Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|291
Gene name
Locationscaffold_106:38420..39240
Strand+
Gene length (bp)820
Transcript length (bp)747
Coding sequence length (bp)744
Protein length (aa) 248

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 203 225 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|291
MGINRRRPPLLLLLLLLLVAAATSAFANVEKIIFPGPPTANIPSAKPSLADLALDTLTPQRSALRTNLSRVFAAA
EGLASRGQSSWLLLNDLAEGQRYELRVCWAAVEPTSFALDVYQLDHVWRTPELIQSLAEYASKRHDLMGNTVTAQ
ARQPSPQSIERKSSVLLLHIRAAADYFTDDEQLMKHPPPVLVDLILDPFLYNVIPLSLVPTAGYLVLVSVITWFL
AQWIASSLESVARSPEGHAKKHD
Coding >Ophio5|291
ATGGGTATCAATCGTAGACGCCCGCCGTTGCTCCTCCTCCTCCTCCTCCTCCTCGTCGCCGCAGCCACCAGCGCA
TTCGCCAACGTCGAAAAGATCATCTTCCCCGGCCCGCCAACAGCCAACATCCCCTCTGCCAAGCCCTCACTCGCC
GACCTCGCCCTCGACACTCTCACTCCACAGCGCTCCGCTCTTCGCACCAACCTTAGCCGCGTCTTTGCCGCCGCA
GAGGGACTCGCCTCCCGCGGCCAGTCGTCCTGGCTGCTTCTCAATGATCTTGCCGAGGGCCAGAGGTACGAGCTG
CGCGTGTGCTGGGCCGCCGTTGAACCGACCAGCTTCGCTCTCGACGTCTACCAACTCGACCACGTCTGGCGCACG
CCGGAGCTCATCCAATCCTTGGCAGAGTATGCGTCCAAGCGTCACGACTTGATGGGCAATACCGTAACCGCCCAG
GCGCGACAGCCGTCACCGCAATCCATCGAGCGCAAGAGCTCGGTCCTGCTCCTCCATATTCGCGCTGCGGCCGAC
TACTTCACCGATGACGAACAGCTCATGAAGCATCCCCCCCCCGTCCTCGTCGATCTCATCCTTGACCCGTTTCTG
TACAACGTGATTCCGCTGTCCTTGGTCCCGACCGCAGGGTACCTCGTCCTCGTCAGCGTCATCACTTGGTTTCTC
GCTCAGTGGATCGCCTCCAGCCTCGAGTCTGTCGCTCGATCTCCCGAGGGACATGCGAAAAAGCATGAC
Transcript >Ophio5|291
ATGGGTATCAATCGTAGACGCCCGCCGTTGCTCCTCCTCCTCCTCCTCCTCCTCGTCGCCGCAGCCACCAGCGCA
TTCGCCAACGTCGAAAAGATCATCTTCCCCGGCCCGCCAACAGCCAACATCCCCTCTGCCAAGCCCTCACTCGCC
GACCTCGCCCTCGACACTCTCACTCCACAGCGCTCCGCTCTTCGCACCAACCTTAGCCGCGTCTTTGCCGCCGCA
GAGGGACTCGCCTCCCGCGGCCAGTCGTCCTGGCTGCTTCTCAATGATCTTGCCGAGGGCCAGAGGTACGAGCTG
CGCGTGTGCTGGGCCGCCGTTGAACCGACCAGCTTCGCTCTCGACGTCTACCAACTCGACCACGTCTGGCGCACG
CCGGAGCTCATCCAATCCTTGGCAGAGTATGCGTCCAAGCGTCACGACTTGATGGGCAATACCGTAACCGCCCAG
GCGCGACAGCCGTCACCGCAATCCATCGAGCGCAAGAGCTCGGTCCTGCTCCTCCATATTCGCGCTGCGGCCGAC
TACTTCACCGATGACGAACAGCTCATGAAGCATCCCCCCCCCGTCCTCGTCGATCTCATCCTTGACCCGTTTCTG
TACAACGTGATTCCGCTGTCCTTGGTCCCGACCGCAGGGTACCTCGTCCTCGTCAGCGTCATCACTTGGTTTCTC
GCTCAGTGGATCGCCTCCAGCCTCGAGTCTGTCGCTCGATCTCCCGAGGGACATGCGAAAAAGCATGACTAG
Gene >Ophio5|291
ATGGGTATCAATCGTAGACGCCCGCCGTTGCTCCTCCTCCTCCTCCTCCTCCTCGTCGCCGCAGCCACCAGCGCA
TTCGCCAACGTCGAAAAGATCATCTTCCCCGGCCCGCCAACAGCCAACATCCCCTCTGCCAAGCCCTCACTCGCC
GACCTCGCCCTCGACACTCTCACTCCACAGCGCTCCGCTCTTCGCACCAACCTTAGCCGCGTCTTTGCCGCCGCA
GAGGGACTCGCCTCCCGCGGCCAGTCGTCCTGGCTGCTTCTCAATGATCTTGCCGAGGGCCAGAGGTACGAGCTG
CGCGTGTGCTGGGCCGCCGTTGTGAGTTGTCCGTGCCGAGGGAGGTGGCACTTTGCAACGAGGCCGAGATATATA
ACCTCCATTGTCTTCGTAGGAACCGACCAGCTTCGCTCTCGACGTCTACCAACTCGACCACGTCTGGCGCACGCC
GGAGCTCATCCAATCCTTGGCAGAGTATGCGTCCAAGCGTCACGACTTGATGGGCAATACCGTAACCGCCCAGGC
GCGACAGCCGTCACCGCAATCCATCGAGCGCAAGAGCTCGGTCCTGCTCCTCCATATTCGCGCTGCGGCCGACTA
CTTCACCGATGACGAACAGCTCATGAAGCATCCCCCCCCCGTCCTCGTCGATCTCATCCTTGACCCGTTTCTGTA
CAACGTGATTCCGCTGTCCTTGGTCCCGACCGCAGGGTACCTCGTCCTCGTCAGCGTCATCACTTGGTTTCTCGC
TCAGTGGATCGCCTCCAGCCTCGAGTCTGTCGCTCGATCTCCCGAGGGACATGCGAAAAAGCATGACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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