© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|3016 |
| Gene name | |
| Location | scaffold_24:51295..52008 |
| Strand | - |
| Gene length (bp) | 713 |
| Transcript length (bp) | 552 |
| Coding sequence length (bp) | 549 |
| Protein length (aa) | 183 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00583 | Acetyltransf_1 | Acetyltransferase (GNAT) family | 1.0E-06 | 72 | 153 |
| PF13673 | Acetyltransf_10 | Acetyltransferase (GNAT) domain | 9.2E-07 | 65 | 158 |
| PF08445 | FR47 | FR47-like protein | 2.4E-05 | 102 | 155 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P16966|TTR_PSEAJ | Acetyltransferase OS=Pseudomonas amygdali pv. tabaci GN=ttr PE=1 SV=1 | 7 | 180 | 2.0E-12 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008080 | N-acetyltransferase activity | Yes |
| GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | Yes |
| GO:0016746 | acyltransferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| GO:0016410 | N-acyltransferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016407 | acetyltransferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|3016 MHASCITHDRAMATFLPPLSHEKLLAWWKERMAEVGSGTRLMWMLVRGGEAAATTTTTTGKEEEVEEQAAAVGVV AGPDVVGVVMMALPFSETGALRAGVEKLLVHRAFRRRGGARALMGALEAEAARLGRSLLLLDTETDSPAEAVCKK LGYVELGRIPMYGISPSGDLRDGTFFYKHLTLS |
| Coding | >Ophio5|3016 ATGCACGCATCATGCATCACGCACGACCGGGCCATGGCGACCTTCCTCCCGCCGCTATCGCATGAGAAGCTGCTG GCGTGGTGGAAGGAGAGGATGGCCGAGGTGGGAAGCGGCACACGACTAATGTGGATGTTGGTGCGCGGGGGGGAG GCGGCGGCGACGACGACGACGACGACGGGAAAAGAAGAAGAGGTGGAAGAGCAAGCGGCGGCCGTTGGGGTGGTG GCGGGTCCGGACGTGGTCGGCGTCGTCATGATGGCTTTGCCCTTTTCCGAGACGGGGGCTTTGCGGGCTGGTGTT GAGAAGTTGCTGGTTCATAGGGCCTTTCGGAGGAGGGGGGGTGCGAGGGCTTTGATGGGCGCTTTGGAGGCTGAG GCGGCGAGGTTGGGGCGGAGTTTGCTGCTCCTCGATACCGAGACGGACAGCCCCGCCGAAGCCGTTTGCAAAAAG CTCGGCTACGTCGAACTCGGAAGAATACCAATGTATGGAATCAGCCCGTCGGGAGACCTGCGGGACGGCACTTTC TTCTACAAGCATCTGACGCTGTCG |
| Transcript | >Ophio5|3016 ATGCACGCATCATGCATCACGCACGACCGGGCCATGGCGACCTTCCTCCCGCCGCTATCGCATGAGAAGCTGCTG GCGTGGTGGAAGGAGAGGATGGCCGAGGTGGGAAGCGGCACACGACTAATGTGGATGTTGGTGCGCGGGGGGGAG GCGGCGGCGACGACGACGACGACGACGGGAAAAGAAGAAGAGGTGGAAGAGCAAGCGGCGGCCGTTGGGGTGGTG GCGGGTCCGGACGTGGTCGGCGTCGTCATGATGGCTTTGCCCTTTTCCGAGACGGGGGCTTTGCGGGCTGGTGTT GAGAAGTTGCTGGTTCATAGGGCCTTTCGGAGGAGGGGGGGTGCGAGGGCTTTGATGGGCGCTTTGGAGGCTGAG GCGGCGAGGTTGGGGCGGAGTTTGCTGCTCCTCGATACCGAGACGGACAGCCCCGCCGAAGCCGTTTGCAAAAAG CTCGGCTACGTCGAACTCGGAAGAATACCAATGTATGGAATCAGCCCGTCGGGAGACCTGCGGGACGGCACTTTC TTCTACAAGCATCTGACGCTGTCGTGA |
| Gene | >Ophio5|3016 ATGCACGCATCATGCATCACGCACGACCGGGCCATGGCGACCTTCCTCCCGCCGCTATCGCATGAGAAGCTGCTG GCGTGGTGGAAGGAGAGGATGGCCGAGGTGGGAAGCGGCACACGACTAATGTGGATGTTGGTGCGCGGGGGGGAG GCGGCGGCGACGACGACGACGACGACGGGAAAAGAAGAAGAGGTGGAAGAGCAAGCGGCGGCCGTTGGGGTGGTG GCGGGTCCGGACGTGGTCGGCGTCGTCATGATGGCTTTGCCCTTTTCCGAGACGGGGGCTTTGCGGGCTGGTGTT GAGAAGTTGCTGGTTCATAGGGCCTTTCGGAGGAGGGGGGGTGCGAGGGCTTTGATGGGCGCTTTGGAGGCTGAG GCGGCGAGGTTGGGGCGGAGTTTGCTGGTAGGTCTTTCTTCTCCTCTTTCTCTCTCTCTCTCTCTCTCTCCCTCT CTCTCTCCCTCTCTCACGAACCCATCTGTCATCCCTCCCTCCCTCCCTCTCCCCTCGTCTTCGTGTTCCAATATC AGACAAGTCTTCCCGTCTGACCGACCGACCCGTCACAGCTCCTCGATACCGAGACGGACAGCCCCGCCGAAGCCG TTTGCAAAAAGCTCGGCTACGTCGAACTCGGAAGAATACCAATGTATGGAATCAGCCCGTCGGGAGACCTGCGGG ACGGCACTTTCTTCTACAAGCATCTGACGCTGTCGTGA |