Protein ID | Ophio5|3043 |
Gene name | |
Location | scaffold_241:14139..16245 |
Strand | + |
Gene length (bp) | 2106 |
Transcript length (bp) | 1812 |
Coding sequence length (bp) | 1809 |
Protein length (aa) | 603 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00628 | PHD | PHD-finger | 1.0E-08 | 410 | 460 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q8IDX6|RBP2A_PLAF7 | Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum (isolate 3D7) GN=PF13_0198 PE=3 SV=1 | 243 | 407 | 3.0E-06 |
sp|Q9W0T1|NU301_DROME | Nucleosome-remodeling factor subunit NURF301 OS=Drosophila melanogaster GN=E(bx) PE=1 SV=2 | 321 | 460 | 9.0E-06 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 50 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|3043 MSSRKRPIQAVDDAAGGASGDDASTTLSRIRNMWQFANLCQWIYIFGKAAKIDESIDVEDIEADCLKPNQTLLMD LALAILKLVSSHRGLNHDIMDDQLQKQYLMRAPDRIISSGDNCSSKFADMSVFQKIVVLQQLTQWAMANPERIRD LMGEQKDADQMSWRIEPYGWDKEDRTYFVLDDNRVYRLTDRPPTQARVKPKSKSTKSRRVNRRKRGVSSRNSEND VPNSVDDGLDGRMWDFAKTRDENEKVLRQQLETHLVPILEKLEETQKRKQAQRERELLNMAKMANAKRSSRLAGK AEKRKMEEQAKEEEQKEREAEELKILDEQKRQRLERDRDFRMFSRQRRLQEREARRLQHKEDLAQLSEDSRHAST SAGRVSERRLEAEIERTKQSLQNLDREEEEWAFDCVCGLFGQVDDGNHCVACERCNVWQHSECLGISEAEADRPE FQFVCDSCKRQDGGTSGAPFKPVKLKLNPTRSSKVTGSSRTEQAQDTQSVEQRARGDDASKLQKEVSCSGASLFK DKDSAPEFGEAVSPSTARPTGSAATEPASRLTSVPAVDTREPSASSIAVKQNGHESLTRLGNGSPGATIQGSPLS TLP |
Coding | >Ophio5|3043 ATGTCTTCCCGCAAAAGGCCAATCCAAGCAGTAGATGACGCAGCTGGCGGCGCCAGCGGTGACGATGCTTCAACA ACACTGAGTCGCATCCGAAACATGTGGCAGTTCGCCAATCTTTGCCAGTGGATCTACATCTTTGGCAAGGCTGCC AAGATCGACGAGTCCATTGATGTGGAGGATATCGAGGCCGATTGTCTGAAGCCCAACCAAACCCTGCTAATGGAC CTGGCACTCGCGATCCTGAAGCTCGTATCATCCCATCGAGGGCTCAACCACGACATAATGGACGATCAGTTGCAG AAGCAGTACCTCATGAGGGCCCCGGACAGGATTATTTCTAGTGGGGATAATTGTTCCAGCAAATTTGCCGACATG AGCGTGTTCCAAAAAATCGTTGTGTTGCAGCAATTAACCCAATGGGCAATGGCAAATCCCGAGCGAATCCGCGAT TTGATGGGGGAACAAAAGGATGCAGATCAAATGAGCTGGCGGATCGAGCCCTACGGCTGGGATAAAGAGGACCGT ACCTACTTTGTCCTCGACGACAATCGGGTCTACCGACTGACAGACAGGCCCCCGACCCAAGCCCGAGTGAAGCCC AAGAGCAAGTCTACAAAGTCTCGACGAGTCAACAGACGAAAACGTGGTGTGTCATCGCGCAATTCTGAAAACGAC GTCCCAAACAGCGTCGATGATGGATTAGATGGAAGAATGTGGGACTTTGCCAAAACGCGAGACGAGAACGAGAAG GTTTTGCGACAACAGCTGGAGACGCACCTAGTTCCAATTCTGGAAAAGCTAGAAGAGACACAGAAGCGGAAGCAG GCTCAAAGGGAGCGAGAGCTGCTCAACATGGCCAAAATGGCCAATGCCAAAAGGTCCAGCCGCCTTGCCGGCAAA GCCGAGAAACGAAAAATGGAAGAACAGGCTAAAGAAGAAGAGCAGAAGGAAAGAGAAGCCGAAGAATTGAAGATA CTCGACGAGCAAAAACGGCAAAGATTGGAAAGGGATCGAGATTTCCGCATGTTCTCGCGTCAGCGTCGCTTGCAA GAGCGGGAAGCACGTCGACTTCAACACAAAGAGGACCTGGCACAGTTATCCGAGGACAGCAGACATGCGTCGACG TCAGCGGGTCGCGTCTCGGAGCGCCGTCTCGAAGCCGAAATCGAGAGGACAAAACAATCGCTCCAGAATCTTGAC CGAGAGGAGGAAGAGTGGGCCTTCGACTGCGTCTGTGGCCTGTTCGGCCAGGTGGACGACGGAAATCACTGCGTT GCGTGCGAGAGGTGCAATGTGTGGCAGCACAGTGAGTGCCTGGGAATCAGCGAGGCTGAAGCGGATCGGCCCGAG TTTCAGTTCGTCTGCGATTCGTGCAAGCGTCAAGATGGAGGAACATCTGGTGCGCCTTTCAAACCTGTCAAGCTG AAGCTCAACCCCACACGCAGTTCCAAAGTCACCGGCAGCTCTCGTACCGAACAGGCTCAGGACACACAAAGCGTG GAGCAACGTGCACGTGGCGATGACGCCTCGAAACTTCAGAAGGAGGTGTCTTGTTCAGGTGCTTCTTTGTTCAAA GACAAGGACTCGGCACCTGAGTTTGGAGAAGCTGTCTCACCATCAACGGCCAGACCTACAGGCTCCGCAGCCACA GAGCCTGCCAGCCGGCTGACGTCCGTCCCTGCCGTGGACACCAGAGAGCCCAGTGCCTCCAGCATAGCTGTGAAA CAGAATGGTCACGAGTCTCTCACGCGGCTTGGTAATGGCAGCCCAGGTGCCACGATACAAGGCAGCCCGCTCTCA ACTCTGCCC |
Transcript | >Ophio5|3043 ATGTCTTCCCGCAAAAGGCCAATCCAAGCAGTAGATGACGCAGCTGGCGGCGCCAGCGGTGACGATGCTTCAACA ACACTGAGTCGCATCCGAAACATGTGGCAGTTCGCCAATCTTTGCCAGTGGATCTACATCTTTGGCAAGGCTGCC AAGATCGACGAGTCCATTGATGTGGAGGATATCGAGGCCGATTGTCTGAAGCCCAACCAAACCCTGCTAATGGAC CTGGCACTCGCGATCCTGAAGCTCGTATCATCCCATCGAGGGCTCAACCACGACATAATGGACGATCAGTTGCAG AAGCAGTACCTCATGAGGGCCCCGGACAGGATTATTTCTAGTGGGGATAATTGTTCCAGCAAATTTGCCGACATG AGCGTGTTCCAAAAAATCGTTGTGTTGCAGCAATTAACCCAATGGGCAATGGCAAATCCCGAGCGAATCCGCGAT TTGATGGGGGAACAAAAGGATGCAGATCAAATGAGCTGGCGGATCGAGCCCTACGGCTGGGATAAAGAGGACCGT ACCTACTTTGTCCTCGACGACAATCGGGTCTACCGACTGACAGACAGGCCCCCGACCCAAGCCCGAGTGAAGCCC AAGAGCAAGTCTACAAAGTCTCGACGAGTCAACAGACGAAAACGTGGTGTGTCATCGCGCAATTCTGAAAACGAC GTCCCAAACAGCGTCGATGATGGATTAGATGGAAGAATGTGGGACTTTGCCAAAACGCGAGACGAGAACGAGAAG GTTTTGCGACAACAGCTGGAGACGCACCTAGTTCCAATTCTGGAAAAGCTAGAAGAGACACAGAAGCGGAAGCAG GCTCAAAGGGAGCGAGAGCTGCTCAACATGGCCAAAATGGCCAATGCCAAAAGGTCCAGCCGCCTTGCCGGCAAA GCCGAGAAACGAAAAATGGAAGAACAGGCTAAAGAAGAAGAGCAGAAGGAAAGAGAAGCCGAAGAATTGAAGATA CTCGACGAGCAAAAACGGCAAAGATTGGAAAGGGATCGAGATTTCCGCATGTTCTCGCGTCAGCGTCGCTTGCAA GAGCGGGAAGCACGTCGACTTCAACACAAAGAGGACCTGGCACAGTTATCCGAGGACAGCAGACATGCGTCGACG TCAGCGGGTCGCGTCTCGGAGCGCCGTCTCGAAGCCGAAATCGAGAGGACAAAACAATCGCTCCAGAATCTTGAC CGAGAGGAGGAAGAGTGGGCCTTCGACTGCGTCTGTGGCCTGTTCGGCCAGGTGGACGACGGAAATCACTGCGTT GCGTGCGAGAGGTGCAATGTGTGGCAGCACAGTGAGTGCCTGGGAATCAGCGAGGCTGAAGCGGATCGGCCCGAG TTTCAGTTCGTCTGCGATTCGTGCAAGCGTCAAGATGGAGGAACATCTGGTGCGCCTTTCAAACCTGTCAAGCTG AAGCTCAACCCCACACGCAGTTCCAAAGTCACCGGCAGCTCTCGTACCGAACAGGCTCAGGACACACAAAGCGTG GAGCAACGTGCACGTGGCGATGACGCCTCGAAACTTCAGAAGGAGGTGTCTTGTTCAGGTGCTTCTTTGTTCAAA GACAAGGACTCGGCACCTGAGTTTGGAGAAGCTGTCTCACCATCAACGGCCAGACCTACAGGCTCCGCAGCCACA GAGCCTGCCAGCCGGCTGACGTCCGTCCCTGCCGTGGACACCAGAGAGCCCAGTGCCTCCAGCATAGCTGTGAAA CAGAATGGTCACGAGTCTCTCACGCGGCTTGGTAATGGCAGCCCAGGTGCCACGATACAAGGCAGCCCGCTCTCA ACTCTGCCCTGA |
Gene | >Ophio5|3043 ATGTCTTCCCGCAAAAGGCCAATCCAAGCAGTAGATGACGCAGCTGGCGGCGCCAGCGGTGACGATGCTTCAACA ACACTGAGTCGCATCCGAAACATGTGGCAGTTCGCCAATCTTTGCCAGTGGATCTACATCTTTGGCAAGGCTGCC AAGATCGACGAGTCCATTGATGTGGAGGTTTGTGCACTTCTTGTCGCACTTTTCTCTCATCAACTTTAACTTTCT CACCAAATTTCAAGGATATCGAGGCCGATTGTCTGAAGCCCAACCAAACCCTGCTAATGGACCTGGCACTCGCGA TCCTGAAGCTCGTATCATCCCATCGAGGGCTCAAGTACGATTTCCATGGCTTGAGACCCCAAAGTTTGTGTACAA AAAAAGCTAATCAGACTTTCAGCCACGACATAATGGACGATCAGTTGCAGAAGCAGTACCTCATGAGGGCCCCGG ACAGGATTATTTCTAGTGGGGATAATTGTTCCAGCAAATTTGCCGACATGAGCGTGTTCCAAAAAGTATACCCTG TAACCTATACTACGGACTACAATTGCTAGCTCTCTGATCTAATCTCGTCTGCTTCTCGAATAGATCGTTGTGTTG CAGCAATTAACCCAATGGGCAATGGCAAATCCCGAGCGAATCCGCGATTTGATGGGGGAACAAAAGGATGCAGAT CAAATGAGCTGGGTAGTTTCGCCGATCCACCGGTTGAGTTTGCGCTGACGAAAAGCTTGGCAGCGGATCGAGCCC TACGGCTGGGATAAAGAGGACCGTACCTACTTTGTCCTCGACGACAATCGGGTCTACCGACTGACAGACAGGCCC CCGACCCAAGCCCGAGTGAAGCCCAAGAGCAAGTCTACAAAGTCTCGACGAGTCAACAGACGAAAACGTGGTGTG TCATCGCGCAATTCTGAAAACGACGTCCCAAACAGCGTCGATGATGGATTAGATGGAAGAATGTGGGAGTGTGTG GCGGTTAATCTGCAAGACGTACAAACACTGCTCGACAGCTTTGCCAAAACGCGAGACGAGAACGAGAAGGTTTTG CGACAACAGCTGGAGACGCACCTAGTTCCAATTCTGGAAAAGCTAGAAGAGACACAGAAGCGGAAGCAGGCTCAA AGGGAGCGAGAGCTGCTCAACATGGCCAAAATGGCCAATGCCAAAAGGTCCAGCCGCCTTGCCGGCAAAGCCGAG AAACGAAAAATGGAAGAACAGGCTAAAGAAGAAGAGCAGAAGGAAAGAGAAGCCGAAGAATTGAAGATACTCGAC GAGCAAAAACGGCAAAGATTGGAAAGGGATCGAGATTTCCGCATGTTCTCGCGTCAGCGTCGCTTGCAAGAGCGG GAAGCACGTCGACTTCAACACAAAGAGGACCTGGCACAGTTATCCGAGGACAGCAGACATGCGTCGACGTCAGCG GGTCGCGTCTCGGAGCGCCGTCTCGAAGCCGAAATCGAGAGGACAAAACAATCGCTCCAGAATCTTGACCGAGAG GAGGAAGAGTGGGCCTTCGACTGCGTCTGTGGCCTGTTCGGCCAGGTGGACGACGGAAATCACTGCGTTGCGTGC GAGAGGTGCAATGTGTGGCAGCACAGTGAGTGCCTGGGAATCAGCGAGGCTGAAGCGGATCGGCCCGAGTTTCAG TTCGTCTGCGATTCGTGCAAGCGTCAAGATGGAGGAACATCTGGTGCGCCTTTCAAACCTGTCAAGCTGAAGCTC AACCCCACACGCAGTTCCAAAGTCACCGGCAGCTCTCGTACCGAACAGGCTCAGGACACACAAAGCGTGGAGCAA CGTGCACGTGGCGATGACGCCTCGAAACTTCAGAAGGAGGTGTCTTGTTCAGGTGCTTCTTTGTTCAAAGACAAG GACTCGGCACCTGAGTTTGGAGAAGCTGTCTCACCATCAACGGCCAGACCTACAGGCTCCGCAGCCACAGAGCCT GCCAGCCGGCTGACGTCCGTCCCTGCCGTGGACACCAGAGAGCCCAGTGCCTCCAGCATAGCTGTGAAACAGAAT GGTCACGAGTCTCTCACGCGGCTTGGTAATGGCAGCCCAGGTGCCACGATACAAGGCAGCCCGCTCTCAACTCTG CCCTGA |