 754 | 7.0E-86 |
| sp|A2X0Q3|ANM5_ORYSI | Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. indica GN=PRMT5 PE=3 SV=2 | 97 | 754 | 2.0E-85 |
| sp|Q54KI3|ANM5_DICDI | Protein arginine N-methyltransferase 5 OS=Dictyostelium discoideum GN=prmt5 PE=3 SV=1 | 122 | 735 | 1.0E-68 |
| sp|P38274|HSL7_YEAST | Protein arginine N-methyltransferase HSL7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HSL7 PE=1 SV=1 | 50 | 752 | 1.0E-68 |
| sp|Q9U6Y9|ANM5_DROME | Protein arginine N-methyltransferase 5 OS=Drosophila melanogaster GN=csul PE=1 SV=2 | 230 | 754 | 2.0E-52 |
| sp|P46580|ANM5_CAEEL | Protein arginine N-methyltransferase 5 OS=Caenorhabditis elegans GN=prmt-5 PE=1 SV=2 | 118 | 754 | 6.0E-51 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|3065 MASSESSAPVEGQSPGSRQPIFHIGNHDSTRDVPLTDLQYGHLLNQGISFATTPITNSRFKDSIFKLVSDYMTLL DHNGETATSTTSASRAGPILPPLTPEDTGLFPSSTVTTCTAFVSPWIDLCSSDPIIASVSRQVLNLEINYANFCG VRSIVVTGPLRDACNGGNQGLVQFSRAVHEALTIGNCVSFLIHMPMYREPNGIDSVETLSSLKPQKPEIEMKVID LFSCWDSWHHIRTVCRYNSRLFVALKLPRMMPEKELQGRWFAEPVHFLTIGPDVFQINRNGYPCFSRHHQEMIFA HMRLKATPWLLLCDVGPDASQFRAHSPSLLAAPPPVTDEDFPTLAEAHEPFDAPQGRSPCGNAHMAYLQWLESQQ PLLSALESTTLISFQDWLQSPLQPLSDNLESATYEVFEGDPVKYNRYEDAVVDALSDWRELGLPTSKKGVVVVAV AGSGRGPLVTRALRAAELTGVAIEVWAVEKNPNAYVYLLRQNQTEWGGRVNVVKADMRTWKGPIVSERADTGPVY GKVDVLISELLGSFGDNELSPECLDGIQHVLAEPHGISIPSSYTAHLSPVSDPKVYAEILTRSAVDATAFDTPWV VRLYALDFVCQRVPHHPRFQQAWEFSHPIPDSTLQAIQYRRSGGVVGGGGGSMAGAAGANDHNSRFCHLTFVCRC PGVIHGLAGYFESTLYESKLEGGEGAKVEISTHPERMDSKSKDMASWFPIFFPLREPLTYPYDSELEVSMWRQTD DTRIATSALCSSRKVACLM* |
| Coding | >Ophio5|3065 ATGGCTTCTTCCGAAAGCTCCGCGCCGGTCGAGGGCCAAAGCCCAGGCTCTCGGCAACCCATTTTTCACATCGGC AACCACGATTCGACCCGAGACGTTCCTCTCACTGACTTGCAATACGGCCATCTGTTGAATCAGGGTATCAGCTTT GCGACCACGCCCATAACCAACAGCCGCTTTAAAGACAGCATCTTCAAGCTCGTTTCGGACTATATGACGTTGCTG GACCACAACGGCGAGACTGCAACCAGCACCACCTCGGCGTCTCGGGCTGGCCCCATCCTACCTCCCCTGACCCCC GAAGACACCGGTCTGTTCCCGTCATCGACAGTCACCACCTGCACGGCTTTTGTGAGCCCATGGATCGACCTCTGC TCCTCGGACCCTATCATCGCCAGCGTCTCCCGCCAGGTGCTGAACCTCGAGATCAACTACGCCAATTTTTGCGGT GTCAGGAGCATCGTCGTCACCGGGCCGCTTCGTGATGCGTGCAACGGTGGCAATCAAGGGTTGGTTCAGTTTTCT CGTGCCGTACATGAGGCCCTGACCATTGGCAACTGCGTATCCTTCTTAATTCACATGCCCATGTACCGAGAGCCC AACGGCATTGACTCGGTCGAAACGCTCTCATCGTTGAAGCCTCAGAAGCCTGAAATTGAGATGAAAGTGATCGAT CTCTTCAGCTGTTGGGACTCTTGGCATCACATTCGAACGGTGTGCCGCTACAATTCAAGGCTTTTCGTTGCCCTC AAGCTGCCCAGAATGATGCCAGAGAAGGAACTGCAGGGTCGGTGGTTTGCGGAGCCTGTTCACTTTCTCACCATA GGGCCAGATGTCTTCCAGATCAACAGGAATGGCTACCCCTGCTTCTCCAGACACCATCAGGAGATGATATTTGCT CACATGCGGCTCAAGGCTACGCCCTGGCTGCTTCTGTGTGACGTCGGCCCCGACGCCTCCCAGTTCAGGGCCCAT TCACCCTCGCTGCTGGCAGCTCCGCCGCCAGTAACTGACGAAGACTTTCCGACCCTGGCTGAAGCCCACGAGCCG TTCGATGCGCCTCAAGGCCGTTCTCCCTGCGGAAACGCCCACATGGCATACCTGCAGTGGCTCGAGTCGCAGCAG CCACTTCTTTCGGCCCTCGAATCGACTACCCTGATAAGCTTCCAAGACTGGCTGCAGTCGCCGCTCCAACCGCTG TCTGACAACCTAGAGTCGGCTACGTACGAGGTTTTCGAGGGCGATCCGGTCAAGTACAACCGGTACGAGGACGCC GTCGTGGACGCCTTGAGTGACTGGAGGGAGCTTGGTCTGCCGACGTCGAAGAAGGGCGTCGTCGTCGTGGCCGTC GCTGGCTCTGGGCGCGGGCCCCTCGTCACTCGAGCCCTGCGGGCGGCGGAGCTCACGGGCGTTGCCATCGAGGTG TGGGCGGTAGAGAAGAACCCCAACGCATACGTCTATCTCCTGCGCCAAAACCAAACGGAATGGGGCGGTCGCGTC AACGTGGTCAAAGCGGACATGCGGACCTGGAAGGGGCCCATTGTGAGCGAGAGAGCGGACACGGGTCCGGTCTAT GGCAAGGTGGATGTGCTGATATCAGAGCTTCTCGGCTCTTTTGGCGACAACGAGCTGTCCCCCGAATGCCTGGAC GGCATCCAGCACGTGCTGGCCGAGCCGCACGGCATTTCCATCCCAAGCTCCTACACGGCACACCTCAGCCCCGTT TCGGACCCCAAGGTCTATGCCGAGATTCTAACCAGATCGGCCGTGGACGCCACGGCCTTTGACACGCCCTGGGTC GTCCGGCTCTACGCGCTGGACTTTGTCTGTCAGCGCGTGCCGCATCACCCTCGGTTCCAGCAGGCCTGGGAGTTC TCCCACCCGATCCCAGATTCGACACTACAGGCCATTCAATACAGGCGCTCCGGGGGCGTCGTCGGCGGTGGCGGG GGGAGCATGGCCGGGGCGGCCGGCGCCAACGACCACAACTCGCGGTTCTGTCACTTGACCTTTGTGTGCCGCTGC CCTGGCGTCATCCACGGGCTGGCCGGATACTTCGAGTCGACACTGTACGAGTCGAAGCTGGAGGGGGGCGAGGGG GCGAAGGTGGAAATCAGTACGCATCCGGAGAGGATGGACAGCAAGAGCAAAGACATGGCTTCGTGGTTTCCCATC TTCTTCCCTCTGAGAGAGCCCTTGACGTATCCCTACGACTCGGAGCTTGAGGTGAGCATGTGGCGCCAGACGGAC GACACCAGGATCGCCACGTCTGCCCTTTGCAGCAGCCGAAAGGTGGCCTGTCTGATGTAG |
| Transcript | >Ophio5|3065 ATGGCTTCTTCCGAAAGCTCCGCGCCGGTCGAGGGCCAAAGCCCAGGCTCTCGGCAACCCATTTTTCACATCGGC AACCACGATTCGACCCGAGACGTTCCTCTCACTGACTTGCAATACGGCCATCTGTTGAATCAGGGTATCAGCTTT GCGACCACGCCCATAACCAACAGCCGCTTTAAAGACAGCATCTTCAAGCTCGTTTCGGACTATATGACGTTGCTG GACCACAACGGCGAGACTGCAACCAGCACCACCTCGGCGTCTCGGGCTGGCCCCATCCTACCTCCCCTGACCCCC GAAGACACCGGTCTGTTCCCGTCATCGACAGTCACCACCTGCACGGCTTTTGTGAGCCCATGGATCGACCTCTGC TCCTCGGACCCTATCATCGCCAGCGTCTCCCGCCAGGTGCTGAACCTCGAGATCAACTACGCCAATTTTTGCGGT GTCAGGAGCATCGTCGTCACCGGGCCGCTTCGTGATGCGTGCAACGGTGGCAATCAAGGGTTGGTTCAGTTTTCT CGTGCCGTACATGAGGCCCTGACCATTGGCAACTGCGTATCCTTCTTAATTCACATGCCCATGTACCGAGAGCCC AACGGCATTGACTCGGTCGAAACGCTCTCATCGTTGAAGCCTCAGAAGCCTGAAATTGAGATGAAAGTGATCGAT CTCTTCAGCTGTTGGGACTCTTGGCATCACATTCGAACGGTGTGCCGCTACAATTCAAGGCTTTTCGTTGCCCTC AAGCTGCCCAGAATGATGCCAGAGAAGGAACTGCAGGGTCGGTGGTTTGCGGAGCCTGTTCACTTTCTCACCATA GGGCCAGATGTCTTCCAGATCAACAGGAATGGCTACCCCTGCTTCTCCAGACACCATCAGGAGATGATATTTGCT CACATGCGGCTCAAGGCTACGCCCTGGCTGCTTCTGTGTGACGTCGGCCCCGACGCCTCCCAGTTCAGGGCCCAT TCACCCTCGCTGCTGGCAGCTCCGCCGCCAGTAACTGACGAAGACTTTCCGACCCTGGCTGAAGCCCACGAGCCG TTCGATGCGCCTCAAGGCCGTTCTCCCTGCGGAAACGCCCACATGGCATACCTGCAGTGGCTCGAGTCGCAGCAG CCACTTCTTTCGGCCCTCGAATCGACTACCCTGATAAGCTTCCAAGACTGGCTGCAGTCGCCGCTCCAACCGCTG TCTGACAACCTAGAGTCGGCTACGTACGAGGTTTTCGAGGGCGATCCGGTCAAGTACAACCGGTACGAGGACGCC GTCGTGGACGCCTTGAGTGACTGGAGGGAGCTTGGTCTGCCGACGTCGAAGAAGGGCGTCGTCGTCGTGGCCGTC GCTGGCTCTGGGCGCGGGCCCCTCGTCACTCGAGCCCTGCGGGCGGCGGAGCTCACGGGCGTTGCCATCGAGGTG TGGGCGGTAGAGAAGAACCCCAACGCATACGTCTATCTCCTGCGCCAAAACCAAACGGAATGGGGCGGTCGCGTC AACGTGGTCAAAGCGGACATGCGGACCTGGAAGGGGCCCATTGTGAGCGAGAGAGCGGACACGGGTCCGGTCTAT GGCAAGGTGGATGTGCTGATATCAGAGCTTCTCGGCTCTTTTGGCGACAACGAGCTGTCCCCCGAATGCCTGGAC GGCATCCAGCACGTGCTGGCCGAGCCGCACGGCATTTCCATCCCAAGCTCCTACACGGCACACCTCAGCCCCGTT TCGGACCCCAAGGTCTATGCCGAGATTCTAACCAGATCGGCCGTGGACGCCACGGCCTTTGACACGCCCTGGGTC GTCCGGCTCTACGCGCTGGACTTTGTCTGTCAGCGCGTGCCGCATCACCCTCGGTTCCAGCAGGCCTGGGAGTTC TCCCACCCGATCCCAGATTCGACACTACAGGCCATTCAATACAGGCGCTCCGGGGGCGTCGTCGGCGGTGGCGGG GGGAGCATGGCCGGGGCGGCCGGCGCCAACGACCACAACTCGCGGTTCTGTCACTTGACCTTTGTGTGCCGCTGC CCTGGCGTCATCCACGGGCTGGCCGGATACTTCGAGTCGACACTGTACGAGTCGAAGCTGGAGGGGGGCGAGGGG GCGAAGGTGGAAATCAGTACGCATCCGGAGAGGATGGACAGCAAGAGCAAAGACATGGCTTCGTGGTTTCCCATC TTCTTCCCTCTGAGAGAGCCCTTGACGTATCCCTACGACTCGGAGCTTGAGGTGAGCATGTGGCGCCAGACGGAC GACACCAGGATCGCCACGTCTGCCCTTTGCAGCAGCCGAAAGGTGGCCTGTCTGATGTAG |
| Gene | >Ophio5|3065 ATGGCTTCTTCCGAAAGCTCCGCGCCGGTCGAGGGCCAAAGCCCAGGCTCTCGGCAACCCATTTTTCACATCGGC AACCACGATTCGACCCGAGACGTTCCTCTCACTGACTTGCAATACGGCCATCTGTTGAATCAGGGTGTAAGTCGC CGTCGATGCCTTTCGCGTCTCTGGCCCGCCGTCTCTGACTCATCAACAAGATCAGCTTTGCGACCACGCCCATAA CCAACAGCCGCTTTAAAGACAGCATCTTCAAGCTCGTTTCGGACTATATGACGTTGCTGGACCACAACGGCGAGA CTGCAACCAGCACCACCTCGGCGTCTCGGGCTGGCCCCATCCTACCTCCCCTGACCCCCGAAGACACCGGTCTGT TCCCGTCATCGACAGTCACCACCTGCACGGCTTTTGTGAGCCCATGGATCGACCTCTGCTCCTCGGACCCTATCA TCGCCAGCGTCTCCCGCCAGGTGCTGAACCTCGAGATCAACTACGCCAATTTTTGCGGTGTCAGGAGCATCGTCG TCACCGGGCCGCTTCGTGATGCGTGCAACGGTGGCAATCAAGGGTTGGTTCAGTTTTCTCGTGCCGTACATGAGG CCCTGACCATTGGCAACTGCGTATCCTTCTTAATTCACATGCCCATGTACCGAGAGCCCAACGGCATTGACTCGG TCGAAACGCTCTCATCGTTGAAGCCTCAGAAGCCTGAAATTGAGATGAAAGTGATCGATCTCTTCAGCTGTTGGG ACTCTTGGCATCACATTCGAACGGTGTGCCGCTACAATTCAAGGCTTTTCGTTGGTGAGCAGAAAGCCACCTCCG CACGTTTTCCATCAGTGCTGACGGCAGTTCCGCCACATCTAGCCCTCAAGCTGCCCAGAATGATGCCAGAGAAGG AACTGCAGGGTCGGTGGTTTGCGGAGCCTGTTCACTTTCTCACCATAGGGCCAGATGTCTTCCAGATCAACAGGA ATGGCTACCCCTGCTTCTCCAGACACCATCAGGAGATGATATTTGCTCACATGCGGCTCAAGGCTACGCCCTGGC TGCTTCTGTGTGACGTCGGCCCCGACGCCTCCCAGTTCAGGGCCCATTCACCCTCGCTGCTGGCAGCTCCGCCGC CAGTAACTGACGAAGACTTTCCGACCCTGGCTGAAGCCCACGAGCCGTTCGATGCGCCTCAAGGCCGTTCTCCCT GCGGAAACGCCCACATGGCATACCTGCAGTGGCTCGAGTCGCAGCAGCCACTTCTTTCGGCCCTCGAATCGACTA CCCTGATAAGCTTCCAAGACTGGCTGCAGTCGCCGCTCCAACCGCTGTCTGACAACCTAGAGTCGGCTACGTACG AGGTTTTCGAGGGCGATCCGGTCAAGTACAACCGGTACGAGGACGCCGTCGTGGACGCCTTGAGTGACTGGAGGG AGCTTGGTCTGCCGACGTCGAAGAAGGGCGTCGTCGTCGTGGCCGTCGCTGGCTCTGGGCGCGGGCCCCTCGTCA CTCGAGCCCTGCGGGCGGCGGAGCTCACGGGCGTTGCCATCGAGGTGTGGGCGGTAGAGAAGAACCCCAACGCAT ACGTCTATCTCCTGCGCCAAAACCAAACGGAATGGGGCGGTCGCGTCAACGTGGTCAAAGCGGACATGCGGACCT GGAAGGGGCCCATTGTGAGCGAGAGAGCGGACACGGGTCCGGTCTATGGCAAGGTGGATGTGCTGATATCAGAGC TTCTCGGCTCTTTTGGCGACAACGAGCTGTCCCCCGAATGCCTGGACGGCATCCAGCACGTGCTGGCCGAGCCGC ACGGCATTTCCATCCCAAGCTCCTACACGGCACACCTCAGCCCCGTTTCGGACCCCAAGGTCTATGCCGAGATTC TAACCAGATCGGCCGTGGACGCCACGGCCTTTGACACGCCCTGGGTCGTCCGGCTCTACGCGCTGGACTTTGTCT GTCAGCGCGTGCCGCATCACCCTCGGTTCCAGCAGGCCTGGGAGTTCTCCCACCCGATCCCAGATTCGACACTAC AGGCCATTCAATACAGGCGCTCCGGGGGCGTCGTCGGCGGTGGCGGGGGGAGCATGGCCGGGGCGGCCGGCGCCA ACGACCACAACTCGCGGTTCTGTCACTTGACCTTTGTGTGCCGCTGCCCTGGCGTCATCCACGGGCTGGCCGGAT ACTTCGAGTCGACACTGTACGAGTCGAAGCTGGAGGGGGGCGAGGGGGCGAAGGTGGAAATCAGTACGCATCCGG AGAGGATGGACAGCAAGAGCAAAGACATGGCTTCGTGGTTTCCCATCTTCTTCCCTCTGAGAGTGAGTGAAAGCG TTCGTGATCCTGTGGATGGCGATGATGACTAACTGAGTGCTACGCAGGAGCCCTTGACGTATCCCTACGACTCGG AGCTTGAGGTGAGCATGTGGCGCCAGACGGACGACACCAGGGTATGGTACGAATGGATGGTGGAGGCTTGGACGT GGATAAGCCCTACTAAACGTATCAAGATCGCCACGTCTGCCCTTTGCAGCAGCCGAAAGGTGGCCTGTCTGATGT AG |