© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophio5|3061 |
| Gene name | |
| Location | scaffold_243:4090..5200 |
| Strand | - |
| Gene length (bp) | 1110 |
| Transcript length (bp) | 1110 |
| Coding sequence length (bp) | 1107 |
| Protein length (aa) | 369 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P87170|DGK1_SCHPO | CTP-dependent diacylglycerol kinase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ptp4 PE=3 SV=1 | 125 | 359 | 8.0E-54 |
| sp|Q12382|DGK1_YEAST | CTP-dependent diacylglycerol kinase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DGK1 PE=1 SV=1 | 122 | 368 | 1.0E-52 |
| sp|Q753I3|DGK1_ASHGO | CTP-dependent diacylglycerol kinase 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DGK1 PE=3 SV=1 | 128 | 359 | 3.0E-52 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Transmembrane domain | 0.1461 | 0.2479 | 0.0946 | 0.1317 | 0.3733 | 0.0219 | 0.5331 | 0.1307 | 0.1347 | 0.0197 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 138 | 160 | 22 |
| 2 | 201 | 218 | 17 |
| 3 | 259 | 281 | 22 |
| 4 | 351 | 368 | 17 |
| Orthofinder run ID | 4 |
| Orthogroup | 3069 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|3061 MSLRRKSAVPRTPRVISPSPTPSDQDAQEYFGPTTRSAFRKRLSTSQTLEERSEDDSPPGPRRSRTRSRSPMKQM DNSTGHFSAAQPATNGHLAPPQPSTFGGWSWRDFSRSPSPLGLIPIHRHWRTFVHKHEVPRKALHVSIGFFVAWL YAVGTRVDAVPPYLMTALLPIATVDWLRHRYESVNRLYVRLLGALMRESEYSGWNGVIFYLLGAWIVLRFFPKDV GVMSVLLLSWCDSAASTFGRLWGRYTPRIRRGKSLAGSAAAFLVGVGTSYFFYAWLVPTFGPMPGDEGFMFKGTL SLPEPARAALGLADRAGRVSGALALGLVSLWSGLVASASEVVDMFGWDDNLTIPVLSGVGIMGFLKVFG |
| Coding | >Ophio5|3061 ATGTCGCTGCGGCGCAAGTCTGCCGTACCCCGGACGCCTCGCGTCATATCACCGAGTCCTACGCCTTCGGACCAG GATGCCCAGGAGTACTTTGGTCCCACCACGCGGTCGGCTTTTCGGAAACGCCTCTCGACCTCGCAGACGCTCGAG GAGCGAAGCGAGGATGATAGCCCGCCGGGGCCCCGGAGATCCCGCACGAGAAGTCGATCGCCTATGAAGCAGATG GACAACTCAACTGGCCACTTCTCCGCCGCTCAGCCAGCAACAAACGGCCATCTCGCCCCCCCGCAACCATCTACG TTCGGCGGCTGGTCGTGGCGCGACTTTAGTCGCAGCCCGAGCCCGCTGGGCCTCATTCCCATCCACCGCCACTGG CGGACCTTTGTGCACAAGCACGAGGTGCCACGCAAGGCGCTGCACGTATCCATCGGCTTCTTCGTCGCCTGGCTC TACGCCGTCGGTACGCGCGTCGATGCCGTGCCACCATACCTCATGACGGCGCTGTTGCCCATCGCCACGGTAGAC TGGCTGCGACACCGCTACGAGTCCGTCAACAGGCTGTACGTCAGGCTCCTCGGCGCCCTCATGCGCGAGAGTGAG TACTCGGGTTGGAATGGCGTCATCTTCTACCTCCTCGGCGCATGGATCGTCCTACGCTTCTTTCCCAAGGACGTC GGTGTCATGAGTGTCCTGCTCCTCAGCTGGTGCGACTCCGCCGCCAGCACTTTCGGTCGCCTCTGGGGACGGTAC ACGCCGAGGATCCGCCGCGGCAAGTCGCTGGCCGGATCGGCGGCTGCCTTCCTCGTCGGCGTCGGCACCTCCTAC TTCTTCTACGCATGGCTCGTGCCGACCTTTGGGCCCATGCCGGGCGACGAAGGCTTCATGTTCAAGGGCACCTTG TCGCTACCGGAGCCGGCCCGGGCGGCGTTGGGGCTGGCCGACCGAGCGGGCCGAGTCTCGGGCGCCCTGGCACTC GGACTCGTGAGCTTGTGGTCCGGGCTGGTGGCGTCGGCCAGCGAAGTGGTCGACATGTTTGGCTGGGATGACAAC CTCACGATACCGGTGCTCAGCGGCGTCGGCATCATGGGCTTTCTCAAGGTCTTCGGC |
| Transcript | >Ophio5|3061 ATGTCGCTGCGGCGCAAGTCTGCCGTACCCCGGACGCCTCGCGTCATATCACCGAGTCCTACGCCTTCGGACCAG GATGCCCAGGAGTACTTTGGTCCCACCACGCGGTCGGCTTTTCGGAAACGCCTCTCGACCTCGCAGACGCTCGAG GAGCGAAGCGAGGATGATAGCCCGCCGGGGCCCCGGAGATCCCGCACGAGAAGTCGATCGCCTATGAAGCAGATG GACAACTCAACTGGCCACTTCTCCGCCGCTCAGCCAGCAACAAACGGCCATCTCGCCCCCCCGCAACCATCTACG TTCGGCGGCTGGTCGTGGCGCGACTTTAGTCGCAGCCCGAGCCCGCTGGGCCTCATTCCCATCCACCGCCACTGG CGGACCTTTGTGCACAAGCACGAGGTGCCACGCAAGGCGCTGCACGTATCCATCGGCTTCTTCGTCGCCTGGCTC TACGCCGTCGGTACGCGCGTCGATGCCGTGCCACCATACCTCATGACGGCGCTGTTGCCCATCGCCACGGTAGAC TGGCTGCGACACCGCTACGAGTCCGTCAACAGGCTGTACGTCAGGCTCCTCGGCGCCCTCATGCGCGAGAGTGAG TACTCGGGTTGGAATGGCGTCATCTTCTACCTCCTCGGCGCATGGATCGTCCTACGCTTCTTTCCCAAGGACGTC GGTGTCATGAGTGTCCTGCTCCTCAGCTGGTGCGACTCCGCCGCCAGCACTTTCGGTCGCCTCTGGGGACGGTAC ACGCCGAGGATCCGCCGCGGCAAGTCGCTGGCCGGATCGGCGGCTGCCTTCCTCGTCGGCGTCGGCACCTCCTAC TTCTTCTACGCATGGCTCGTGCCGACCTTTGGGCCCATGCCGGGCGACGAAGGCTTCATGTTCAAGGGCACCTTG TCGCTACCGGAGCCGGCCCGGGCGGCGTTGGGGCTGGCCGACCGAGCGGGCCGAGTCTCGGGCGCCCTGGCACTC GGACTCGTGAGCTTGTGGTCCGGGCTGGTGGCGTCGGCCAGCGAAGTGGTCGACATGTTTGGCTGGGATGACAAC CTCACGATACCGGTGCTCAGCGGCGTCGGCATCATGGGCTTTCTCAAGGTCTTCGGCTGA |
| Gene | >Ophio5|3061 ATGTCGCTGCGGCGCAAGTCTGCCGTACCCCGGACGCCTCGCGTCATATCACCGAGTCCTACGCCTTCGGACCAG GATGCCCAGGAGTACTTTGGTCCCACCACGCGGTCGGCTTTTCGGAAACGCCTCTCGACCTCGCAGACGCTCGAG GAGCGAAGCGAGGATGATAGCCCGCCGGGGCCCCGGAGATCCCGCACGAGAAGTCGATCGCCTATGAAGCAGATG GACAACTCAACTGGCCACTTCTCCGCCGCTCAGCCAGCAACAAACGGCCATCTCGCCCCCCCGCAACCATCTACG TTCGGCGGCTGGTCGTGGCGCGACTTTAGTCGCAGCCCGAGCCCGCTGGGCCTCATTCCCATCCACCGCCACTGG CGGACCTTTGTGCACAAGCACGAGGTGCCACGCAAGGCGCTGCACGTATCCATCGGCTTCTTCGTCGCCTGGCTC TACGCCGTCGGTACGCGCGTCGATGCCGTGCCACCATACCTCATGACGGCGCTGTTGCCCATCGCCACGGTAGAC TGGCTGCGACACCGCTACGAGTCCGTCAACAGGCTGTACGTCAGGCTCCTCGGCGCCCTCATGCGCGAGAGTGAG TACTCGGGTTGGAATGGCGTCATCTTCTACCTCCTCGGCGCATGGATCGTCCTACGCTTCTTTCCCAAGGACGTC GGTGTCATGAGTGTCCTGCTCCTCAGCTGGTGCGACTCCGCCGCCAGCACTTTCGGTCGCCTCTGGGGACGGTAC ACGCCGAGGATCCGCCGCGGCAAGTCGCTGGCCGGATCGGCGGCTGCCTTCCTCGTCGGCGTCGGCACCTCCTAC TTCTTCTACGCATGGCTCGTGCCGACCTTTGGGCCCATGCCGGGCGACGAAGGCTTCATGTTCAAGGGCACCTTG TCGCTACCGGAGCCGGCCCGGGCGGCGTTGGGGCTGGCCGACCGAGCGGGCCGAGTCTCGGGCGCCCTGGCACTC GGACTCGTGAGCTTGTGGTCCGGGCTGGTGGCGTCGGCCAGCGAAGTGGTCGACATGTTTGGCTGGGATGACAAC CTCACGATACCGGTGCTCAGCGGCGTCGGCATCATGGGCTTTCTCAAGGTCTTCGGCTGA |