Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2860
Gene name
Locationscaffold_23:6943..8928
Strand-
Gene length (bp)1985
Transcript length (bp)1686
Coding sequence length (bp)1683
Protein length (aa) 561

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00999 Na_H_Exchanger Sodium/hydrogen exchanger family 2.1E-36 20 460

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q99271|NAH1_YEAST Na(+)/H(+) antiporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NHA1 PE=1 SV=1 4 458 3.0E-79
sp|Q99173|NAH1_ZYGRO Na(+)/H(+) antiporter 1 OS=Zygosaccharomyces rouxii GN=SOD2 PE=3 SV=1 4 470 3.0E-78
sp|O42701|NAH2_ZYGRO Na(+)/H(+) antiporter 2 OS=Zygosaccharomyces rouxii GN=SOD22 PE=3 SV=1 4 468 7.0E-78
sp|O14123|NAH2_SCHPO Probable Na(+)/H(+) antiporter C3A11.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sod22 PE=1 SV=1 4 458 3.0E-75
sp|P36606|NAH_SCHPO Na(+)/H(+) antiporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sod2 PE=1 SV=1 4 461 1.0E-58

GO

GO Term Description Terminal node
GO:0006812 cation transport Yes
GO:0015299 solute:proton antiporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0016021 integral component of membrane Yes
GO:0008150 biological_process No
GO:0022857 transmembrane transporter activity No
GO:0022804 active transmembrane transporter activity No
GO:0015297 antiporter activity No
GO:0031224 intrinsic component of membrane No
GO:0051234 establishment of localization No
GO:0006810 transport No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0110165 cellular anatomical entity No
GO:0009987 cellular process No
GO:0015298 solute:cation antiporter activity No
GO:0005575 cellular_component No
GO:0015291 secondary active transmembrane transporter activity No
GO:0006811 ion transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 10 27 17
2 34 56 22
3 71 93 22
4 106 128 22
5 241 263 22
6 276 298 22
7 333 352 19
8 365 383 18
9 398 415 17
10 442 464 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2860
MVTLDVSELNIVLSVLGTFIVCYGIISVKIKQKWYLGEALPAMMIGIILGPVATRFIDSERWASAEKGQTAAIAL
GVTRVMIGLQLVIAGYQLPAKYNLTRWKEMAMCLLPIMTIMWLCTTLCILGTVPKVTLLAALVIGSCVTCTDPIL
SQAIAKGPFADKFVPRHLREIISSEAGANDGFGFPFLMLAVFLIRHADLKSEGAVEAAGGAVRMLFAREEEVGRL
GGGVGVAIRNWFLETWLYTVLLSVLYGAVVGYGSCWAIKHALRKKWIDTESYLLFPSALGMFIVGTCGAIGTDDL
LACFVAGNALNWDGEYLAETERRHDEVNSCIDVLLNFGGFMFIGSIMPWSAFNDPNGTGLTVGRLIGLGLLVLLF
RRIPAIFISYKLMPSVVKNYKEALFMGYFGPIGAGAVFYVEHTRHLFPEAGKGDTEENDLTKVMIPVVYWLVFFS
IIFHGLSIPALDAIYRYMGVKPIQEDSAEIRRRSSRVATPPNAVPGSRDTFIAYNRFSRPVSESLSLPMSRNQAP
PFDDYSGFSKSSQGSLPFEQIEQAPSRRIQPPTTYI
Coding >Ophio5|2860
ATGGTGACCTTGGACGTCTCCGAGCTCAACATTGTGCTCTCAGTGCTGGGCACCTTTATCGTGTGCTATGGCATC
ATCTCTGTCAAGATCAAGCAGAAATGGTATCTCGGTGAAGCCCTGCCCGCCATGATGATTGGCATCATCCTCGGT
CCTGTAGCTACCAGATTTATCGACAGCGAAAGGTGGGCGTCAGCGGAAAAGGGGCAGACTGCGGCGATTGCACTG
GGTGTGACAAGAGTCATGATAGGCCTTCAGCTGGTCATTGCCGGCTATCAGCTCCCAGCAAAGTACAACCTCACT
CGGTGGAAAGAAATGGCCATGTGTCTGCTCCCCATCATGACCATCATGTGGCTCTGCACCACACTATGCATCCTG
GGCACGGTGCCCAAGGTGACTCTCCTGGCTGCCCTCGTCATCGGCTCCTGCGTCACTTGCACGGATCCGATTCTT
TCGCAGGCAATAGCCAAGGGTCCCTTTGCCGACAAGTTCGTCCCCCGACATCTACGGGAGATCATCTCGTCCGAA
GCCGGCGCCAACGATGGGTTCGGCTTCCCCTTTCTCATGCTCGCCGTCTTTCTCATCCGTCACGCCGACTTAAAG
TCCGAGGGCGCCGTCGAAGCCGCTGGAGGGGCCGTGCGTATGCTGTTTGCTCGCGAGGAGGAGGTCGGCCGGCTT
GGGGGAGGCGTTGGTGTCGCTATCAGGAATTGGTTCCTTGAGACTTGGCTCTACACTGTCCTGTTGTCCGTACTT
TACGGCGCTGTCGTCGGATACGGTTCGTGCTGGGCGATCAAGCATGCTCTGCGAAAGAAGTGGATCGACACAGAG
TCCTATTTGCTCTTCCCCTCTGCCCTCGGAATGTTCATCGTCGGAACCTGCGGCGCCATCGGGACCGATGACCTC
CTGGCCTGCTTCGTCGCCGGCAACGCCCTAAACTGGGACGGCGAGTATCTTGCTGAGACGGAGCGACGACATGAC
GAGGTCAACTCTTGCATCGACGTACTTCTAAACTTTGGCGGCTTCATGTTCATCGGAAGCATCATGCCCTGGTCC
GCATTCAACGATCCGAACGGCACGGGCCTCACCGTTGGCCGGCTGATCGGCCTCGGTCTCCTGGTGCTGCTCTTC
CGACGCATCCCTGCCATATTCATCTCGTACAAGTTGATGCCATCGGTGGTTAAGAACTACAAAGAGGCGCTTTTC
ATGGGTTACTTTGGGCCTATTGGCGCCGGAGCCGTCTTTTACGTCGAGCACACCCGTCACCTGTTCCCGGAGGCT
GGAAAGGGCGATACCGAAGAGAACGACCTTACCAAGGTCATGATTCCTGTCGTCTACTGGCTCGTCTTCTTCTCC
ATCATCTTCCACGGCCTCTCTATCCCCGCCCTCGACGCCATCTACCGGTACATGGGCGTCAAGCCGATCCAGGAG
GATTCCGCCGAGATCCGTCGCAGGTCTTCGCGCGTGGCTACGCCCCCCAACGCCGTGCCGGGAAGCAGGGACACA
TTCATCGCCTATAACCGCTTCAGCAGGCCCGTCTCCGAGTCCCTCAGCCTTCCGATGTCGAGGAACCAGGCACCT
CCTTTCGATGATTATAGCGGCTTTTCAAAGTCCTCACAGGGCAGCTTGCCCTTTGAGCAGATCGAGCAGGCGCCG
AGTCGGAGAATACAGCCCCCGACCACTTACATC
Transcript >Ophio5|2860
ATGGTGACCTTGGACGTCTCCGAGCTCAACATTGTGCTCTCAGTGCTGGGCACCTTTATCGTGTGCTATGGCATC
ATCTCTGTCAAGATCAAGCAGAAATGGTATCTCGGTGAAGCCCTGCCCGCCATGATGATTGGCATCATCCTCGGT
CCTGTAGCTACCAGATTTATCGACAGCGAAAGGTGGGCGTCAGCGGAAAAGGGGCAGACTGCGGCGATTGCACTG
GGTGTGACAAGAGTCATGATAGGCCTTCAGCTGGTCATTGCCGGCTATCAGCTCCCAGCAAAGTACAACCTCACT
CGGTGGAAAGAAATGGCCATGTGTCTGCTCCCCATCATGACCATCATGTGGCTCTGCACCACACTATGCATCCTG
GGCACGGTGCCCAAGGTGACTCTCCTGGCTGCCCTCGTCATCGGCTCCTGCGTCACTTGCACGGATCCGATTCTT
TCGCAGGCAATAGCCAAGGGTCCCTTTGCCGACAAGTTCGTCCCCCGACATCTACGGGAGATCATCTCGTCCGAA
GCCGGCGCCAACGATGGGTTCGGCTTCCCCTTTCTCATGCTCGCCGTCTTTCTCATCCGTCACGCCGACTTAAAG
TCCGAGGGCGCCGTCGAAGCCGCTGGAGGGGCCGTGCGTATGCTGTTTGCTCGCGAGGAGGAGGTCGGCCGGCTT
GGGGGAGGCGTTGGTGTCGCTATCAGGAATTGGTTCCTTGAGACTTGGCTCTACACTGTCCTGTTGTCCGTACTT
TACGGCGCTGTCGTCGGATACGGTTCGTGCTGGGCGATCAAGCATGCTCTGCGAAAGAAGTGGATCGACACAGAG
TCCTATTTGCTCTTCCCCTCTGCCCTCGGAATGTTCATCGTCGGAACCTGCGGCGCCATCGGGACCGATGACCTC
CTGGCCTGCTTCGTCGCCGGCAACGCCCTAAACTGGGACGGCGAGTATCTTGCTGAGACGGAGCGACGACATGAC
GAGGTCAACTCTTGCATCGACGTACTTCTAAACTTTGGCGGCTTCATGTTCATCGGAAGCATCATGCCCTGGTCC
GCATTCAACGATCCGAACGGCACGGGCCTCACCGTTGGCCGGCTGATCGGCCTCGGTCTCCTGGTGCTGCTCTTC
CGACGCATCCCTGCCATATTCATCTCGTACAAGTTGATGCCATCGGTGGTTAAGAACTACAAAGAGGCGCTTTTC
ATGGGTTACTTTGGGCCTATTGGCGCCGGAGCCGTCTTTTACGTCGAGCACACCCGTCACCTGTTCCCGGAGGCT
GGAAAGGGCGATACCGAAGAGAACGACCTTACCAAGGTCATGATTCCTGTCGTCTACTGGCTCGTCTTCTTCTCC
ATCATCTTCCACGGCCTCTCTATCCCCGCCCTCGACGCCATCTACCGGTACATGGGCGTCAAGCCGATCCAGGAG
GATTCCGCCGAGATCCGTCGCAGGTCTTCGCGCGTGGCTACGCCCCCCAACGCCGTGCCGGGAAGCAGGGACACA
TTCATCGCCTATAACCGCTTCAGCAGGCCCGTCTCCGAGTCCCTCAGCCTTCCGATGTCGAGGAACCAGGCACCT
CCTTTCGATGATTATAGCGGCTTTTCAAAGTCCTCACAGGGCAGCTTGCCCTTTGAGCAGATCGAGCAGGCGCCG
AGTCGGAGAATACAGCCCCCGACCACTTACATCTAG
Gene >Ophio5|2860
ATGGTGACCTTGGACGTCTCCGAGCTCAACATTGTGCTCTCAGTGCTGGGTGAGTCTTGGGCTCGACGTGGCCTT
CTTGCTTCGACGGGAGGACTGAAGCTGATGATTGCACCTGCCTAGGCACCTTTATCGTGTGCTATGGCATCATCT
CTGTCAAGATCAAGCAGAAATGGTATCTCGGTGAAGCCCGTAAGTGGCTTCCCTCCTTTTGGCAACTGGCCACGC
GGATGGCTTCCGGAAGTCCTGACAATACAAAAAGTGCCCGCCATGATGATTGGCATCATCCTCGGTCCTGTAGCT
ACCAGATTTATCGACAGCGAAAGGTGGGCGTCAGCGGAAAAGGGGCAGACTGCGGCGATTGCACTGGTACGACGA
CCCCTCCTCCTCCTCCCCTCGACACTGCCTTCATCCCCCACAATTCTCTTGCTGACGGGGCTCCCGGCCGTCAAA
GGGTGTGACAAGAGTCATGATAGGCCTTCAGCTGGTCATTGCCGGCTATCAGCTCCCAGCAAAGTACAACCTCAC
TCGGTGGAAAGAAATGGCCATGTGTCTGCTCCCCATCATGACCATCATGTGGCTCTGCACCACACTATGCATCCT
GGGCACGGTGCCCAAGGTGACTCTCCTGGCTGCCCTCGTCATCGGCTCCTGCGTCACTTGCACGGATCCGATTCT
TTCGCAGGCAATAGCCAAGGGTCCCTTTGCCGACAAGTTCGTCCCCCGACATCTACGGGAGATCATCTCGTCCGA
AGCCGGCGCCAACGATGGGTTCGGCTTCCCCTTTCTCATGCTCGCCGTCTTTCTCATCCGTCACGCCGACTTAAA
GTCCGAGGGCGCCGTCGAAGCCGCTGGAGGGGCCGTGCGTATGCTGTTTGCTCGCGAGGAGGAGGTCGGCCGGCT
TGGGGGAGGCGTTGGTGTCGCTATCAGGAATTGGTTCCTTGAGACTTGGCTCTACACTGTCCTGTTGTCCGTACT
TTACGGCGCTGTCGTCGGATACGGTTCGTGCTGGGCGATCAAGCATGCTCTGCGAAAGTGAGTTCAGATAACGGT
CCCTCCCCTTTCCCCCCCAATTTGCCCTCCTCTGACACGTCCCCCTTTTTTCCAGGAAGTGGATCGACACAGAGT
CCTATTTGCTCTTCCCCTCTGCCCTCGGAATGTTCATCGTCGGAACCTGCGGCGCCATCGGGACCGATGACCTCC
TGGCCTGCTTCGTCGCCGGCAACGCCCTAAACTGGGACGGCGAGTATCTTGCTGAGACGGAGCGACGACATGACG
AGGTCAACTCTTGCATCGACGTACTTCTAAACTTTGGCGGCTTCATGTTCATCGGAAGCATCATGCCCTGGTCCG
CATTCAACGATCCGAACGGCACGGGCCTCACCGTTGGCCGGCTGATCGGCCTCGGTCTCCTGGTGCTGCTCTTCC
GACGCATCCCTGCCATATTCATCTCGTACAAGTTGATGCCATCGGTGGTTAAGAACTACAAAGAGGCGCTTTTCA
TGGGTTACTTTGGGCCTATTGGCGCCGGAGCCGTCTTTTACGTCGAGCACACCCGTCACCTGTTCCCGGAGGCTG
GAAAGGGCGATACCGAAGAGAACGACCTTACCAAGGTCATGATTCCTGTCGTCTACTGGCTCGTCTTCTTCTCCA
TCATCTTCCACGGCCTCTCTATCCCCGCCCTCGACGCCATCTACCGGTACATGGGCGTCAAGCCGATCCAGGAGG
ATTCCGCCGAGATCCGTCGCAGGTCTTCGCGCGTGGCTACGCCCCCCAACGCCGTGCCGGGAAGCAGGGACACAT
TCATCGCCTATAACCGCTTCAGCAGGCCCGTCTCCGAGTCCCTCAGCCTTCCGATGTCGAGGAACCAGGCACCTC
CTTTCGATGATTATAGCGGCTTTTCAAAGTCCTCACAGGGCAGCTTGCCCTTTGAGCAGATCGAGCAGGCGCCGA
GTCGGAGAATACAGCCCCCGACCACTTACATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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