Protein ID | Ophio5|2939 |
Gene name | |
Location | scaffold_234:15247..17767 |
Strand | + |
Gene length (bp) | 2520 |
Transcript length (bp) | 2520 |
Coding sequence length (bp) | 2517 |
Protein length (aa) | 839 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11885 | DUF3405 | Protein of unknown function (DUF3405) | 1.1E-227 | 247 | 817 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 95 | 117 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|2939 MGAVSNPLRSREHRLPLYQKIDPSTKDRYSDDGFESPISDTESDHTLATVSPCRSRDISHSVSKGHFLLSRRRPV LSTRKAGLYPYRLPARVSRYVFLGVLGILVLMILSLIRASQVENWKVVNGKVSLAPAPAPVWEQFPFLERYYGGL RHLKPFHESEPEYPRPAESRTPPSSRGRITARADIPLSKSWQHFPGRSTESGIQECFLDAAGNIRPPPLRYYEGR PLGFPENVAGSYEVLKLPQDICFERFGRLGPYGLGYSARAGGLGTSEYGDKEGSEAVWDKTRPVDFRHVDWAHVQ RQCFNANAGRFRELPVSTPAPHGFYVANSRSSSIRHRNVVSNGSSGHANAPRSDEADGKIEKQARTAVVVRCWDE YLFREDDIANMRAMITELSLASGGRYDVHLLVQVKNDAHNPIWADHEAYEKRIRDSVPEEFRGLVTLWTETQMLS LYQGIYDLWSRGPGLPVHGVYRGLSMAMQYFAYQHPEYDFFWQWEMDIRYTGHYHDLLSKIEDWAKEQPRKGLWE RNSRFYFPSVHGSWDDFSQMTRVQTEMSASGLDNDKVLGKVGSAAKKASELVSNKGKPVWGPLRPSDANDWFETE EDGMPETEYEADRYQWGVGEEADYISLNPLFDPEGTTWLLKDDITGFNGSHPLPPRRASIITTARMSRRLLMAMH RTTAYKKQFAFPEMWPATVALHHGFKSVFAPHPMYVDRKWPVKYMAQVYNGGRDGTSGGSRTSIFGEREHNMHGI TWFYNSGFAPNLYRRWLGLKVNNDGGPDFETTTDASKQGKGGGGVGAMPGGEGRMCLPPMLLHPVKDVEQPVEDV AVTEGELPITDPAA |
Coding | >Ophio5|2939 ATGGGGGCTGTCTCAAACCCTCTGCGCTCTCGCGAGCATCGGCTGCCGCTGTACCAGAAGATCGACCCGTCTACC AAGGATAGATATTCAGACGACGGCTTCGAGTCGCCCATATCCGACACCGAGTCCGATCATACGCTCGCTACTGTG TCGCCTTGCCGATCTCGCGATATCTCCCACTCGGTCTCCAAGGGCCACTTTCTGCTGTCGAGGCGCCGGCCCGTC CTCTCTACCCGCAAGGCCGGCCTTTATCCCTATCGCCTGCCCGCCAGGGTTTCGCGCTATGTCTTCCTTGGCGTG CTGGGCATCCTCGTCCTCATGATACTCAGCCTGATACGCGCCAGTCAGGTCGAAAACTGGAAAGTGGTCAATGGC AAGGTCAGCTTGGCGCCCGCGCCCGCGCCCGTCTGGGAGCAGTTCCCCTTCCTCGAGAGATACTACGGCGGTCTG CGGCACTTGAAGCCCTTTCATGAGAGCGAGCCCGAATATCCGCGCCCGGCTGAGTCTCGAACTCCGCCGTCGTCT CGGGGGCGCATTACGGCGCGAGCGGACATTCCCCTGAGCAAGTCTTGGCAGCACTTCCCTGGGAGGAGCACCGAG TCGGGCATCCAAGAGTGTTTCCTTGATGCCGCTGGCAACATACGGCCCCCCCCTCTACGCTACTACGAGGGGCGC CCCCTCGGCTTTCCGGAAAATGTGGCCGGCTCCTACGAGGTGCTGAAATTGCCGCAAGACATCTGCTTTGAGCGC TTCGGCCGGCTCGGCCCGTACGGCTTGGGGTACTCCGCCCGCGCTGGTGGCCTGGGCACGAGCGAGTACGGCGAC AAGGAAGGGTCTGAGGCGGTATGGGACAAGACACGGCCTGTCGACTTTCGCCACGTCGATTGGGCCCACGTCCAG CGCCAATGCTTCAATGCGAATGCCGGACGCTTCCGTGAGCTGCCGGTGTCGACGCCGGCGCCGCATGGCTTCTAC GTGGCGAATTCTCGGTCCTCGAGCATCCGACACCGAAATGTCGTTTCCAACGGTTCCAGCGGCCACGCCAATGCC CCGAGAAGCGACGAGGCGGACGGCAAAATCGAGAAACAAGCCAGGACGGCCGTCGTCGTCCGATGCTGGGACGAG TACTTGTTCCGCGAGGACGACATCGCCAATATGCGAGCCATGATCACTGAACTATCCCTGGCATCGGGTGGACGG TACGACGTGCATCTGCTCGTGCAAGTCAAGAACGACGCCCACAACCCCATCTGGGCAGATCATGAAGCCTATGAG AAGCGGATCCGCGATAGCGTGCCTGAGGAGTTTCGAGGATTGGTCACGCTCTGGACCGAGACGCAGATGTTGTCG CTTTACCAGGGCATCTACGACTTGTGGAGTCGGGGCCCCGGGCTGCCCGTTCACGGCGTCTATCGAGGATTGTCG ATGGCGATGCAGTATTTCGCCTATCAGCACCCGGAGTATGACTTCTTCTGGCAGTGGGAGATGGATATACGCTAC ACTGGCCACTATCACGACCTACTGAGCAAGATCGAGGACTGGGCCAAGGAACAGCCGAGGAAGGGCCTCTGGGAG CGCAATTCGCGCTTTTACTTTCCCTCCGTTCACGGCTCATGGGACGACTTTTCGCAGATGACACGCGTGCAGACG GAGATGAGCGCGAGCGGGTTGGACAACGACAAGGTCCTCGGCAAGGTGGGCAGTGCAGCCAAGAAAGCATCCGAG CTAGTGAGCAACAAAGGCAAGCCGGTATGGGGTCCCCTTCGACCCTCGGATGCCAATGACTGGTTCGAGACGGAG GAGGACGGCATGCCCGAGACGGAATACGAAGCCGATCGCTACCAGTGGGGCGTGGGCGAAGAAGCCGACTACATC TCGCTGAACCCCCTCTTCGATCCGGAGGGCACAACCTGGCTGCTCAAGGACGACATCACGGGCTTCAACGGGTCG CATCCGCTGCCCCCTCGCCGAGCATCCATCATCACGACGGCTCGCATGTCGCGCCGGCTGCTCATGGCCATGCAC CGGACGACGGCGTACAAGAAGCAGTTTGCCTTTCCCGAGATGTGGCCGGCGACGGTAGCCCTCCACCACGGCTTC AAGTCGGTCTTTGCGCCTCACCCCATGTACGTCGACAGGAAGTGGCCGGTCAAGTACATGGCGCAGGTCTACAAC GGCGGCCGAGACGGCACAAGCGGAGGCTCGCGGACGAGCATCTTCGGCGAGCGCGAGCACAACATGCACGGCATC ACCTGGTTCTACAACTCGGGCTTCGCGCCCAACCTGTACCGTCGCTGGCTCGGCCTCAAGGTCAACAACGACGGC GGCCCCGACTTTGAGACGACGACGGATGCCTCCAAGCAGGGCAAAGGAGGCGGCGGCGTTGGTGCCATGCCCGGC GGTGAGGGCCGTATGTGTCTGCCGCCCATGCTGCTGCATCCCGTCAAGGATGTGGAGCAGCCGGTCGAGGACGTT GCGGTCACAGAGGGCGAGCTGCCCATCACGGATCCAGCAGCG |
Transcript | >Ophio5|2939 ATGGGGGCTGTCTCAAACCCTCTGCGCTCTCGCGAGCATCGGCTGCCGCTGTACCAGAAGATCGACCCGTCTACC AAGGATAGATATTCAGACGACGGCTTCGAGTCGCCCATATCCGACACCGAGTCCGATCATACGCTCGCTACTGTG TCGCCTTGCCGATCTCGCGATATCTCCCACTCGGTCTCCAAGGGCCACTTTCTGCTGTCGAGGCGCCGGCCCGTC CTCTCTACCCGCAAGGCCGGCCTTTATCCCTATCGCCTGCCCGCCAGGGTTTCGCGCTATGTCTTCCTTGGCGTG CTGGGCATCCTCGTCCTCATGATACTCAGCCTGATACGCGCCAGTCAGGTCGAAAACTGGAAAGTGGTCAATGGC AAGGTCAGCTTGGCGCCCGCGCCCGCGCCCGTCTGGGAGCAGTTCCCCTTCCTCGAGAGATACTACGGCGGTCTG CGGCACTTGAAGCCCTTTCATGAGAGCGAGCCCGAATATCCGCGCCCGGCTGAGTCTCGAACTCCGCCGTCGTCT CGGGGGCGCATTACGGCGCGAGCGGACATTCCCCTGAGCAAGTCTTGGCAGCACTTCCCTGGGAGGAGCACCGAG TCGGGCATCCAAGAGTGTTTCCTTGATGCCGCTGGCAACATACGGCCCCCCCCTCTACGCTACTACGAGGGGCGC CCCCTCGGCTTTCCGGAAAATGTGGCCGGCTCCTACGAGGTGCTGAAATTGCCGCAAGACATCTGCTTTGAGCGC TTCGGCCGGCTCGGCCCGTACGGCTTGGGGTACTCCGCCCGCGCTGGTGGCCTGGGCACGAGCGAGTACGGCGAC AAGGAAGGGTCTGAGGCGGTATGGGACAAGACACGGCCTGTCGACTTTCGCCACGTCGATTGGGCCCACGTCCAG CGCCAATGCTTCAATGCGAATGCCGGACGCTTCCGTGAGCTGCCGGTGTCGACGCCGGCGCCGCATGGCTTCTAC GTGGCGAATTCTCGGTCCTCGAGCATCCGACACCGAAATGTCGTTTCCAACGGTTCCAGCGGCCACGCCAATGCC CCGAGAAGCGACGAGGCGGACGGCAAAATCGAGAAACAAGCCAGGACGGCCGTCGTCGTCCGATGCTGGGACGAG TACTTGTTCCGCGAGGACGACATCGCCAATATGCGAGCCATGATCACTGAACTATCCCTGGCATCGGGTGGACGG TACGACGTGCATCTGCTCGTGCAAGTCAAGAACGACGCCCACAACCCCATCTGGGCAGATCATGAAGCCTATGAG AAGCGGATCCGCGATAGCGTGCCTGAGGAGTTTCGAGGATTGGTCACGCTCTGGACCGAGACGCAGATGTTGTCG CTTTACCAGGGCATCTACGACTTGTGGAGTCGGGGCCCCGGGCTGCCCGTTCACGGCGTCTATCGAGGATTGTCG ATGGCGATGCAGTATTTCGCCTATCAGCACCCGGAGTATGACTTCTTCTGGCAGTGGGAGATGGATATACGCTAC ACTGGCCACTATCACGACCTACTGAGCAAGATCGAGGACTGGGCCAAGGAACAGCCGAGGAAGGGCCTCTGGGAG CGCAATTCGCGCTTTTACTTTCCCTCCGTTCACGGCTCATGGGACGACTTTTCGCAGATGACACGCGTGCAGACG GAGATGAGCGCGAGCGGGTTGGACAACGACAAGGTCCTCGGCAAGGTGGGCAGTGCAGCCAAGAAAGCATCCGAG CTAGTGAGCAACAAAGGCAAGCCGGTATGGGGTCCCCTTCGACCCTCGGATGCCAATGACTGGTTCGAGACGGAG GAGGACGGCATGCCCGAGACGGAATACGAAGCCGATCGCTACCAGTGGGGCGTGGGCGAAGAAGCCGACTACATC TCGCTGAACCCCCTCTTCGATCCGGAGGGCACAACCTGGCTGCTCAAGGACGACATCACGGGCTTCAACGGGTCG CATCCGCTGCCCCCTCGCCGAGCATCCATCATCACGACGGCTCGCATGTCGCGCCGGCTGCTCATGGCCATGCAC CGGACGACGGCGTACAAGAAGCAGTTTGCCTTTCCCGAGATGTGGCCGGCGACGGTAGCCCTCCACCACGGCTTC AAGTCGGTCTTTGCGCCTCACCCCATGTACGTCGACAGGAAGTGGCCGGTCAAGTACATGGCGCAGGTCTACAAC GGCGGCCGAGACGGCACAAGCGGAGGCTCGCGGACGAGCATCTTCGGCGAGCGCGAGCACAACATGCACGGCATC ACCTGGTTCTACAACTCGGGCTTCGCGCCCAACCTGTACCGTCGCTGGCTCGGCCTCAAGGTCAACAACGACGGC GGCCCCGACTTTGAGACGACGACGGATGCCTCCAAGCAGGGCAAAGGAGGCGGCGGCGTTGGTGCCATGCCCGGC GGTGAGGGCCGTATGTGTCTGCCGCCCATGCTGCTGCATCCCGTCAAGGATGTGGAGCAGCCGGTCGAGGACGTT GCGGTCACAGAGGGCGAGCTGCCCATCACGGATCCAGCAGCGTGA |
Gene | >Ophio5|2939 ATGGGGGCTGTCTCAAACCCTCTGCGCTCTCGCGAGCATCGGCTGCCGCTGTACCAGAAGATCGACCCGTCTACC AAGGATAGATATTCAGACGACGGCTTCGAGTCGCCCATATCCGACACCGAGTCCGATCATACGCTCGCTACTGTG TCGCCTTGCCGATCTCGCGATATCTCCCACTCGGTCTCCAAGGGCCACTTTCTGCTGTCGAGGCGCCGGCCCGTC CTCTCTACCCGCAAGGCCGGCCTTTATCCCTATCGCCTGCCCGCCAGGGTTTCGCGCTATGTCTTCCTTGGCGTG CTGGGCATCCTCGTCCTCATGATACTCAGCCTGATACGCGCCAGTCAGGTCGAAAACTGGAAAGTGGTCAATGGC AAGGTCAGCTTGGCGCCCGCGCCCGCGCCCGTCTGGGAGCAGTTCCCCTTCCTCGAGAGATACTACGGCGGTCTG CGGCACTTGAAGCCCTTTCATGAGAGCGAGCCCGAATATCCGCGCCCGGCTGAGTCTCGAACTCCGCCGTCGTCT CGGGGGCGCATTACGGCGCGAGCGGACATTCCCCTGAGCAAGTCTTGGCAGCACTTCCCTGGGAGGAGCACCGAG TCGGGCATCCAAGAGTGTTTCCTTGATGCCGCTGGCAACATACGGCCCCCCCCTCTACGCTACTACGAGGGGCGC CCCCTCGGCTTTCCGGAAAATGTGGCCGGCTCCTACGAGGTGCTGAAATTGCCGCAAGACATCTGCTTTGAGCGC TTCGGCCGGCTCGGCCCGTACGGCTTGGGGTACTCCGCCCGCGCTGGTGGCCTGGGCACGAGCGAGTACGGCGAC AAGGAAGGGTCTGAGGCGGTATGGGACAAGACACGGCCTGTCGACTTTCGCCACGTCGATTGGGCCCACGTCCAG CGCCAATGCTTCAATGCGAATGCCGGACGCTTCCGTGAGCTGCCGGTGTCGACGCCGGCGCCGCATGGCTTCTAC GTGGCGAATTCTCGGTCCTCGAGCATCCGACACCGAAATGTCGTTTCCAACGGTTCCAGCGGCCACGCCAATGCC CCGAGAAGCGACGAGGCGGACGGCAAAATCGAGAAACAAGCCAGGACGGCCGTCGTCGTCCGATGCTGGGACGAG TACTTGTTCCGCGAGGACGACATCGCCAATATGCGAGCCATGATCACTGAACTATCCCTGGCATCGGGTGGACGG TACGACGTGCATCTGCTCGTGCAAGTCAAGAACGACGCCCACAACCCCATCTGGGCAGATCATGAAGCCTATGAG AAGCGGATCCGCGATAGCGTGCCTGAGGAGTTTCGAGGATTGGTCACGCTCTGGACCGAGACGCAGATGTTGTCG CTTTACCAGGGCATCTACGACTTGTGGAGTCGGGGCCCCGGGCTGCCCGTTCACGGCGTCTATCGAGGATTGTCG ATGGCGATGCAGTATTTCGCCTATCAGCACCCGGAGTATGACTTCTTCTGGCAGTGGGAGATGGATATACGCTAC ACTGGCCACTATCACGACCTACTGAGCAAGATCGAGGACTGGGCCAAGGAACAGCCGAGGAAGGGCCTCTGGGAG CGCAATTCGCGCTTTTACTTTCCCTCCGTTCACGGCTCATGGGACGACTTTTCGCAGATGACACGCGTGCAGACG GAGATGAGCGCGAGCGGGTTGGACAACGACAAGGTCCTCGGCAAGGTGGGCAGTGCAGCCAAGAAAGCATCCGAG CTAGTGAGCAACAAAGGCAAGCCGGTATGGGGTCCCCTTCGACCCTCGGATGCCAATGACTGGTTCGAGACGGAG GAGGACGGCATGCCCGAGACGGAATACGAAGCCGATCGCTACCAGTGGGGCGTGGGCGAAGAAGCCGACTACATC TCGCTGAACCCCCTCTTCGATCCGGAGGGCACAACCTGGCTGCTCAAGGACGACATCACGGGCTTCAACGGGTCG CATCCGCTGCCCCCTCGCCGAGCATCCATCATCACGACGGCTCGCATGTCGCGCCGGCTGCTCATGGCCATGCAC CGGACGACGGCGTACAAGAAGCAGTTTGCCTTTCCCGAGATGTGGCCGGCGACGGTAGCCCTCCACCACGGCTTC AAGTCGGTCTTTGCGCCTCACCCCATGTACGTCGACAGGAAGTGGCCGGTCAAGTACATGGCGCAGGTCTACAAC GGCGGCCGAGACGGCACAAGCGGAGGCTCGCGGACGAGCATCTTCGGCGAGCGCGAGCACAACATGCACGGCATC ACCTGGTTCTACAACTCGGGCTTCGCGCCCAACCTGTACCGTCGCTGGCTCGGCCTCAAGGTCAACAACGACGGC GGCCCCGACTTTGAGACGACGACGGATGCCTCCAAGCAGGGCAAAGGAGGCGGCGGCGTTGGTGCCATGCCCGGC GGTGAGGGCCGTATGTGTCTGCCGCCCATGCTGCTGCATCCCGTCAAGGATGTGGAGCAGCCGGTCGAGGACGTT GCGGTCACAGAGGGCGAGCTGCCCATCACGGATCCAGCAGCGTGA |