Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3043
Gene name
Locationscaffold_241:14139..16245
Strand+
Gene length (bp)2106
Transcript length (bp)1812
Coding sequence length (bp)1809
Protein length (aa) 603

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00628 PHD PHD-finger 1.0E-08 410 460

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum (isolate 3D7) GN=PF13_0198 PE=3 SV=1 243 407 3.0E-06
sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila melanogaster GN=E(bx) PE=1 SV=2 321 460 9.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 50 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3043
MSSRKRPIQAVDDAAGGASGDDASTTLSRIRNMWQFANLCQWIYIFGKAAKIDESIDVEDIEADCLKPNQTLLMD
LALAILKLVSSHRGLNHDIMDDQLQKQYLMRAPDRIISSGDNCSSKFADMSVFQKIVVLQQLTQWAMANPERIRD
LMGEQKDADQMSWRIEPYGWDKEDRTYFVLDDNRVYRLTDRPPTQARVKPKSKSTKSRRVNRRKRGVSSRNSEND
VPNSVDDGLDGRMWDFAKTRDENEKVLRQQLETHLVPILEKLEETQKRKQAQRERELLNMAKMANAKRSSRLAGK
AEKRKMEEQAKEEEQKEREAEELKILDEQKRQRLERDRDFRMFSRQRRLQEREARRLQHKEDLAQLSEDSRHAST
SAGRVSERRLEAEIERTKQSLQNLDREEEEWAFDCVCGLFGQVDDGNHCVACERCNVWQHSECLGISEAEADRPE
FQFVCDSCKRQDGGTSGAPFKPVKLKLNPTRSSKVTGSSRTEQAQDTQSVEQRARGDDASKLQKEVSCSGASLFK
DKDSAPEFGEAVSPSTARPTGSAATEPASRLTSVPAVDTREPSASSIAVKQNGHESLTRLGNGSPGATIQGSPLS
TLP
Coding >Ophio5|3043
ATGTCTTCCCGCAAAAGGCCAATCCAAGCAGTAGATGACGCAGCTGGCGGCGCCAGCGGTGACGATGCTTCAACA
ACACTGAGTCGCATCCGAAACATGTGGCAGTTCGCCAATCTTTGCCAGTGGATCTACATCTTTGGCAAGGCTGCC
AAGATCGACGAGTCCATTGATGTGGAGGATATCGAGGCCGATTGTCTGAAGCCCAACCAAACCCTGCTAATGGAC
CTGGCACTCGCGATCCTGAAGCTCGTATCATCCCATCGAGGGCTCAACCACGACATAATGGACGATCAGTTGCAG
AAGCAGTACCTCATGAGGGCCCCGGACAGGATTATTTCTAGTGGGGATAATTGTTCCAGCAAATTTGCCGACATG
AGCGTGTTCCAAAAAATCGTTGTGTTGCAGCAATTAACCCAATGGGCAATGGCAAATCCCGAGCGAATCCGCGAT
TTGATGGGGGAACAAAAGGATGCAGATCAAATGAGCTGGCGGATCGAGCCCTACGGCTGGGATAAAGAGGACCGT
ACCTACTTTGTCCTCGACGACAATCGGGTCTACCGACTGACAGACAGGCCCCCGACCCAAGCCCGAGTGAAGCCC
AAGAGCAAGTCTACAAAGTCTCGACGAGTCAACAGACGAAAACGTGGTGTGTCATCGCGCAATTCTGAAAACGAC
GTCCCAAACAGCGTCGATGATGGATTAGATGGAAGAATGTGGGACTTTGCCAAAACGCGAGACGAGAACGAGAAG
GTTTTGCGACAACAGCTGGAGACGCACCTAGTTCCAATTCTGGAAAAGCTAGAAGAGACACAGAAGCGGAAGCAG
GCTCAAAGGGAGCGAGAGCTGCTCAACATGGCCAAAATGGCCAATGCCAAAAGGTCCAGCCGCCTTGCCGGCAAA
GCCGAGAAACGAAAAATGGAAGAACAGGCTAAAGAAGAAGAGCAGAAGGAAAGAGAAGCCGAAGAATTGAAGATA
CTCGACGAGCAAAAACGGCAAAGATTGGAAAGGGATCGAGATTTCCGCATGTTCTCGCGTCAGCGTCGCTTGCAA
GAGCGGGAAGCACGTCGACTTCAACACAAAGAGGACCTGGCACAGTTATCCGAGGACAGCAGACATGCGTCGACG
TCAGCGGGTCGCGTCTCGGAGCGCCGTCTCGAAGCCGAAATCGAGAGGACAAAACAATCGCTCCAGAATCTTGAC
CGAGAGGAGGAAGAGTGGGCCTTCGACTGCGTCTGTGGCCTGTTCGGCCAGGTGGACGACGGAAATCACTGCGTT
GCGTGCGAGAGGTGCAATGTGTGGCAGCACAGTGAGTGCCTGGGAATCAGCGAGGCTGAAGCGGATCGGCCCGAG
TTTCAGTTCGTCTGCGATTCGTGCAAGCGTCAAGATGGAGGAACATCTGGTGCGCCTTTCAAACCTGTCAAGCTG
AAGCTCAACCCCACACGCAGTTCCAAAGTCACCGGCAGCTCTCGTACCGAACAGGCTCAGGACACACAAAGCGTG
GAGCAACGTGCACGTGGCGATGACGCCTCGAAACTTCAGAAGGAGGTGTCTTGTTCAGGTGCTTCTTTGTTCAAA
GACAAGGACTCGGCACCTGAGTTTGGAGAAGCTGTCTCACCATCAACGGCCAGACCTACAGGCTCCGCAGCCACA
GAGCCTGCCAGCCGGCTGACGTCCGTCCCTGCCGTGGACACCAGAGAGCCCAGTGCCTCCAGCATAGCTGTGAAA
CAGAATGGTCACGAGTCTCTCACGCGGCTTGGTAATGGCAGCCCAGGTGCCACGATACAAGGCAGCCCGCTCTCA
ACTCTGCCC
Transcript >Ophio5|3043
ATGTCTTCCCGCAAAAGGCCAATCCAAGCAGTAGATGACGCAGCTGGCGGCGCCAGCGGTGACGATGCTTCAACA
ACACTGAGTCGCATCCGAAACATGTGGCAGTTCGCCAATCTTTGCCAGTGGATCTACATCTTTGGCAAGGCTGCC
AAGATCGACGAGTCCATTGATGTGGAGGATATCGAGGCCGATTGTCTGAAGCCCAACCAAACCCTGCTAATGGAC
CTGGCACTCGCGATCCTGAAGCTCGTATCATCCCATCGAGGGCTCAACCACGACATAATGGACGATCAGTTGCAG
AAGCAGTACCTCATGAGGGCCCCGGACAGGATTATTTCTAGTGGGGATAATTGTTCCAGCAAATTTGCCGACATG
AGCGTGTTCCAAAAAATCGTTGTGTTGCAGCAATTAACCCAATGGGCAATGGCAAATCCCGAGCGAATCCGCGAT
TTGATGGGGGAACAAAAGGATGCAGATCAAATGAGCTGGCGGATCGAGCCCTACGGCTGGGATAAAGAGGACCGT
ACCTACTTTGTCCTCGACGACAATCGGGTCTACCGACTGACAGACAGGCCCCCGACCCAAGCCCGAGTGAAGCCC
AAGAGCAAGTCTACAAAGTCTCGACGAGTCAACAGACGAAAACGTGGTGTGTCATCGCGCAATTCTGAAAACGAC
GTCCCAAACAGCGTCGATGATGGATTAGATGGAAGAATGTGGGACTTTGCCAAAACGCGAGACGAGAACGAGAAG
GTTTTGCGACAACAGCTGGAGACGCACCTAGTTCCAATTCTGGAAAAGCTAGAAGAGACACAGAAGCGGAAGCAG
GCTCAAAGGGAGCGAGAGCTGCTCAACATGGCCAAAATGGCCAATGCCAAAAGGTCCAGCCGCCTTGCCGGCAAA
GCCGAGAAACGAAAAATGGAAGAACAGGCTAAAGAAGAAGAGCAGAAGGAAAGAGAAGCCGAAGAATTGAAGATA
CTCGACGAGCAAAAACGGCAAAGATTGGAAAGGGATCGAGATTTCCGCATGTTCTCGCGTCAGCGTCGCTTGCAA
GAGCGGGAAGCACGTCGACTTCAACACAAAGAGGACCTGGCACAGTTATCCGAGGACAGCAGACATGCGTCGACG
TCAGCGGGTCGCGTCTCGGAGCGCCGTCTCGAAGCCGAAATCGAGAGGACAAAACAATCGCTCCAGAATCTTGAC
CGAGAGGAGGAAGAGTGGGCCTTCGACTGCGTCTGTGGCCTGTTCGGCCAGGTGGACGACGGAAATCACTGCGTT
GCGTGCGAGAGGTGCAATGTGTGGCAGCACAGTGAGTGCCTGGGAATCAGCGAGGCTGAAGCGGATCGGCCCGAG
TTTCAGTTCGTCTGCGATTCGTGCAAGCGTCAAGATGGAGGAACATCTGGTGCGCCTTTCAAACCTGTCAAGCTG
AAGCTCAACCCCACACGCAGTTCCAAAGTCACCGGCAGCTCTCGTACCGAACAGGCTCAGGACACACAAAGCGTG
GAGCAACGTGCACGTGGCGATGACGCCTCGAAACTTCAGAAGGAGGTGTCTTGTTCAGGTGCTTCTTTGTTCAAA
GACAAGGACTCGGCACCTGAGTTTGGAGAAGCTGTCTCACCATCAACGGCCAGACCTACAGGCTCCGCAGCCACA
GAGCCTGCCAGCCGGCTGACGTCCGTCCCTGCCGTGGACACCAGAGAGCCCAGTGCCTCCAGCATAGCTGTGAAA
CAGAATGGTCACGAGTCTCTCACGCGGCTTGGTAATGGCAGCCCAGGTGCCACGATACAAGGCAGCCCGCTCTCA
ACTCTGCCCTGA
Gene >Ophio5|3043
ATGTCTTCCCGCAAAAGGCCAATCCAAGCAGTAGATGACGCAGCTGGCGGCGCCAGCGGTGACGATGCTTCAACA
ACACTGAGTCGCATCCGAAACATGTGGCAGTTCGCCAATCTTTGCCAGTGGATCTACATCTTTGGCAAGGCTGCC
AAGATCGACGAGTCCATTGATGTGGAGGTTTGTGCACTTCTTGTCGCACTTTTCTCTCATCAACTTTAACTTTCT
CACCAAATTTCAAGGATATCGAGGCCGATTGTCTGAAGCCCAACCAAACCCTGCTAATGGACCTGGCACTCGCGA
TCCTGAAGCTCGTATCATCCCATCGAGGGCTCAAGTACGATTTCCATGGCTTGAGACCCCAAAGTTTGTGTACAA
AAAAAGCTAATCAGACTTTCAGCCACGACATAATGGACGATCAGTTGCAGAAGCAGTACCTCATGAGGGCCCCGG
ACAGGATTATTTCTAGTGGGGATAATTGTTCCAGCAAATTTGCCGACATGAGCGTGTTCCAAAAAGTATACCCTG
TAACCTATACTACGGACTACAATTGCTAGCTCTCTGATCTAATCTCGTCTGCTTCTCGAATAGATCGTTGTGTTG
CAGCAATTAACCCAATGGGCAATGGCAAATCCCGAGCGAATCCGCGATTTGATGGGGGAACAAAAGGATGCAGAT
CAAATGAGCTGGGTAGTTTCGCCGATCCACCGGTTGAGTTTGCGCTGACGAAAAGCTTGGCAGCGGATCGAGCCC
TACGGCTGGGATAAAGAGGACCGTACCTACTTTGTCCTCGACGACAATCGGGTCTACCGACTGACAGACAGGCCC
CCGACCCAAGCCCGAGTGAAGCCCAAGAGCAAGTCTACAAAGTCTCGACGAGTCAACAGACGAAAACGTGGTGTG
TCATCGCGCAATTCTGAAAACGACGTCCCAAACAGCGTCGATGATGGATTAGATGGAAGAATGTGGGAGTGTGTG
GCGGTTAATCTGCAAGACGTACAAACACTGCTCGACAGCTTTGCCAAAACGCGAGACGAGAACGAGAAGGTTTTG
CGACAACAGCTGGAGACGCACCTAGTTCCAATTCTGGAAAAGCTAGAAGAGACACAGAAGCGGAAGCAGGCTCAA
AGGGAGCGAGAGCTGCTCAACATGGCCAAAATGGCCAATGCCAAAAGGTCCAGCCGCCTTGCCGGCAAAGCCGAG
AAACGAAAAATGGAAGAACAGGCTAAAGAAGAAGAGCAGAAGGAAAGAGAAGCCGAAGAATTGAAGATACTCGAC
GAGCAAAAACGGCAAAGATTGGAAAGGGATCGAGATTTCCGCATGTTCTCGCGTCAGCGTCGCTTGCAAGAGCGG
GAAGCACGTCGACTTCAACACAAAGAGGACCTGGCACAGTTATCCGAGGACAGCAGACATGCGTCGACGTCAGCG
GGTCGCGTCTCGGAGCGCCGTCTCGAAGCCGAAATCGAGAGGACAAAACAATCGCTCCAGAATCTTGACCGAGAG
GAGGAAGAGTGGGCCTTCGACTGCGTCTGTGGCCTGTTCGGCCAGGTGGACGACGGAAATCACTGCGTTGCGTGC
GAGAGGTGCAATGTGTGGCAGCACAGTGAGTGCCTGGGAATCAGCGAGGCTGAAGCGGATCGGCCCGAGTTTCAG
TTCGTCTGCGATTCGTGCAAGCGTCAAGATGGAGGAACATCTGGTGCGCCTTTCAAACCTGTCAAGCTGAAGCTC
AACCCCACACGCAGTTCCAAAGTCACCGGCAGCTCTCGTACCGAACAGGCTCAGGACACACAAAGCGTGGAGCAA
CGTGCACGTGGCGATGACGCCTCGAAACTTCAGAAGGAGGTGTCTTGTTCAGGTGCTTCTTTGTTCAAAGACAAG
GACTCGGCACCTGAGTTTGGAGAAGCTGTCTCACCATCAACGGCCAGACCTACAGGCTCCGCAGCCACAGAGCCT
GCCAGCCGGCTGACGTCCGTCCCTGCCGTGGACACCAGAGAGCCCAGTGCCTCCAGCATAGCTGTGAAACAGAAT
GGTCACGAGTCTCTCACGCGGCTTGGTAATGGCAGCCCAGGTGCCACGATACAAGGCAGCCCGCTCTCAACTCTG
CCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail