Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|292
Gene name
Locationscaffold_106:39654..41001
Strand-
Gene length (bp)1347
Transcript length (bp)1200
Coding sequence length (bp)1197
Protein length (aa) 399

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00397 WW WW domain 7.8E-11 19 49

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|292
MAGPTSPGGQGPTFAPPPLPSGWIAQWDGASKKYYYVQLATGVSQWEVPTQAAQTGNTPGQHLDHPYGTPPQPEL
ITHPDGSQTVKHADGTLEPIMADASRGGDAPNGGDRGLGSMAMNAILGGKSSNHGGGGGGGGIGSLANQFLGGGG
HGGGGGGGGKSSAGKLVGQLASSLLSPSNKPDPPQNYHGGQTSGQSSHSQGGLTGAVFGGVANMFGGKPSHGSGG
QNYGYSNTGTGSAYSGDAPTYNPPGSSHSSSGHAPPPPSQSSHHSFQPPPPAASQQGHSSYGQSFGNQPGGSGGY
SHSPPSYGGPSPAAQHAPYGQSHQAHSGGYGQSQSGGGYGPNHSAGAGGGYGQGSSSGYGSAGYGQAHSAGYGNH
YSGGQAGHHQYGGHSSGPYPGAPY
Coding >Ophio5|292
ATGGCTGGGCCGACATCCCCGGGTGGCCAAGGTCCCACGTTCGCGCCCCCTCCTCTGCCCTCTGGCTGGATTGCG
CAGTGGGACGGCGCAAGCAAGAAGTACTATTACGTCCAACTCGCCACCGGCGTCTCCCAGTGGGAGGTGCCGACG
CAGGCGGCGCAGACGGGCAATACCCCGGGACAGCACCTCGATCATCCCTACGGCACCCCGCCCCAACCTGAGCTC
ATCACCCATCCTGACGGCTCGCAGACAGTTAAGCACGCAGACGGAACCCTCGAACCCATCATGGCTGACGCCTCG
AGAGGAGGCGACGCTCCCAACGGCGGCGATCGCGGACTCGGTTCCATGGCTATGAACGCCATCCTCGGCGGCAAA
TCCTCTAATCACGGCGGCGGAGGCGGCGGAGGCGGCATCGGCTCCCTCGCCAACCAGTTTCTAGGCGGCGGCGGA
CACGGAGGAGGTGGCGGCGGTGGCGGCAAGAGCTCCGCCGGTAAACTGGTCGGACAGCTGGCCTCCAGCCTCCTC
TCGCCATCCAACAAGCCCGACCCGCCTCAGAACTATCATGGCGGTCAGACGTCGGGTCAGTCTTCTCATAGCCAG
GGTGGCCTGACTGGCGCCGTCTTTGGCGGTGTCGCCAACATGTTTGGTGGCAAACCGTCACACGGCAGCGGTGGC
CAAAATTACGGCTACTCCAACACCGGCACAGGCAGTGCCTACTCCGGAGATGCGCCCACCTACAACCCGCCGGGG
TCCAGTCACTCATCGTCGGGCCACGCGCCGCCGCCACCCTCTCAATCGAGCCATCACTCCTTTCAACCGCCTCCG
CCGGCCGCCTCTCAGCAAGGCCACTCCTCGTACGGCCAATCCTTTGGGAACCAACCTGGTGGCAGTGGTGGATAT
TCACACTCTCCGCCAAGCTACGGCGGCCCGTCCCCCGCCGCTCAACACGCCCCGTACGGCCAGTCCCATCAGGCG
CATTCGGGCGGTTACGGTCAGAGCCAGTCCGGGGGTGGCTACGGCCCGAACCATTCCGCCGGCGCCGGCGGCGGT
TACGGTCAGGGGTCCTCCTCCGGTTACGGTTCGGCTGGTTACGGCCAAGCGCATTCGGCCGGTTATGGCAACCAT
TACTCCGGAGGCCAGGCCGGCCATCACCAATACGGCGGACACAGCTCAGGGCCTTACCCCGGTGCCCCTTAC
Transcript >Ophio5|292
ATGGCTGGGCCGACATCCCCGGGTGGCCAAGGTCCCACGTTCGCGCCCCCTCCTCTGCCCTCTGGCTGGATTGCG
CAGTGGGACGGCGCAAGCAAGAAGTACTATTACGTCCAACTCGCCACCGGCGTCTCCCAGTGGGAGGTGCCGACG
CAGGCGGCGCAGACGGGCAATACCCCGGGACAGCACCTCGATCATCCCTACGGCACCCCGCCCCAACCTGAGCTC
ATCACCCATCCTGACGGCTCGCAGACAGTTAAGCACGCAGACGGAACCCTCGAACCCATCATGGCTGACGCCTCG
AGAGGAGGCGACGCTCCCAACGGCGGCGATCGCGGACTCGGTTCCATGGCTATGAACGCCATCCTCGGCGGCAAA
TCCTCTAATCACGGCGGCGGAGGCGGCGGAGGCGGCATCGGCTCCCTCGCCAACCAGTTTCTAGGCGGCGGCGGA
CACGGAGGAGGTGGCGGCGGTGGCGGCAAGAGCTCCGCCGGTAAACTGGTCGGACAGCTGGCCTCCAGCCTCCTC
TCGCCATCCAACAAGCCCGACCCGCCTCAGAACTATCATGGCGGTCAGACGTCGGGTCAGTCTTCTCATAGCCAG
GGTGGCCTGACTGGCGCCGTCTTTGGCGGTGTCGCCAACATGTTTGGTGGCAAACCGTCACACGGCAGCGGTGGC
CAAAATTACGGCTACTCCAACACCGGCACAGGCAGTGCCTACTCCGGAGATGCGCCCACCTACAACCCGCCGGGG
TCCAGTCACTCATCGTCGGGCCACGCGCCGCCGCCACCCTCTCAATCGAGCCATCACTCCTTTCAACCGCCTCCG
CCGGCCGCCTCTCAGCAAGGCCACTCCTCGTACGGCCAATCCTTTGGGAACCAACCTGGTGGCAGTGGTGGATAT
TCACACTCTCCGCCAAGCTACGGCGGCCCGTCCCCCGCCGCTCAACACGCCCCGTACGGCCAGTCCCATCAGGCG
CATTCGGGCGGTTACGGTCAGAGCCAGTCCGGGGGTGGCTACGGCCCGAACCATTCCGCCGGCGCCGGCGGCGGT
TACGGTCAGGGGTCCTCCTCCGGTTACGGTTCGGCTGGTTACGGCCAAGCGCATTCGGCCGGTTATGGCAACCAT
TACTCCGGAGGCCAGGCCGGCCATCACCAATACGGCGGACACAGCTCAGGGCCTTACCCCGGTGCCCCTTACTGA
Gene >Ophio5|292
ATGGCTGGGCCGACATCCCCGGGTGGCCAAGGTCCCACGTTCGCGCCCCCTCCTCTGCCCTCTGGCTGGATTGCG
CAGTGGGACGGCGCAAGCAAGAAGTACTATTACGTCCAACTCGCCACCGGCGTCTCCCAGTGGGAGGTGCCGACG
CAGGCGGCGCAGACGGGCAATACCCCGGGACAGCACCTCGATCATCCCTACGGCACCCCGCCCCAACCTGAGCTC
ATCACCCATCCTGACGGCTCGCAGACAGTTAAGCACGCAGACGGAACCCTCGAACCCATCATGGCTGACGCCTCG
AGAGGAGGCGACGCTCCCAACGGCGGCGATCGCGGACTCGGTGTAAGTCGCGTTTATCCCCATCTTTTTCTTTCT
AATTCATCGCCTTGTTTTGGGGCGTGCTGACCAAAAACCCGGCCCAGTCCATGGCTATGAACGCCATCCTCGGCG
GCAAATCCTCTAATCACGGCGGCGGAGGCGGCGGAGGCGGCATCGGCTCCCTCGCCAACCAGTTTCTAGGCGGCG
GCGGACACGGAGGAGGTGGCGGCGGTGGCGGCAAGAGCTCCGCCGGTAAACTGGTCGGACAGCTGGCCTCCAGCC
TCCTCTCGCCATCCAACAAGCCCGACCCGCCTCAGAACTATCATGGCGGTCAGACGTCGGGTCAGTCTTCTCATA
GCCAGGGTGGCCTGACTGGCGCCGTCTTTGGCGGTGTCGCCAACATGTTTGGTGGCAAACCGTCACACGGCAGCG
GTGTAAGCCTCCATCCCTCCCCTCCTCTTTCGGCGCAGAATTGCCGACTGATCTCCGAGTCGTGGCTAGGGCCAA
AATTACGGCTACTCCAACACCGGCACAGGCAGTGCCTACTCCGGAGATGCGCCCACCTACAACCCGCCGGGGTCC
AGTCACTCATCGTCGGGCCACGCGCCGCCGCCACCCTCTCAATCGAGCCATCACTCCTTTCAACCGCCTCCGCCG
GCCGCCTCTCAGCAAGGCCACTCCTCGTACGGCCAATCCTTTGGGAACCAACCTGGTGGCAGTGGTGGATATTCA
CACTCTCCGCCAAGCTACGGCGGCCCGTCCCCCGCCGCTCAACACGCCCCGTACGGCCAGTCCCATCAGGCGCAT
TCGGGCGGTTACGGTCAGAGCCAGTCCGGGGGTGGCTACGGCCCGAACCATTCCGCCGGCGCCGGCGGCGGTTAC
GGTCAGGGGTCCTCCTCCGGTTACGGTTCGGCTGGTTACGGCCAAGCGCATTCGGCCGGTTATGGCAACCATTAC
TCCGGAGGCCAGGCCGGCCATCACCAATACGGCGGACACAGCTCAGGGCCTTACCCCGGTGCCCCTTACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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