Protein ID | Ophio5|2915 |
Gene name | |
Location | scaffold_232:15695..17049 |
Strand | - |
Gene length (bp) | 1354 |
Transcript length (bp) | 1296 |
Coding sequence length (bp) | 1293 |
Protein length (aa) | 431 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08426 | ICE2 | ICE2 | 3.7E-153 | 7 | 420 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O13909|YDW1_SCHPO | Uncharacterized protein C23C11.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23C11.01 PE=4 SV=1 | 1 | 431 | 2.0E-54 |
sp|P40499|ICE2_YEAST | Protein ICE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ICE2 PE=1 SV=1 | 13 | 419 | 4.0E-41 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Endoplasmic reticulum | Signal peptide|Transmembrane domain | 0.0829 | 0.2134 | 0.0753 | 0.1784 | 0.2152 | 0.076 | 0.8964 | 0.3867 | 0.5185 | 0.0353 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 2 | 24 | 22 |
2 | 34 | 53 | 19 |
3 | 66 | 88 | 22 |
4 | 139 | 161 | 22 |
5 | 174 | 196 | 22 |
6 | 206 | 225 | 19 |
7 | 232 | 249 | 17 |
8 | 302 | 324 | 22 |
9 | 358 | 380 | 22 |
10 | 400 | 422 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 3960 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|2915 MWWLFSVLLGFVFLLSIVLSIPVAFDVGGRDSGLAYSLSLFIYYLAYSAIRIATSDGSRFGRSVSAALRLSQWIV IPALMIWALGQFAVDAGSTDWVERTVGGVFRSKSTTWTGWLFGKDGVLETVMLGIWDSCLKYSGPMFQLIEGFCT LLVIQAAGQITRWLVNRGRSDTWLIILLALSGSIMASSIYFLWRVIQFPQIGNLDATLIGIAMTTAIFLCAYGIG SGRGNPVESSLLFAYVVLCIYQIFTDYQPSDGTGQADDQAAAQPDIPPLPPIIMASYSTLLHMVGSLPSALHSSL ALLYAAFQTITPSVIISLMYRLLVFYSATRIIPSVRDLGARALTHEPDFEDSETANKVLGLLSWFSPSILVAVYT SLLLQHFSTNDGPDGWTLRGGDVGGSTWRWINVGLTMFLYGIELYLIDEQEHWKAD |
Coding | >Ophio5|2915 ATGTGGTGGCTATTCAGCGTCCTGCTCGGCTTCGTCTTCCTCCTCAGCATCGTCCTTTCCATCCCCGTCGCCTTC GATGTCGGCGGTCGCGACAGCGGGCTGGCTTACAGCCTGTCGCTCTTCATCTACTACCTCGCCTATTCGGCCATC CGCATCGCCACCTCGGATGGGTCTCGCTTCGGACGGTCCGTGTCGGCAGCCCTGCGCCTGTCGCAATGGATCGTT ATCCCGGCGCTGATGATCTGGGCTCTCGGCCAGTTTGCCGTCGACGCGGGGAGCACCGACTGGGTAGAGAGGACT GTCGGCGGCGTCTTTCGCTCCAAAAGCACCACCTGGACTGGTTGGCTGTTTGGCAAGGACGGTGTACTGGAGACG GTCATGCTGGGCATATGGGACAGCTGCCTCAAGTATTCGGGGCCCATGTTCCAACTGATCGAAGGCTTTTGCACC CTGCTGGTCATCCAGGCCGCAGGGCAAATTACCCGCTGGCTCGTCAACCGGGGGAGGAGTGACACCTGGCTGATT ATCCTCCTCGCTCTATCAGGCTCCATTATGGCCAGCTCCATATATTTCCTGTGGCGCGTCATTCAATTCCCACAG ATTGGCAATCTGGACGCCACCCTCATCGGCATCGCCATGACGACGGCCATCTTCCTCTGCGCCTACGGAATCGGC AGCGGCCGAGGCAACCCGGTCGAGAGCTCACTATTGTTTGCCTACGTCGTCCTCTGCATCTACCAGATTTTTACC GACTACCAACCGTCGGACGGAACCGGGCAGGCCGACGACCAGGCTGCGGCGCAGCCGGACATTCCGCCGCTGCCG CCCATCATCATGGCGTCATACTCGACGCTACTGCACATGGTCGGCTCGCTGCCCTCGGCGCTACACTCGTCCCTG GCGCTGTTGTACGCGGCCTTTCAGACGATCACGCCGTCGGTCATCATCTCGCTCATGTACCGGCTCCTCGTCTTC TACTCGGCCACGCGCATCATCCCCTCGGTGCGGGACCTGGGCGCCCGGGCGCTGACGCATGAGCCGGACTTTGAG GACTCGGAGACGGCCAACAAGGTGCTGGGCCTCCTGAGCTGGTTCTCGCCGTCGATCCTGGTGGCTGTCTACACG AGCCTGCTTCTGCAGCACTTTTCGACAAACGACGGACCCGACGGCTGGACGCTCCGTGGCGGCGACGTCGGCGGT AGCACGTGGCGCTGGATCAACGTCGGCCTGACCATGTTTCTCTACGGCATCGAGCTCTATCTTATCGACGAGCAG GAACACTGGAAGGCGGAT |
Transcript | >Ophio5|2915 ATGTGGTGGCTATTCAGCGTCCTGCTCGGCTTCGTCTTCCTCCTCAGCATCGTCCTTTCCATCCCCGTCGCCTTC GATGTCGGCGGTCGCGACAGCGGGCTGGCTTACAGCCTGTCGCTCTTCATCTACTACCTCGCCTATTCGGCCATC CGCATCGCCACCTCGGATGGGTCTCGCTTCGGACGGTCCGTGTCGGCAGCCCTGCGCCTGTCGCAATGGATCGTT ATCCCGGCGCTGATGATCTGGGCTCTCGGCCAGTTTGCCGTCGACGCGGGGAGCACCGACTGGGTAGAGAGGACT GTCGGCGGCGTCTTTCGCTCCAAAAGCACCACCTGGACTGGTTGGCTGTTTGGCAAGGACGGTGTACTGGAGACG GTCATGCTGGGCATATGGGACAGCTGCCTCAAGTATTCGGGGCCCATGTTCCAACTGATCGAAGGCTTTTGCACC CTGCTGGTCATCCAGGCCGCAGGGCAAATTACCCGCTGGCTCGTCAACCGGGGGAGGAGTGACACCTGGCTGATT ATCCTCCTCGCTCTATCAGGCTCCATTATGGCCAGCTCCATATATTTCCTGTGGCGCGTCATTCAATTCCCACAG ATTGGCAATCTGGACGCCACCCTCATCGGCATCGCCATGACGACGGCCATCTTCCTCTGCGCCTACGGAATCGGC AGCGGCCGAGGCAACCCGGTCGAGAGCTCACTATTGTTTGCCTACGTCGTCCTCTGCATCTACCAGATTTTTACC GACTACCAACCGTCGGACGGAACCGGGCAGGCCGACGACCAGGCTGCGGCGCAGCCGGACATTCCGCCGCTGCCG CCCATCATCATGGCGTCATACTCGACGCTACTGCACATGGTCGGCTCGCTGCCCTCGGCGCTACACTCGTCCCTG GCGCTGTTGTACGCGGCCTTTCAGACGATCACGCCGTCGGTCATCATCTCGCTCATGTACCGGCTCCTCGTCTTC TACTCGGCCACGCGCATCATCCCCTCGGTGCGGGACCTGGGCGCCCGGGCGCTGACGCATGAGCCGGACTTTGAG GACTCGGAGACGGCCAACAAGGTGCTGGGCCTCCTGAGCTGGTTCTCGCCGTCGATCCTGGTGGCTGTCTACACG AGCCTGCTTCTGCAGCACTTTTCGACAAACGACGGACCCGACGGCTGGACGCTCCGTGGCGGCGACGTCGGCGGT AGCACGTGGCGCTGGATCAACGTCGGCCTGACCATGTTTCTCTACGGCATCGAGCTCTATCTTATCGACGAGCAG GAACACTGGAAGGCGGATTGA |
Gene | >Ophio5|2915 ATGTGGTGGCTATTCAGCGTCCTGCTCGGCTTCGTCTTCCTCCTCAGCATCGTCCTTTCCATCCCCGTCGCCTTC GATGTCGGCGGTCGCGACAGCGGGCTGGCTTACAGCCTGTCGCTCTTCATCTACTACCTCGCCTATTCGGCCATC CGCATCGCCACCTCGGATGGGTCTCGCTTCGGACGGTCCGTGTCGGCAGCCCTGCGCCTGTCGCAATGGATCGTT ATCCCGGCGCTGATGATCTGGGCTCTCGGCCAGTTTGCCGTCGACGCGGGGAGCACCGACTGGGTAGAGAGGACT GTCGGCGGCGTCTTTCGCTCCAAAAGCACCACCTGGACTGGTTGGCTGTTTGGCAAGGACGGTGTACTGGAGACG GTCATGCTGGGCATATGGGACAGCTGCCTCAAGTATTCGGGGCCCATGTTCCAACTGATCGAAGGCTTTTGCACC CTGCTGGTCATCCAGGCCGCAGGGCAAATTACCCGCTGGCTCGTCAACCGGGGGAGGAGTGACACCTGGCTGGTG AGCGGTGCCATACATGCTCCCTCTTGATACTTCTTTCAAAACTGATAGCACGCAGATTATCCTCCTCGCTCTATC AGGCTCCATTATGGCCAGCTCCATATATTTCCTGTGGCGCGTCATTCAATTCCCACAGATTGGCAATCTGGACGC CACCCTCATCGGCATCGCCATGACGACGGCCATCTTCCTCTGCGCCTACGGAATCGGCAGCGGCCGAGGCAACCC GGTCGAGAGCTCACTATTGTTTGCCTACGTCGTCCTCTGCATCTACCAGATTTTTACCGACTACCAACCGTCGGA CGGAACCGGGCAGGCCGACGACCAGGCTGCGGCGCAGCCGGACATTCCGCCGCTGCCGCCCATCATCATGGCGTC ATACTCGACGCTACTGCACATGGTCGGCTCGCTGCCCTCGGCGCTACACTCGTCCCTGGCGCTGTTGTACGCGGC CTTTCAGACGATCACGCCGTCGGTCATCATCTCGCTCATGTACCGGCTCCTCGTCTTCTACTCGGCCACGCGCAT CATCCCCTCGGTGCGGGACCTGGGCGCCCGGGCGCTGACGCATGAGCCGGACTTTGAGGACTCGGAGACGGCCAA CAAGGTGCTGGGCCTCCTGAGCTGGTTCTCGCCGTCGATCCTGGTGGCTGTCTACACGAGCCTGCTTCTGCAGCA CTTTTCGACAAACGACGGACCCGACGGCTGGACGCTCCGTGGCGGCGACGTCGGCGGTAGCACGTGGCGCTGGAT CAACGTCGGCCTGACCATGTTTCTCTACGGCATCGAGCTCTATCTTATCGACGAGCAGGAACACTGGAAGGCGGA TTGA |