Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2866
Gene name
Locationscaffold_23:24185..24729
Strand-
Gene length (bp)544
Transcript length (bp)465
Coding sequence length (bp)462
Protein length (aa) 154

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01284 MARVEL Membrane-associating domain 6.8E-15 9 135

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane|Lysosome/Vacuole Signal peptide|Transmembrane domain 0.0738 0.0983 0.2142 0.6003 0.0913 0.0045 0.2881 0.8345 0.4234 0.0072

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 44 66 22
3 78 100 22
4 120 142 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup4307
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3305
Ophiocordyceps australis map64 (Brazil) OphauB2|5015
Ophiocordyceps camponoti-floridani Ophcf2|02184
Ophiocordyceps camponoti-rufipedis Ophun1|1482
Ophiocordyceps kimflemingae Ophio5|2866 (this protein)
Ophiocordyceps subramaniannii Hirsu2|8833

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2866
MSALDRIVSLILRAAEIAFAVIVAAVTGYYLHNNSGSAWSLARFIYTEVVAGISILLGLLWLLPFASTFSHWPAD
IFISLLWWASFALLVNLVGTSCGAIFDWQNVSPTGDECGRVKADIAFAFLSAVVWLASALVGLFWTGRHERRSMR
RSRV
Coding >Ophio5|2866
ATGTCGGCGCTCGACCGAATCGTCAGCCTCATCCTGCGGGCGGCCGAAATCGCTTTCGCCGTCATCGTCGCCGCC
GTCACGGGCTATTATCTACACAACAACAGCGGTAGCGCCTGGAGCCTGGCGCGCTTCATATATACTGAGGTGGTG
GCGGGTATATCCATCCTACTCGGACTACTCTGGCTGCTCCCCTTTGCCAGTACGTTCTCGCACTGGCCGGCAGAC
ATCTTCATCAGTTTGCTATGGTGGGCGTCGTTTGCGCTGCTCGTCAACCTCGTCGGCACATCTTGTGGCGCAATC
TTCGATTGGCAAAATGTTTCTCCTACGGGTGATGAGTGTGGCCGAGTCAAGGCCGATATCGCCTTCGCGTTCTTG
TCGGCTGTAGTGTGGTTGGCTTCTGCCTTGGTTGGATTGTTCTGGACCGGGCGTCACGAGAGGCGGTCCATGCGG
CGAAGCAGGGTT
Transcript >Ophio5|2866
ATGTCGGCGCTCGACCGAATCGTCAGCCTCATCCTGCGGGCGGCCGAAATCGCTTTCGCCGTCATCGTCGCCGCC
GTCACGGGCTATTATCTACACAACAACAGCGGTAGCGCCTGGAGCCTGGCGCGCTTCATATATACTGAGGTGGTG
GCGGGTATATCCATCCTACTCGGACTACTCTGGCTGCTCCCCTTTGCCAGTACGTTCTCGCACTGGCCGGCAGAC
ATCTTCATCAGTTTGCTATGGTGGGCGTCGTTTGCGCTGCTCGTCAACCTCGTCGGCACATCTTGTGGCGCAATC
TTCGATTGGCAAAATGTTTCTCCTACGGGTGATGAGTGTGGCCGAGTCAAGGCCGATATCGCCTTCGCGTTCTTG
TCGGCTGTAGTGTGGTTGGCTTCTGCCTTGGTTGGATTGTTCTGGACCGGGCGTCACGAGAGGCGGTCCATGCGG
CGAAGCAGGGTTTAG
Gene >Ophio5|2866
ATGTCGGCGCTCGACCGAATCGTCAGCCTCATCCTGCGGGCGGCCGAAATCGCTTTCGCCGTCATCGTCGCCGCC
GTCACGGGCTATTATCTACACAACAACAGCGGTAGCGCCTGGAGCCTGGCGCGCTTCATATATACTGAGGTGGTG
GCGGGTATATCCATCCTACTCGGACTACTCTGGCTGCTCCCCTTTGCCAGTACGTTCTCGCACTGGCCGGCAGAC
ATCTTCATCAGTTTGCTATGGTGGGCGTCGTTTGCGCTGCTCGTCAACGTGAGTTTCCCACACATTTCCGTATTT
TTTCGAAGTTTACTGACGCGAGGGGGGGGTTGCGAAAAAAAAAAAAAAAAAGCTCGTCGGCACATCTTGTGGCGC
AATCTTCGATTGGCAAAATGTTTCTCCTACGGGTGATGAGTGTGGCCGAGTCAAGGCCGATATCGCCTTCGCGTT
CTTGTCGGCTGTAGTGTGGTTGGCTTCTGCCTTGGTTGGATTGTTCTGGACCGGGCGTCACGAGAGGCGGTCCAT
GCGGCGAAGCAGGGTTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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