Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2997
Gene name
Locationscaffold_239:22002..23708
Strand+
Gene length (bp)1706
Transcript length (bp)1653
Coding sequence length (bp)1650
Protein length (aa) 550

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10361 DUF2434 Protein of unknown function (DUF2434) 7.4E-132 45 338

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q10260|YD2C_SCHPO Uncharacterized protein C56F8.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC56F8.12 PE=4 SV=1 30 390 3.0E-22

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

Domain # Start End Length
1 91 113 22
2 133 155 22
3 165 187 22
4 217 239 22
5 264 286 22
6 306 328 22
7 343 365 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2997
MAVPLNLLRARELLAFPSGDNDTDTVLAGNHFNLTTLREWNYTLFSNQTLSNGTRCWLTLQPYQPDFLLSNGTFV
NATKCWVAIEPIGTRGVVGIVLAAVYGIALVLTLAALTKHGKMYLPKETRFYPIGRRWQWYWAGFVCSCALISLL
ANIDVDRYYIQELPIVLTGFFWFLICQGTMALTWEAVRHWGSWLERQYVDPNPFVYRQDDRRAMVEFWLPLWFYF
WVWMNFFLVIPRGWGFVEKQRSPEQTQVVAIPTATGGRFKGGGFCLFIAWLIIIYSLRHSIHHYKPRNRGILNRA
IGLVRVVPLRFILMIPLCLALIAYQVLISFDWEFSVLRFEGMVIPVVFAWGYGPTLLIVFIQIVYGFVTPNEDKE
LLRQRRERGDEVNRELGIVKRPAWWRRVRGDHIAVPLRERIQKNVAEVGGERGVGRRVEDDVERHARLEAMRSAV
NDDGDMELRNVAPRPFVDGAPRIGLPEQRQPASFLLPEIGETMAETERVQRLASLLEGGSPPPYSDRSARRASEP
ETEPSTPSDTMSEPRQPKVRSMLDV
Coding >Ophio5|2997
ATGGCCGTCCCTCTCAACCTCCTCCGCGCGCGCGAACTCCTCGCCTTTCCGTCTGGAGACAACGACACCGACACC
GTCCTGGCCGGAAACCACTTCAACCTGACGACGTTGCGGGAGTGGAACTACACGCTGTTCAGTAACCAGACGCTC
TCCAACGGCACCCGCTGCTGGCTCACCCTGCAGCCCTACCAGCCCGACTTCTTGCTCAGCAACGGCACCTTTGTC
AACGCCACAAAGTGCTGGGTCGCCATCGAACCCATCGGCACTCGAGGCGTCGTGGGCATCGTGCTCGCCGCTGTC
TACGGCATCGCTCTTGTTCTCACCCTCGCAGCCCTGACCAAGCATGGCAAAATGTACCTGCCCAAGGAGACGCGC
TTTTATCCCATCGGCCGCCGCTGGCAGTGGTACTGGGCTGGCTTTGTCTGCAGCTGCGCCCTCATCAGTCTGCTG
GCAAACATCGACGTCGACCGCTACTATATCCAGGAGCTGCCCATCGTTCTCACTGGTTTCTTCTGGTTCCTCATC
TGCCAGGGTACCATGGCACTGACGTGGGAGGCCGTCCGTCACTGGGGCAGCTGGCTGGAGCGCCAGTACGTCGAT
CCGAACCCGTTTGTCTATCGCCAGGATGACCGTCGAGCCATGGTCGAGTTTTGGCTGCCACTGTGGTTTTACTTT
TGGGTCTGGATGAACTTCTTCCTCGTCATCCCTCGGGGCTGGGGATTCGTTGAGAAGCAGCGGTCCCCCGAGCAG
ACTCAGGTTGTGGCCATCCCGACGGCCACGGGCGGGCGCTTCAAGGGCGGCGGCTTCTGCCTCTTCATCGCCTGG
CTCATCATCATCTACTCGCTGCGGCACTCCATCCATCACTACAAGCCGCGCAACCGCGGCATCCTGAACCGCGCC
ATCGGCCTCGTTCGCGTCGTGCCGTTGCGCTTTATCCTCATGATTCCGTTATGCCTGGCGCTCATCGCGTACCAG
GTGCTCATCTCCTTTGACTGGGAGTTTTCCGTCCTCCGGTTCGAAGGCATGGTAATACCGGTCGTCTTCGCGTGG
GGCTACGGCCCGACGCTACTCATTGTGTTTATCCAGATTGTCTACGGCTTCGTGACGCCCAACGAGGACAAGGAG
CTCCTGCGGCAGCGCAGAGAGCGCGGCGATGAGGTCAATCGCGAGCTGGGCATCGTCAAGCGGCCAGCGTGGTGG
CGGCGCGTAAGGGGAGATCACATCGCCGTCCCGCTACGCGAAAGGATCCAAAAGAACGTGGCCGAAGTGGGTGGC
GAGCGCGGCGTCGGTCGTCGCGTCGAAGATGACGTGGAGCGACACGCCAGGCTCGAGGCGATGCGTTCGGCCGTG
AACGATGATGGCGACATGGAGCTGCGGAACGTGGCACCTCGGCCATTCGTCGACGGAGCACCTCGTATCGGTCTC
CCAGAACAGCGGCAGCCGGCCAGCTTCTTGCTTCCCGAAATCGGCGAGACGATGGCAGAGACGGAGCGGGTGCAG
CGGCTGGCGTCCCTTTTGGAAGGGGGTTCGCCGCCGCCGTACAGCGACAGAAGCGCGAGGCGGGCGTCGGAGCCG
GAGACGGAGCCGAGCACGCCGTCGGACACCATGTCGGAGCCGAGGCAGCCCAAGGTGCGGAGCATGCTGGACGTG
Transcript >Ophio5|2997
ATGGCCGTCCCTCTCAACCTCCTCCGCGCGCGCGAACTCCTCGCCTTTCCGTCTGGAGACAACGACACCGACACC
GTCCTGGCCGGAAACCACTTCAACCTGACGACGTTGCGGGAGTGGAACTACACGCTGTTCAGTAACCAGACGCTC
TCCAACGGCACCCGCTGCTGGCTCACCCTGCAGCCCTACCAGCCCGACTTCTTGCTCAGCAACGGCACCTTTGTC
AACGCCACAAAGTGCTGGGTCGCCATCGAACCCATCGGCACTCGAGGCGTCGTGGGCATCGTGCTCGCCGCTGTC
TACGGCATCGCTCTTGTTCTCACCCTCGCAGCCCTGACCAAGCATGGCAAAATGTACCTGCCCAAGGAGACGCGC
TTTTATCCCATCGGCCGCCGCTGGCAGTGGTACTGGGCTGGCTTTGTCTGCAGCTGCGCCCTCATCAGTCTGCTG
GCAAACATCGACGTCGACCGCTACTATATCCAGGAGCTGCCCATCGTTCTCACTGGTTTCTTCTGGTTCCTCATC
TGCCAGGGTACCATGGCACTGACGTGGGAGGCCGTCCGTCACTGGGGCAGCTGGCTGGAGCGCCAGTACGTCGAT
CCGAACCCGTTTGTCTATCGCCAGGATGACCGTCGAGCCATGGTCGAGTTTTGGCTGCCACTGTGGTTTTACTTT
TGGGTCTGGATGAACTTCTTCCTCGTCATCCCTCGGGGCTGGGGATTCGTTGAGAAGCAGCGGTCCCCCGAGCAG
ACTCAGGTTGTGGCCATCCCGACGGCCACGGGCGGGCGCTTCAAGGGCGGCGGCTTCTGCCTCTTCATCGCCTGG
CTCATCATCATCTACTCGCTGCGGCACTCCATCCATCACTACAAGCCGCGCAACCGCGGCATCCTGAACCGCGCC
ATCGGCCTCGTTCGCGTCGTGCCGTTGCGCTTTATCCTCATGATTCCGTTATGCCTGGCGCTCATCGCGTACCAG
GTGCTCATCTCCTTTGACTGGGAGTTTTCCGTCCTCCGGTTCGAAGGCATGGTAATACCGGTCGTCTTCGCGTGG
GGCTACGGCCCGACGCTACTCATTGTGTTTATCCAGATTGTCTACGGCTTCGTGACGCCCAACGAGGACAAGGAG
CTCCTGCGGCAGCGCAGAGAGCGCGGCGATGAGGTCAATCGCGAGCTGGGCATCGTCAAGCGGCCAGCGTGGTGG
CGGCGCGTAAGGGGAGATCACATCGCCGTCCCGCTACGCGAAAGGATCCAAAAGAACGTGGCCGAAGTGGGTGGC
GAGCGCGGCGTCGGTCGTCGCGTCGAAGATGACGTGGAGCGACACGCCAGGCTCGAGGCGATGCGTTCGGCCGTG
AACGATGATGGCGACATGGAGCTGCGGAACGTGGCACCTCGGCCATTCGTCGACGGAGCACCTCGTATCGGTCTC
CCAGAACAGCGGCAGCCGGCCAGCTTCTTGCTTCCCGAAATCGGCGAGACGATGGCAGAGACGGAGCGGGTGCAG
CGGCTGGCGTCCCTTTTGGAAGGGGGTTCGCCGCCGCCGTACAGCGACAGAAGCGCGAGGCGGGCGTCGGAGCCG
GAGACGGAGCCGAGCACGCCGTCGGACACCATGTCGGAGCCGAGGCAGCCCAAGGTGCGGAGCATGCTGGACGTG
TAG
Gene >Ophio5|2997
ATGGCCGTCCCTCTCAACCTCCTCCGCGCGCGCGAACTCCTCGCCTTTCCGTCTGGAGACAACGACACCGACACC
GTCCTGGCCGGAAACCACTTCAACCTGACGACGTTGCGGGAGTGGAACTACACGCTGTTCAGTAACCAGACGCTC
TCCAACGGCACCCGCTGCTGGCTCACCCTGCAGCCCTACCAGCCCGACTTCTTGCTCAGCAACGGCACCTTTGTC
AACGCCACAAAGTGCTGGGTCGCCATCGAACCCATCGGCACTCGAGGCGTCGTGGGCATCGTGCTCGCCGCTGTC
TACGGCATCGCTCTTGTTCTCACCCTCGCAGCCCTGACCAAGCATGGCAAAATGTACCTGCCCAAGGAGACGCGC
TTTTATCCCATCGGCCGCCGCTGGCAGTGGTACTGGGCTGGCTTTGTCTGCAGCTGCGCCCTCATCAGTCTGCTG
GCAAACATCGACGTCGACCGCTACTATATCCAGGAGCTGCCCATCGTTCTCACTGGTTTCTTCTGGTTCCTCATC
TGCCAGGGTACCATGGCACTGACGTGGGAGGCCGTCCGTCACTGGGGCAGCTGGCTGGAGCGCCAGTACGTCGAT
CCGAACCCGTTTGTCTATCGCCAGGATGACCGTCGAGCCATGGTCGAGTTTTGGCTGCCACTGTGGTTTTACTTT
TGGGTCTGGATGGTAGGCTTATCTGGCTTGCCGTGTTCGACTGTCGATGCTGACGCTTCTGACAGAACTTCTTCC
TCGTCATCCCTCGGGGCTGGGGATTCGTTGAGAAGCAGCGGTCCCCCGAGCAGACTCAGGTTGTGGCCATCCCGA
CGGCCACGGGCGGGCGCTTCAAGGGCGGCGGCTTCTGCCTCTTCATCGCCTGGCTCATCATCATCTACTCGCTGC
GGCACTCCATCCATCACTACAAGCCGCGCAACCGCGGCATCCTGAACCGCGCCATCGGCCTCGTTCGCGTCGTGC
CGTTGCGCTTTATCCTCATGATTCCGTTATGCCTGGCGCTCATCGCGTACCAGGTGCTCATCTCCTTTGACTGGG
AGTTTTCCGTCCTCCGGTTCGAAGGCATGGTAATACCGGTCGTCTTCGCGTGGGGCTACGGCCCGACGCTACTCA
TTGTGTTTATCCAGATTGTCTACGGCTTCGTGACGCCCAACGAGGACAAGGAGCTCCTGCGGCAGCGCAGAGAGC
GCGGCGATGAGGTCAATCGCGAGCTGGGCATCGTCAAGCGGCCAGCGTGGTGGCGGCGCGTAAGGGGAGATCACA
TCGCCGTCCCGCTACGCGAAAGGATCCAAAAGAACGTGGCCGAAGTGGGTGGCGAGCGCGGCGTCGGTCGTCGCG
TCGAAGATGACGTGGAGCGACACGCCAGGCTCGAGGCGATGCGTTCGGCCGTGAACGATGATGGCGACATGGAGC
TGCGGAACGTGGCACCTCGGCCATTCGTCGACGGAGCACCTCGTATCGGTCTCCCAGAACAGCGGCAGCCGGCCA
GCTTCTTGCTTCCCGAAATCGGCGAGACGATGGCAGAGACGGAGCGGGTGCAGCGGCTGGCGTCCCTTTTGGAAG
GGGGTTCGCCGCCGCCGTACAGCGACAGAAGCGCGAGGCGGGCGTCGGAGCCGGAGACGGAGCCGAGCACGCCGT
CGGACACCATGTCGGAGCCGAGGCAGCCCAAGGTGCGGAGCATGCTGGACGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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