Protein ID | Ophio5|2917 |
Gene name | |
Location | scaffold_232:22840..24042 |
Strand | + |
Gene length (bp) | 1202 |
Transcript length (bp) | 1086 |
Coding sequence length (bp) | 1083 |
Protein length (aa) | 361 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00487 | FA_desaturase | Fatty acid desaturase | 2.1E-25 | 77 | 317 |
PF08557 | Lipid_DES | Sphingolipid Delta4-desaturase (DES) | 2.3E-18 | 13 | 47 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|C4R613|DEGS_PICPG | Sphingolipid delta(4)-desaturase OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr3_0939 PE=1 SV=2 | 12 | 346 | 6.0E-131 |
sp|O59715|DEGS_SCHPO | Sphingolipid delta(4)-desaturase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dsd1 PE=1 SV=1 | 7 | 352 | 1.0E-123 |
sp|Q5AJX2|DEGS_CANAL | Sphingolipid delta(4)-desaturase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DES1 PE=1 SV=1 | 3 | 344 | 1.0E-121 |
sp|Q6H5U3|DES1L_ORYSJ | Sphingolipid delta(4)-desaturase DES1-like OS=Oryza sativa subsp. japonica GN=Os02g0639600 PE=2 SV=1 | 15 | 344 | 5.0E-100 |
sp|Q9ZPH4|DES1L_ARATH | Sphingolipid delta(4)-desaturase DES1-like OS=Arabidopsis thaliana GN=At4g04930 PE=2 SV=1 | 15 | 345 | 1.0E-94 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|C4R613|DEGS_PICPG | Sphingolipid delta(4)-desaturase OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr3_0939 PE=1 SV=2 | 12 | 346 | 6.0E-131 |
sp|O59715|DEGS_SCHPO | Sphingolipid delta(4)-desaturase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dsd1 PE=1 SV=1 | 7 | 352 | 1.0E-123 |
sp|Q5AJX2|DEGS_CANAL | Sphingolipid delta(4)-desaturase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DES1 PE=1 SV=1 | 3 | 344 | 1.0E-121 |
sp|Q6H5U3|DES1L_ORYSJ | Sphingolipid delta(4)-desaturase DES1-like OS=Oryza sativa subsp. japonica GN=Os02g0639600 PE=2 SV=1 | 15 | 344 | 5.0E-100 |
sp|Q9ZPH4|DES1L_ARATH | Sphingolipid delta(4)-desaturase DES1-like OS=Arabidopsis thaliana GN=At4g04930 PE=2 SV=1 | 15 | 345 | 1.0E-94 |
sp|Q6QHC5|DEGS2_HUMAN | Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 OS=Homo sapiens GN=DEGS2 PE=1 SV=2 | 8 | 340 | 1.0E-86 |
sp|Q68FB8|DEGS1_XENTR | Sphingolipid delta(4)-desaturase DES1 OS=Xenopus tropicalis GN=degs1 PE=2 SV=1 | 8 | 347 | 5.0E-85 |
sp|Q3ZBY7|DEGS1_BOVIN | Sphingolipid delta(4)-desaturase DES1 OS=Bos taurus GN=DEGS1 PE=2 SV=1 | 15 | 340 | 1.0E-84 |
sp|Q0II71|DEGS2_BOVIN | Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 OS=Bos taurus GN=DEGS2 PE=2 SV=1 | 15 | 340 | 2.0E-84 |
sp|Q564G3|DEGS2_RAT | Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 OS=Rattus norvegicus GN=Degs2 PE=1 SV=1 | 8 | 346 | 4.0E-84 |
sp|Q5F3C1|DEGS1_CHICK | Sphingolipid delta(4)-desaturase DES1 OS=Gallus gallus GN=DEGS1 PE=2 SV=1 | 8 | 347 | 8.0E-84 |
sp|Q8R2F2|DEGS2_MOUSE | Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 OS=Mus musculus GN=Degs2 PE=1 SV=1 | 8 | 345 | 2.0E-83 |
sp|G5EC63|DEGS2_CAEEL | Putative sphingolipid delta(4)-desaturase/C4-monooxygenase OS=Caenorhabditis elegans GN=ttm-5 PE=3 SV=1 | 15 | 341 | 3.0E-83 |
sp|Q6UQ04|DEGS1_MICFO | Sphingolipid delta(4)-desaturase DES1 OS=Microtus fortis GN=DEGS1 PE=2 SV=1 | 15 | 340 | 8.0E-83 |
sp|Q5XIF5|DEGS1_RAT | Sphingolipid delta(4)-desaturase DES1 OS=Rattus norvegicus GN=Degs1 PE=2 SV=1 | 15 | 340 | 7.0E-82 |
sp|O09005|DEGS1_MOUSE | Sphingolipid delta(4)-desaturase DES1 OS=Mus musculus GN=Degs1 PE=1 SV=1 | 15 | 340 | 7.0E-81 |
sp|O15121|DEGS1_HUMAN | Sphingolipid delta(4)-desaturase DES1 OS=Homo sapiens GN=DEGS1 PE=1 SV=1 | 15 | 345 | 2.0E-80 |
sp|Q5RE51|DEGS1_PONAB | Sphingolipid delta(4)-desaturase DES1 OS=Pongo abelii GN=DEGS1 PE=2 SV=1 | 15 | 345 | 2.0E-80 |
sp|O44186|DEGS1_CAEEL | Putative sphingolipid delta(4)-desaturase OS=Caenorhabditis elegans GN=F33D4.4 PE=3 SV=1 | 9 | 344 | 1.0E-79 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006629 | lipid metabolic process | Yes |
GO:0071704 | organic substance metabolic process | No |
GO:0044238 | primary metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0008150 | biological_process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 57 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 51 | 73 | 22 |
2 | 77 | 96 | 19 |
3 | 108 | 130 | 22 |
4 | 156 | 178 | 22 |
5 | 204 | 226 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|2917 MFTKPITAGTTPEHDFFWTYTEEPHRTRRLAIIKAHPEVTKLCGPEPMTKYLVAAVVTLQIMVAWLLSDTTFWSL RFWLVAYVIGASANQNLFLAIHEISHNLAFRKPLANRLFAVFANLPIGVPYSASFRPYHLTHHKSLGVDGVDTDL PTALEAVLLDSLLGKAFFCTFQIFFYAIRPMAVYRVPFTWLHAFNVVVQVAFDIILVRLFSPTALAYLVLSSFLA GSLHPLAAHFIAEHYVYDLVSHIQRSNDGGKNGAVATCPVPETFSYYGPLNWLTYNVGLHNEHHDFPAIPWSRLP ALRAIADDFYRDLPCHHSWSYALWRFIWDDGVGITCRVKRENAKDRKPVAAVKWAESEIQA |
Coding | >Ophio5|2917 ATGTTCACGAAGCCTATCACCGCAGGCACGACGCCCGAGCATGACTTCTTCTGGACCTACACCGAAGAGCCACAC CGAACACGCCGCCTCGCCATCATCAAAGCCCACCCCGAGGTCACCAAGCTATGCGGTCCCGAGCCTATGACAAAA TACCTTGTCGCCGCCGTCGTTACCCTTCAGATCATGGTCGCATGGCTCCTCTCCGACACGACGTTTTGGTCGTTG CGCTTTTGGTTGGTTGCGTATGTGATTGGAGCGAGCGCGAATCAAAACCTTTTTCTGGCCATCCATGAGATTTCG CATAATTTGGCGTTTCGGAAGCCTTTGGCGAATAGGCTTTTTGCCGTTTTTGCGAACTTGCCCATCGGCGTGCCG TATAGTGCTTCGTTTCGCCCATATCACCTCACACATCACAAGTCTCTTGGTGTCGACGGCGTCGATACGGATCTA CCCACCGCGCTCGAGGCAGTTCTTCTCGACTCCCTACTCGGCAAGGCCTTCTTCTGCACCTTTCAGATATTCTTT TACGCCATCCGTCCTATGGCCGTCTACCGCGTTCCTTTTACCTGGTTGCACGCTTTCAACGTCGTCGTCCAGGTG GCTTTCGACATCATCCTCGTTCGACTCTTTTCCCCTACTGCTCTTGCTTATCTCGTTCTCTCGTCCTTTCTCGCT GGTAGCTTGCACCCGCTTGCTGCGCATTTCATCGCTGAGCATTACGTCTATGATCTCGTCTCTCATATCCAGCGC AGCAACGATGGGGGAAAAAACGGTGCTGTAGCTACCTGCCCCGTACCGGAGACCTTTTCTTACTATGGCCCTCTA AATTGGCTCACCTACAATGTCGGCCTGCACAATGAACATCACGACTTTCCAGCTATTCCCTGGTCTCGTCTTCCC GCCTTGCGAGCCATCGCTGACGACTTCTATCGGGACCTTCCCTGTCATCATAGTTGGTCCTACGCTCTCTGGCGC TTCATCTGGGATGATGGCGTTGGCATCACCTGTCGCGTCAAGCGCGAGAATGCAAAGGACAGGAAGCCAGTGGCC GCTGTGAAGTGGGCTGAGTCGGAGATTCAGGCT |
Transcript | >Ophio5|2917 ATGTTCACGAAGCCTATCACCGCAGGCACGACGCCCGAGCATGACTTCTTCTGGACCTACACCGAAGAGCCACAC CGAACACGCCGCCTCGCCATCATCAAAGCCCACCCCGAGGTCACCAAGCTATGCGGTCCCGAGCCTATGACAAAA TACCTTGTCGCCGCCGTCGTTACCCTTCAGATCATGGTCGCATGGCTCCTCTCCGACACGACGTTTTGGTCGTTG CGCTTTTGGTTGGTTGCGTATGTGATTGGAGCGAGCGCGAATCAAAACCTTTTTCTGGCCATCCATGAGATTTCG CATAATTTGGCGTTTCGGAAGCCTTTGGCGAATAGGCTTTTTGCCGTTTTTGCGAACTTGCCCATCGGCGTGCCG TATAGTGCTTCGTTTCGCCCATATCACCTCACACATCACAAGTCTCTTGGTGTCGACGGCGTCGATACGGATCTA CCCACCGCGCTCGAGGCAGTTCTTCTCGACTCCCTACTCGGCAAGGCCTTCTTCTGCACCTTTCAGATATTCTTT TACGCCATCCGTCCTATGGCCGTCTACCGCGTTCCTTTTACCTGGTTGCACGCTTTCAACGTCGTCGTCCAGGTG GCTTTCGACATCATCCTCGTTCGACTCTTTTCCCCTACTGCTCTTGCTTATCTCGTTCTCTCGTCCTTTCTCGCT GGTAGCTTGCACCCGCTTGCTGCGCATTTCATCGCTGAGCATTACGTCTATGATCTCGTCTCTCATATCCAGCGC AGCAACGATGGGGGAAAAAACGGTGCTGTAGCTACCTGCCCCGTACCGGAGACCTTTTCTTACTATGGCCCTCTA AATTGGCTCACCTACAATGTCGGCCTGCACAATGAACATCACGACTTTCCAGCTATTCCCTGGTCTCGTCTTCCC GCCTTGCGAGCCATCGCTGACGACTTCTATCGGGACCTTCCCTGTCATCATAGTTGGTCCTACGCTCTCTGGCGC TTCATCTGGGATGATGGCGTTGGCATCACCTGTCGCGTCAAGCGCGAGAATGCAAAGGACAGGAAGCCAGTGGCC GCTGTGAAGTGGGCTGAGTCGGAGATTCAGGCTTGA |
Gene | >Ophio5|2917 ATGTTCACGAAGCCTATCACCGCAGGCACGACGCCCGAGCATGACTTCTTCTGGACCTACACCGAAGAGCCACAC CGAACACGCCGCCTCGCCATCATCAAAGCCCACCCCGAGGTCAGCCTCCCCGCCCCGGTCTCAGCCTTAAACTCT ACGCCTAACACACAACCTCTTATCAGGTCACCAAGCTATGCGGTCCCGAGCCTATGACAAAATACCTTGTCGCCG CCGTCGTTACCCTTCAGATCATGGTCGCATGGCTCCTCTCCGACACGACGTTTTGGTCGTTGCGCTTTTGGTTGG TTGCGTATGTGATTGGAGCGAGCGCGAATCAAAACCTTTTTCTGGCCATCCATGAGATTTCGCATAATTTGGCGT TTCGGAAGCCTTTGGCGAATAGGCTTTTTGCCGTTTTTGCGAACTTGCCCATCGGCGTGCCGTATAGTGCTTCGT TTCGCGTACGTTCTTTTGATCGTTTTGGTTCTCATGTGTATTGACTGACTCGCTTTTAGCCATATCACCTCACAC ATCACAAGTCTCTTGGTGTCGACGGCGTCGATACGGATCTACCCACCGCGCTCGAGGCAGTTCTTCTCGACTCCC TACTCGGCAAGGCCTTCTTCTGCACCTTTCAGATATTCTTTTACGCCATCCGTCCTATGGCCGTCTACCGCGTTC CTTTTACCTGGTTGCACGCTTTCAACGTCGTCGTCCAGGTGGCTTTCGACATCATCCTCGTTCGACTCTTTTCCC CTACTGCTCTTGCTTATCTCGTTCTCTCGTCCTTTCTCGCTGGTAGCTTGCACCCGCTTGCTGCGCATTTCATCG CTGAGCATTACGTCTATGATCTCGTCTCTCATATCCAGCGCAGCAACGATGGGGGAAAAAACGGTGCTGTAGCTA CCTGCCCCGTACCGGAGACCTTTTCTTACTATGGCCCTCTAAATTGGCTCACCTACAATGTCGGCCTGCACAATG AACATCACGACTTTCCAGCTATTCCCTGGTCTCGTCTTCCCGCCTTGCGAGCCATCGCTGACGACTTCTATCGGG ACCTTCCCTGTCATCATAGTTGGTCCTACGCTCTCTGGCGCTTCATCTGGGATGATGGCGTTGGCATCACCTGTC GCGTCAAGCGCGAGAATGCAAAGGACAGGAAGCCAGTGGCCGCTGTGAAGTGGGCTGAGTCGGAGATTCAGGCTT GA |