© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|2985 |
| Gene name | |
| Location | scaffold_238:15095..16625 |
| Strand | - |
| Gene length (bp) | 1530 |
| Transcript length (bp) | 1359 |
| Coding sequence length (bp) | 1356 |
| Protein length (aa) | 452 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05193 | Peptidase_M16_C | Peptidase M16 inactive domain | 6.0E-12 | 194 | 372 |
| PF00675 | Peptidase_M16 | Insulinase (Peptidase family M16) | 9.0E-12 | 43 | 183 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O60044|QCR2_NEUCR | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=qcr-2 PE=2 SV=2 | 1 | 452 | 1.0E-162 |
| sp|P78761|QCR2_SCHPO | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=qcr2 PE=2 SV=2 | 16 | 448 | 4.0E-66 |
| sp|Q6C2E3|QCR2_YARLI | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=QCR2 PE=3 SV=1 | 33 | 448 | 1.0E-60 |
| sp|P83782|QCR2_CANAL | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=QCR2 PE=1 SV=2 | 39 | 448 | 8.0E-34 |
| sp|Q75CW5|QCR2_ASHGO | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=QCR2 PE=3 SV=2 | 41 | 273 | 2.0E-31 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O60044|QCR2_NEUCR | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=qcr-2 PE=2 SV=2 | 1 | 452 | 1.0E-162 |
| sp|P78761|QCR2_SCHPO | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=qcr2 PE=2 SV=2 | 16 | 448 | 4.0E-66 |
| sp|Q6C2E3|QCR2_YARLI | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=QCR2 PE=3 SV=1 | 33 | 448 | 1.0E-60 |
| sp|P83782|QCR2_CANAL | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=QCR2 PE=1 SV=2 | 39 | 448 | 8.0E-34 |
| sp|Q75CW5|QCR2_ASHGO | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=QCR2 PE=3 SV=2 | 41 | 273 | 2.0E-31 |
| sp|Q6BPY6|QCR2_DEBHA | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=QCR2 PE=3 SV=1 | 41 | 357 | 2.0E-28 |
| sp|P07257|QCR2_YEAST | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QCR2 PE=1 SV=1 | 33 | 448 | 2.0E-28 |
| sp|Q6CWJ6|QCR2_KLULA | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=QCR2 PE=3 SV=1 | 43 | 380 | 9.0E-27 |
| sp|Q6FSJ3|QCR2_CANGA | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=QCR2 PE=3 SV=1 | 43 | 376 | 4.0E-25 |
| sp|P22695|QCR2_HUMAN | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Homo sapiens GN=UQCRC2 PE=1 SV=3 | 39 | 448 | 2.0E-24 |
| sp|Q9DB77|QCR2_MOUSE | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus GN=Uqcrc2 PE=1 SV=1 | 39 | 448 | 3.0E-24 |
| sp|P32551|QCR2_RAT | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus GN=Uqcrc2 PE=1 SV=2 | 39 | 448 | 6.0E-23 |
| sp|P23004|QCR2_BOVIN | Cytochrome b-c1 complex subunit 2, mitochondrial OS=Bos taurus GN=UQCRC2 PE=1 SV=2 | 39 | 448 | 9.0E-23 |
| sp|Q9ZU25|MPPA1_ARATH | Probable mitochondrial-processing peptidase subunit alpha-1 OS=Arabidopsis thaliana GN=At1g51980 PE=2 SV=1 | 39 | 451 | 4.0E-18 |
| sp|Q54F93|MPPA2_DICDI | Mitochondrial-processing peptidase subunit alpha-2 OS=Dictyostelium discoideum GN=mppA2 PE=1 SV=1 | 39 | 439 | 1.0E-16 |
| sp|P29677|MPPA_SOLTU | Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1 | 16 | 446 | 7.0E-16 |
| sp|P11914|MPPA_YEAST | Mitochondrial-processing peptidase subunit alpha OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAS2 PE=1 SV=1 | 21 | 438 | 1.0E-14 |
| sp|Q3SZ71|MPPB_BOVIN | Mitochondrial-processing peptidase subunit beta OS=Bos taurus GN=PMPCB PE=2 SV=1 | 39 | 369 | 4.0E-14 |
| sp|O04308|MPPA2_ARATH | Probable mitochondrial-processing peptidase subunit alpha-2 OS=Arabidopsis thaliana GN=MPPA2 PE=1 SV=1 | 39 | 448 | 8.0E-14 |
| sp|O75439|MPPB_HUMAN | Mitochondrial-processing peptidase subunit beta OS=Homo sapiens GN=PMPCB PE=1 SV=2 | 39 | 369 | 1.0E-13 |
| sp|Q5REK3|MPPB_PONAB | Mitochondrial-processing peptidase subunit beta OS=Pongo abelii GN=PMPCB PE=2 SV=1 | 39 | 369 | 2.0E-13 |
| sp|Q9CXT8|MPPB_MOUSE | Mitochondrial-processing peptidase subunit beta OS=Mus musculus GN=Pmpcb PE=1 SV=1 | 39 | 369 | 2.0E-13 |
| sp|P43264|QCR1_EUGGR | Ubiquinol-cytochrome-c reductase complex core protein I, mitochondrial OS=Euglena gracilis PE=2 SV=1 | 39 | 309 | 2.0E-12 |
| sp|Q03346|MPPB_RAT | Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus GN=Pmpcb PE=1 SV=3 | 39 | 369 | 4.0E-12 |
| sp|P23955|MPPA_NEUCR | Mitochondrial-processing peptidase subunit alpha OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mpp PE=1 SV=2 | 39 | 243 | 5.0E-12 |
| sp|Q9Y8B5|MPPB_LENED | Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes GN=mppB PE=3 SV=1 | 7 | 241 | 1.0E-11 |
| sp|Q68FY0|QCR1_RAT | Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus GN=Uqcrc1 PE=1 SV=1 | 6 | 342 | 8.0E-11 |
| sp|Q9CZ13|QCR1_MOUSE | Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus GN=Uqcrc1 PE=1 SV=2 | 39 | 342 | 4.0E-10 |
| sp|Q42290|MPPB_ARATH | Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=2 SV=2 | 39 | 443 | 4.0E-10 |
| sp|Q86A84|MPPA1_DICDI | Mitochondrial-processing peptidase subunit alpha-1 OS=Dictyostelium discoideum GN=mppA1 PE=1 SV=1 | 39 | 237 | 1.0E-09 |
| sp|P31800|QCR1_BOVIN | Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus GN=UQCRC1 PE=1 SV=2 | 39 | 219 | 3.0E-09 |
| sp|P31930|QCR1_HUMAN | Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens GN=UQCRC1 PE=1 SV=3 | 39 | 219 | 3.0E-08 |
| sp|Q4W6B5|MPPB_DICDI | Mitochondrial-processing peptidase subunit beta OS=Dictyostelium discoideum GN=mppB PE=1 SV=1 | 39 | 242 | 3.0E-08 |
| sp|Q10713|MPPA_HUMAN | Mitochondrial-processing peptidase subunit alpha OS=Homo sapiens GN=PMPCA PE=1 SV=2 | 19 | 443 | 3.0E-08 |
| sp|P11913|MPPB_NEUCR | Mitochondrial-processing peptidase subunit beta OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=pep PE=1 SV=1 | 21 | 240 | 2.0E-07 |
| sp|Q5R513|MPPA_PONAB | Mitochondrial-processing peptidase subunit alpha OS=Pongo abelii GN=PMPCA PE=2 SV=2 | 19 | 443 | 2.0E-07 |
| sp|O94745|MPPA_SCHPO | Probable mitochondrial-processing peptidase subunit alpha OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mas2 PE=3 SV=2 | 55 | 256 | 5.0E-07 |
| sp|Q9DC61|MPPA_MOUSE | Mitochondrial-processing peptidase subunit alpha OS=Mus musculus GN=Pmpca PE=1 SV=1 | 19 | 443 | 2.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 157.29 | 82.91 | 231.68 |
| CcL | In ants, during behavior modification | 210.25 | 102.95 | 317.54 |
| CcD | In ants, recently dead | 252.66 | 124.27 | 381.05 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 0.248789 | no |
| SC16a | CcD | 0.045635 | yes |
| CcL | CcD | 0.504589 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|2985 MISRSALARHAQQAARLSLPRRGFAAAASTGAFETSEISGLRVASRDVHGPTTKLAVIVKAGTRYQPLPGLTVGL GEFAFKTTQRRSALRIQRESELLGGQLAVSHTREVLLLEASFLREDLPFFTELLAEVVSMTKYTTHELHEDVERV LPLKQAALQADASSLALDHAHAVAFHTGLGAPIYPSSLAPYRKYLNEEYIASYADLVYSKPNFTVVADGASPTNM SKWISQFFANVPASSQSGQTLKVEASKYHGGEQRTDHAGGNSMVIAFPGSDMAGSKPEIPVLASLLGGKPTIKWA PGFSLLCKACAGLPNLSVSASNMAYSDAGLMAVQLSGSASSVRKAAEATAQALKSIAGGSVKKENVSRAVANAKF EALDRAQLRDNGILLTGSGIVTRGKPSDMTELVRGFDSVTYEKVIATAKSLLGGKATVSTAGDLFVLPYADELGF KV |
| Coding | >Ophio5|2985 ATGATTTCGAGATCCGCGCTCGCAAGACACGCGCAGCAGGCAGCTCGGCTCTCCTTGCCGCGTCGTGGCTTTGCC GCCGCTGCCTCGACGGGAGCTTTCGAAACTTCGGAGATATCCGGTCTGAGAGTCGCTTCGAGGGATGTCCATGGC CCGACGACGAAGCTGGCCGTCATTGTCAAGGCCGGCACCCGATATCAACCTTTGCCCGGCCTGACTGTTGGCCTG GGAGAGTTCGCCTTCAAGACCACGCAGAGACGATCTGCTCTTCGTATACAGCGCGAGTCCGAGCTTCTCGGCGGT CAATTGGCTGTCTCGCACACCCGCGAGGTCCTCCTCCTTGAGGCCAGCTTCCTCCGCGAGGATCTGCCCTTCTTC ACCGAACTGCTGGCCGAGGTCGTGTCCATGACCAAGTATACGACACACGAGCTTCACGAAGACGTCGAGAGGGTG CTACCTCTTAAGCAGGCCGCTTTGCAGGCAGACGCTTCTTCTCTTGCCCTCGACCACGCACACGCGGTCGCCTTC CATACCGGTCTCGGTGCCCCCATATACCCTTCCTCTTTGGCGCCGTATCGCAAGTACCTAAACGAGGAGTACATT GCCAGCTATGCCGACCTCGTCTACTCGAAGCCCAACTTTACCGTCGTGGCGGACGGTGCGTCGCCGACCAATATG TCCAAGTGGATCAGCCAGTTCTTTGCAAACGTGCCCGCCTCTTCTCAGAGCGGCCAGACGCTCAAGGTCGAAGCG TCAAAATACCACGGCGGTGAGCAGCGGACAGACCACGCCGGCGGAAATTCGATGGTCATTGCCTTTCCGGGCTCC GACATGGCCGGCTCAAAACCCGAAATTCCCGTTCTGGCGTCGCTGCTCGGCGGCAAGCCTACGATCAAATGGGCC CCTGGCTTCAGCCTGCTCTGCAAGGCCTGTGCCGGGTTGCCCAACCTCTCCGTTTCGGCGTCGAACATGGCCTAT TCCGACGCGGGTCTGATGGCCGTTCAGCTGTCCGGTAGCGCCTCGTCCGTACGAAAGGCAGCCGAGGCCACTGCC CAGGCACTCAAGTCCATCGCGGGCGGTTCGGTCAAGAAGGAAAACGTGAGCAGGGCCGTTGCCAACGCCAAATTT GAGGCCTTGGACCGCGCTCAACTGCGGGATAACGGCATACTACTGACCGGATCCGGAATTGTGACCAGAGGCAAG CCCTCGGACATGACTGAATTGGTCCGTGGCTTCGACTCCGTTACTTACGAGAAGGTGATTGCGACAGCCAAGTCT CTCCTGGGCGGCAAGGCGACGGTGTCTACCGCTGGAGACCTGTTTGTGCTGCCGTATGCCGATGAGCTGGGATTC AAGGTC |
| Transcript | >Ophio5|2985 ATGATTTCGAGATCCGCGCTCGCAAGACACGCGCAGCAGGCAGCTCGGCTCTCCTTGCCGCGTCGTGGCTTTGCC GCCGCTGCCTCGACGGGAGCTTTCGAAACTTCGGAGATATCCGGTCTGAGAGTCGCTTCGAGGGATGTCCATGGC CCGACGACGAAGCTGGCCGTCATTGTCAAGGCCGGCACCCGATATCAACCTTTGCCCGGCCTGACTGTTGGCCTG GGAGAGTTCGCCTTCAAGACCACGCAGAGACGATCTGCTCTTCGTATACAGCGCGAGTCCGAGCTTCTCGGCGGT CAATTGGCTGTCTCGCACACCCGCGAGGTCCTCCTCCTTGAGGCCAGCTTCCTCCGCGAGGATCTGCCCTTCTTC ACCGAACTGCTGGCCGAGGTCGTGTCCATGACCAAGTATACGACACACGAGCTTCACGAAGACGTCGAGAGGGTG CTACCTCTTAAGCAGGCCGCTTTGCAGGCAGACGCTTCTTCTCTTGCCCTCGACCACGCACACGCGGTCGCCTTC CATACCGGTCTCGGTGCCCCCATATACCCTTCCTCTTTGGCGCCGTATCGCAAGTACCTAAACGAGGAGTACATT GCCAGCTATGCCGACCTCGTCTACTCGAAGCCCAACTTTACCGTCGTGGCGGACGGTGCGTCGCCGACCAATATG TCCAAGTGGATCAGCCAGTTCTTTGCAAACGTGCCCGCCTCTTCTCAGAGCGGCCAGACGCTCAAGGTCGAAGCG TCAAAATACCACGGCGGTGAGCAGCGGACAGACCACGCCGGCGGAAATTCGATGGTCATTGCCTTTCCGGGCTCC GACATGGCCGGCTCAAAACCCGAAATTCCCGTTCTGGCGTCGCTGCTCGGCGGCAAGCCTACGATCAAATGGGCC CCTGGCTTCAGCCTGCTCTGCAAGGCCTGTGCCGGGTTGCCCAACCTCTCCGTTTCGGCGTCGAACATGGCCTAT TCCGACGCGGGTCTGATGGCCGTTCAGCTGTCCGGTAGCGCCTCGTCCGTACGAAAGGCAGCCGAGGCCACTGCC CAGGCACTCAAGTCCATCGCGGGCGGTTCGGTCAAGAAGGAAAACGTGAGCAGGGCCGTTGCCAACGCCAAATTT GAGGCCTTGGACCGCGCTCAACTGCGGGATAACGGCATACTACTGACCGGATCCGGAATTGTGACCAGAGGCAAG CCCTCGGACATGACTGAATTGGTCCGTGGCTTCGACTCCGTTACTTACGAGAAGGTGATTGCGACAGCCAAGTCT CTCCTGGGCGGCAAGGCGACGGTGTCTACCGCTGGAGACCTGTTTGTGCTGCCGTATGCCGATGAGCTGGGATTC AAGGTCTGA |
| Gene | >Ophio5|2985 ATGATTTCGAGATCCGCGCTCGCAAGACACGCGCAGCAGGCAGCTCGGCTCTCCTTGCCGCGTCGTGGCTTTGCC GCCGCTGCCTCGACGGGAGCTTTCGAAACTTCGGAGATATCCGGTCTGAGAGTCGCTTCGAGGGATGTCCATGGC CCGACGACGAAGCTGGCCGTCATTGTCAAGGCCGGCACCCGATATCAACCTTTGCCCGGCCTGACTGTTGGCCTG GGAGAGTTCGCCTTCAAGGTGAAATACATGGACGCCATGGGCAGGCTTCGACATATGCTAACCCTGTACCGCAAC TACAGACCACGCAGAGACGATCTGCTCTTCGTATACAGCGCGAGTCCGAGCTTCTCGGCGGTCAATTGGCTGTCT CGCACACCCGCGAGGTCCTCCTCCTTGAGGCCAGCTTCCTCCGCGAGGATCTGCCCTTCTTCACCGAACTGCTGG CCGAGGTCGTGTCCATGACCAAGTATACGAGTAAGGCCTTATGAGTGAGAGCTCCACGCATTGCCGAGGCTAAAG ATGGCTCCAGCACACGAGCTTCACGAAGACGTCGAGAGGGTGCTACCTCTTAAGCAGGCCGCTTTGCAGGCAGAC GCTTCTTCTCTTGCCCTCGACCACGCACACGCGGTCGCCTTCCATACCGGTCTCGGTGCCCCCATATACCCTTCC TCTTTGGCGCCGTATCGCAAGTACCTAAACGAGGAGTACATTGCCAGCTATGCCGACCTCGTCTACTCGAAGCCC AACTTTACCGTCGTGGCGGACGGTGCGTCGCCGACCAATATGTCCAAGTGGATCAGCCAGTTCTTTGCAAACGTG CCCGCCTCTTCTCAGAGCGGCCAGACGCTCAAGGTCGAAGCGTCAAAATACCACGGCGGTGAGCAGCGGACAGAC CACGCCGGCGGAAATTCGATGGTCATTGCCTTTCCGGGCTCCGACATGGCCGGCTCAAAACCCGAAATTCCCGTT CTGGCGTCGCTGCTCGGCGGCAAGCCTACGATCAAATGGGCCCCTGGCTTCAGCCTGCTCTGCAAGGCCTGTGCC GGGTTGCCCAACCTCTCCGTTTCGGCGTCGAACATGGCCTATTCCGACGCGGGTCTGATGGCCGTTCAGCTGTCC GGTAGCGCCTCGTCCGTACGAAAGGCAGCCGAGGCCACTGCCCAGGCACTCAAGTCCATCGCGGGCGGTTCGGTC AAGAAGGAAAACGTGAGCAGGGCCGTTGCCAACGCCAAATTTGAGGCCTTGGACCGCGCTCAACTGCGGGATAAC GGCATACTACTGACCGGATCCGGAATTGTGACCAGAGGCAAGCCCTCGGACATGACTGAATTGGTCCGTGGCTTC GACTCCGTTACTTACGAGAAGGTGATTGCGGTAAGATGCCTGATGAAGGACCCTGCTAGATGGTACAGACTAACA ACTAGACAGACAGCCAAGTCTCTCCTGGGCGGCAAGGCGACGGTGTCTACCGCTGGAGACCTGTTTGTGCTGCCG TATGCCGATGAGCTGGGATTCAAGGTCTGA |