Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2946
Gene name
Locationscaffold_235:2646..3613
Strand-
Gene length (bp)967
Transcript length (bp)801
Coding sequence length (bp)798
Protein length (aa) 266

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 63 0.5

Transmembrane Domains

Domain # Start End Length
1 28 50 22
2 78 100 22
3 110 132 22
4 144 166 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2946
MAGHFEPDQELCRRYALFAADLQRGHFLILYWFMFIGNLSILFFASWIYIKAQEALETHPGRSRLRARALQKAVM
ADVICVAVSTVVVIMEAFTLLALQFCDGEDLMSLYWSTWTMIQVGALIAMVGIVLALVHSLRDSKHPPWALAMGT
PVLVIAGFLHLFHQVTKKNIKKIRRKGSTSASEGSEMSKEDSTDIEADAEPEWDSEKGIQAEVIGSTADGGMIVR
FLAPQPSWASRGGLLLGHTEDERPIVAFSKGTITFEPESRS
Coding >Ophio5|2946
ATGGCTGGCCACTTCGAACCAGACCAAGAACTTTGCCGGCGGTACGCGCTGTTTGCGGCCGACCTACAACGAGGG
CATTTCTTGATCCTCTACTGGTTCATGTTTATTGGAAACCTATCAATCCTTTTTTTCGCCTCATGGATATACATC
AAGGCACAGGAGGCTCTCGAAACACATCCCGGTCGGTCGCGGCTGCGGGCACGGGCATTGCAAAAGGCCGTTATG
GCCGACGTCATCTGTGTCGCCGTGTCGACCGTCGTCGTCATCATGGAGGCCTTTACACTGTTGGCGCTGCAGTTT
TGCGATGGCGAGGACCTCATGTCGCTCTATTGGTCCACTTGGACCATGATCCAAGTCGGAGCCTTGATTGCCATG
GTGGGCATCGTCCTCGCCCTAGTCCACTCACTGCGGGATAGCAAGCATCCCCCGTGGGCGCTCGCCATGGGAACT
CCCGTTCTCGTCATTGCAGGGTTCCTACACTTGTTCCACCAGGTCACCAAGAAGAATATCAAGAAGATACGGCGC
AAAGGCTCGACTTCGGCGTCGGAGGGATCAGAGATGAGCAAGGAGGATTCCACGGACATAGAGGCCGATGCCGAG
CCCGAATGGGACTCGGAAAAGGGAATCCAGGCCGAGGTGATTGGCTCGACAGCCGACGGCGGCATGATCGTGCGC
TTCCTCGCCCCCCAACCAAGTTGGGCTTCCAGGGGAGGGCTACTTCTAGGGCACACAGAGGACGAGCGGCCGATT
GTGGCTTTTTCCAAGGGCACCATTACGTTTGAGCCGGAATCGCGAAGC
Transcript >Ophio5|2946
ATGGCTGGCCACTTCGAACCAGACCAAGAACTTTGCCGGCGGTACGCGCTGTTTGCGGCCGACCTACAACGAGGG
CATTTCTTGATCCTCTACTGGTTCATGTTTATTGGAAACCTATCAATCCTTTTTTTCGCCTCATGGATATACATC
AAGGCACAGGAGGCTCTCGAAACACATCCCGGTCGGTCGCGGCTGCGGGCACGGGCATTGCAAAAGGCCGTTATG
GCCGACGTCATCTGTGTCGCCGTGTCGACCGTCGTCGTCATCATGGAGGCCTTTACACTGTTGGCGCTGCAGTTT
TGCGATGGCGAGGACCTCATGTCGCTCTATTGGTCCACTTGGACCATGATCCAAGTCGGAGCCTTGATTGCCATG
GTGGGCATCGTCCTCGCCCTAGTCCACTCACTGCGGGATAGCAAGCATCCCCCGTGGGCGCTCGCCATGGGAACT
CCCGTTCTCGTCATTGCAGGGTTCCTACACTTGTTCCACCAGGTCACCAAGAAGAATATCAAGAAGATACGGCGC
AAAGGCTCGACTTCGGCGTCGGAGGGATCAGAGATGAGCAAGGAGGATTCCACGGACATAGAGGCCGATGCCGAG
CCCGAATGGGACTCGGAAAAGGGAATCCAGGCCGAGGTGATTGGCTCGACAGCCGACGGCGGCATGATCGTGCGC
TTCCTCGCCCCCCAACCAAGTTGGGCTTCCAGGGGAGGGCTACTTCTAGGGCACACAGAGGACGAGCGGCCGATT
GTGGCTTTTTCCAAGGGCACCATTACGTTTGAGCCGGAATCGCGAAGCTAG
Gene >Ophio5|2946
ATGGCTGGCCACTTCGAACCAGACCAAGAACTTTGCCGGCGGTACGCGCTGTTTGCGGCCGACCTACAACGAGGG
CATTTCTTGATCCTCTACTGGTTCATGTTTATTGGAAACCTATCAATCCTTTTTTTCGCCTCATGGATATACATC
AAGTAGGTCCATCGAGGCTGATTTTCTTGTCACTTGCGGGACTAACATCGATTCCGAGTTATTAGGGCACAGGAG
GCTCTCGAAACACATCCCGGTCGGTCGCGGCTGCGGGCACGGGCATTGCAAAAGGCCGTTATGGCCGACGTCATC
TGTGTCGCCGTGTCGACCGTCGTCGTCATCATGGAGGCCTTTACACTGTTGGCGCTGCAGTTTTGCGATGGCGAG
GACCTCATGTCGCTCTATTGGTCCACTTGGACCATGATCCAAGTCGGAGCCTTGATTGCCATGGTGGGCATCGTC
CTCGCCCTAGTCCACTCACTGCGGGATAGCAAGCATCCGTAAGTCGCATCGTCCCTCCCCGATAAAGCCGTCGCT
GACGATAGTCGCAGCCCGTGGGCGCTCGCCATGGGAACTCCCGTTCTCGTCATTGCAGGGTTCCTACACTTGTTC
CACCAGGTCACCAAGAAGAATATCAAGAAGATACGGCGCAAAGGCTCGACTTCGGCGTCGGAGGGATCAGAGATG
AGCAAGGAGTCAGTGGTTGTGGTCGTTGCTGGTCCAAGACAAAGCTAACTGGCTTCTCAGGGATTCCACGGACAT
AGAGGCCGATGCCGAGCCCGAATGGGACTCGGAAAAGGGAATCCAGGCCGAGGTGATTGGCTCGACAGCCGACGG
CGGCATGATCGTGCGCTTCCTCGCCCCCCAACCAAGTTGGGCTTCCAGGGGAGGGCTACTTCTAGGGCACACAGA
GGACGAGCGGCCGATTGTGGCTTTTTCCAAGGGCACCATTACGTTTGAGCCGGAATCGCGAAGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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