Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2955
Gene name
Locationscaffold_236:980..2098
Strand-
Gene length (bp)1118
Transcript length (bp)936
Coding sequence length (bp)933
Protein length (aa) 311

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05637 Glyco_transf_34 galactosyl transferase GMA12/MNN10 family 8.2E-68 65 290

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94622|YBKD_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1289.13c PE=3 SV=1 75 299 1.0E-38
sp|O13640|YGWH_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C8D2.17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi048 PE=3 SV=2 83 293 2.0E-38
sp|Q09174|GMA12_SCHPO Alpha-1,2-galactosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gma12 PE=1 SV=1 83 311 6.0E-31
sp|P46985|MNN11_YEAST Probable alpha-1,6-mannosyltransferase MNN11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNN11 PE=1 SV=2 60 295 2.0E-28
sp|Q09681|GMH2_SCHPO Probable alpha-1,2-galactosyltransferase gmh2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh2 PE=3 SV=1 64 287 2.0E-24
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Swissprot ID Swissprot Description Start End E-value
sp|O94622|YBKD_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1289.13c PE=3 SV=1 75 299 1.0E-38
sp|O13640|YGWH_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C8D2.17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi048 PE=3 SV=2 83 293 2.0E-38
sp|Q09174|GMA12_SCHPO Alpha-1,2-galactosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gma12 PE=1 SV=1 83 311 6.0E-31
sp|P46985|MNN11_YEAST Probable alpha-1,6-mannosyltransferase MNN11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNN11 PE=1 SV=2 60 295 2.0E-28
sp|Q09681|GMH2_SCHPO Probable alpha-1,2-galactosyltransferase gmh2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh2 PE=3 SV=1 64 287 2.0E-24
sp|Q10359|GMH3_SCHPO Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh3 PE=3 SV=1 89 287 2.0E-23
sp|Q09679|GMH1_SCHPO Probable alpha-1,2-galactosyltransferase gmh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh1 PE=3 SV=1 65 287 2.0E-22
sp|P50108|MNN10_YEAST Probable alpha-1,6-mannosyltransferase MNN10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNN10 PE=1 SV=1 89 299 1.0E-21
sp|P78817|YFE6_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C637.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC637.06 PE=2 SV=2 3 299 5.0E-16
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0016757 glycosyltransferase activity Yes
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No
GO:0003824 catalytic activity No
GO:0016740 transferase activity No
GO:0005575 cellular_component No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 51 0.5

Transmembrane Domains

Domain # Start End Length
1 31 50 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2955
MHFAYPPRKSSNPPPFRSRSARLPVLRRSRLKLLALGLLALVAVAYLALGRRKPDSYHERVPSGSPSVVLVTVID
PTTWDNAYLRTVKENREQYAERHGYEAMVVKAFDYDTGGAPQSWAKIVAMRHALSKFPDCKFVWYLDQNAYIMNP
AKSLEELVLEPETLERLMIKDFPVVPPDSIIKTFSHLKGQDADFIVSQDKNSLVHTSVIVRNGEWAKYFIETWFD
PLYRSYNFQKAERHALEHVVQWHPTVLSKLALVPQRTIAAYSQSKSGDAYQKGDMVVMFPTCKPQTCEPESKPYL
DQWRSALQQQH
Coding >Ophio5|2955
ATGCATTTCGCGTATCCCCCTCGCAAGAGTTCCAATCCGCCGCCCTTCCGGTCCCGGTCCGCGAGGCTGCCCGTC
CTGCGTCGGAGTCGGTTAAAACTTCTGGCTCTGGGCTTGCTGGCCCTCGTCGCCGTGGCATACCTCGCGCTCGGG
CGCCGAAAACCGGACTCCTACCACGAGCGCGTGCCGTCGGGATCCCCCTCCGTGGTGCTGGTGACCGTCATCGAT
CCGACGACGTGGGACAATGCCTACCTGCGTACCGTCAAGGAGAATCGCGAACAGTATGCGGAGAGACACGGCTAC
GAGGCTATGGTCGTCAAGGCCTTCGACTATGACACGGGCGGCGCGCCACAGTCGTGGGCCAAGATTGTGGCGATG
CGCCACGCGCTGTCCAAGTTTCCCGACTGCAAGTTCGTCTGGTACCTGGATCAGAACGCGTACATTATGAATCCG
GCCAAGAGCCTCGAAGAGCTGGTGCTCGAGCCCGAGACGCTCGAGCGGTTGATGATCAAGGACTTTCCCGTCGTT
CCACCGGACAGCATTATCAAAACCTTTTCGCACCTCAAGGGGCAGGACGCCGATTTCATCGTGAGCCAAGACAAG
AATAGCCTAGTACATACGAGCGTCATTGTTCGTAACGGCGAATGGGCCAAGTACTTTATCGAGACCTGGTTCGAT
CCTCTATATCGGAGCTACAACTTCCAAAAAGCCGAACGGCACGCACTGGAGCATGTTGTTCAGTGGCATCCGACG
GTGCTTTCGAAGCTCGCCCTCGTCCCGCAGCGCACCATAGCCGCGTACTCGCAGTCGAAGTCGGGCGACGCCTAC
CAAAAGGGCGACATGGTCGTCATGTTTCCAACCTGCAAGCCGCAGACGTGCGAGCCGGAGTCGAAGCCCTATCTC
GACCAATGGCGGAGTGCGCTGCAGCAGCAACAC
Transcript >Ophio5|2955
ATGCATTTCGCGTATCCCCCTCGCAAGAGTTCCAATCCGCCGCCCTTCCGGTCCCGGTCCGCGAGGCTGCCCGTC
CTGCGTCGGAGTCGGTTAAAACTTCTGGCTCTGGGCTTGCTGGCCCTCGTCGCCGTGGCATACCTCGCGCTCGGG
CGCCGAAAACCGGACTCCTACCACGAGCGCGTGCCGTCGGGATCCCCCTCCGTGGTGCTGGTGACCGTCATCGAT
CCGACGACGTGGGACAATGCCTACCTGCGTACCGTCAAGGAGAATCGCGAACAGTATGCGGAGAGACACGGCTAC
GAGGCTATGGTCGTCAAGGCCTTCGACTATGACACGGGCGGCGCGCCACAGTCGTGGGCCAAGATTGTGGCGATG
CGCCACGCGCTGTCCAAGTTTCCCGACTGCAAGTTCGTCTGGTACCTGGATCAGAACGCGTACATTATGAATCCG
GCCAAGAGCCTCGAAGAGCTGGTGCTCGAGCCCGAGACGCTCGAGCGGTTGATGATCAAGGACTTTCCCGTCGTT
CCACCGGACAGCATTATCAAAACCTTTTCGCACCTCAAGGGGCAGGACGCCGATTTCATCGTGAGCCAAGACAAG
AATAGCCTAGTACATACGAGCGTCATTGTTCGTAACGGCGAATGGGCCAAGTACTTTATCGAGACCTGGTTCGAT
CCTCTATATCGGAGCTACAACTTCCAAAAAGCCGAACGGCACGCACTGGAGCATGTTGTTCAGTGGCATCCGACG
GTGCTTTCGAAGCTCGCCCTCGTCCCGCAGCGCACCATAGCCGCGTACTCGCAGTCGAAGTCGGGCGACGCCTAC
CAAAAGGGCGACATGGTCGTCATGTTTCCAACCTGCAAGCCGCAGACGTGCGAGCCGGAGTCGAAGCCCTATCTC
GACCAATGGCGGAGTGCGCTGCAGCAGCAACACTAA
Gene >Ophio5|2955
ATGCATTTCGCGTATCCCCCTCGCAAGAGTTCCAATCCGCCGCCCTTCCGGTCCCGGTCCGCGAGGCTGCCCGTC
CTGCGTCGGAGTCGGTTAAAACTTCTGGCTCTGGGCTTGCTGGCCCTCGTCGCCGTGGCATACCTCGCGCTCGGG
CGCCGAAAACCGGACTCCTACCACGAGCGCGTGCCGTCGGGATCCCCCTCCGTGGTGCTGGTGACCGTCATCGAT
CCGACGACGTGGGACAATGCCTACCTGCGTACCGTCAAGGAGAATCGCGAACAGTATGCGGAGAGACACGGTCAG
GAACCCTTTCCCCATCTCTCTCTCTCTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTCTCTCTCTCTCTCTCTCCATCAGCTTACCTTTCCTCCAGGCTACGAGGCTATGGTCGTCAAGGCCTT
CGACTATGACACGGGCGGCGCGCCACAGTCGTGGGCCAAGATTGTGGCGATGCGCCACGCGCTGTCCAAGTTTCC
CGACTGCAAGTTCGTCTGGTACCTGGATCAGAACGCGTACATTATGAATCCGGCCAAGAGCCTCGAAGAGCTGGT
GCTCGAGCCCGAGACGCTCGAGCGGTTGATGATCAAGGACTTTCCCGTCGTTCCACCGGACAGCATTATCAAAAC
CTTTTCGCACCTCAAGGGGCAGGACGCCGATTTCATCGTGAGCCAAGACAAGAATAGCCTAGTACATACGAGCGT
CATTGTTCGTAACGGCGAATGGGCCAAGTACTTTATCGAGACCTGGTTCGATCCTCTATATCGGAGCTACAACTT
CCAAAAAGCCGAACGGCACGCACTGGCAAGTTGGCCAATCTCCCCGGAATTGCTTGCTTGGACTGACGGGGACGA
CGCAGGAGCATGTTGTTCAGTGGCATCCGACGGTGCTTTCGAAGCTCGCCCTCGTCCCGCAGCGCACCATAGCCG
CGTACTCGCAGTCGAAGTCGGGCGACGCCTACCAAAAGGGCGACATGGTCGTCATGTTTCCAACCTGCAAGCCGC
AGACGTGCGAGCCGGAGTCGAAGCCCTATCTCGACCAATGGCGGAGTGCGCTGCAGCAGCAACACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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