Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2858
Gene name
Locationscaffold_23:1506..3119
Strand-
Gene length (bp)1613
Transcript length (bp)1497
Coding sequence length (bp)1494
Protein length (aa) 498

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.5

Transmembrane Domains

Domain # Start End Length
1 59 81 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2858
MPLDIPLLLRRQQNMSSPPFISPTTSSTGKGLPDHPEIIHNHYYTTRPNIVPWYRRKRFIWTAAAVIVFFVVASA
VTLGVVLKLEVGKGRFRSSGNTPSPSTLVSQVVSTSQSTAPTPTSGKPPDALTSATGALSSQTKPSSSSTLKSVT
AAETPLVIFTVSEKSRLASVYLENEQEKLHRRLLVWQDDNSDLIVTEWSVDNKSRYRLRDKLSSTMPDAKLGSPL
AMTASSSGAVHLFFLDTQNAVSHVFQPAAGVWERSALSKSNGPVVASGPSPLSTAWHRTKDGIEVLGLAYANSQE
LRLVMTDGPTADSPWLAVKVTSLPGPVPGQSEEPCFALAGDWRNAYGARTMLLAILVEDGLFAFECQIETWPPGS
TTPCRKINDTFQDEKSRDVAFAPPPKQLDWIRLDSGHSAPYDFSLVSLGEDGFVSENRIGANVARKTERGLDTKM
AVRAISATDEAVLFAASSDDIYAYRLDEDSGSWRAEGPLLVQARDRLE
Coding >Ophio5|2858
ATGCCTCTTGACATCCCCTTGCTTCTGCGCAGACAGCAAAACATGTCGAGCCCACCATTTATTTCGCCCACGACG
TCGTCAACTGGCAAAGGCCTGCCGGACCATCCCGAAATCATCCACAACCACTATTACACGACAAGGCCCAATATT
GTGCCCTGGTACCGTCGCAAGCGCTTCATTTGGACTGCCGCCGCCGTGATCGTCTTTTTCGTCGTCGCTTCCGCC
GTCACTCTTGGTGTGGTTCTCAAACTCGAGGTCGGAAAGGGCCGGTTTCGCAGTTCCGGGAATACACCGTCTCCG
TCTACCCTTGTGAGCCAAGTAGTGAGCACGAGCCAATCGACAGCGCCTACTCCGACATCTGGGAAACCCCCCGAT
GCTCTGACATCAGCGACTGGCGCTTTGTCCTCTCAGACAAAACCCTCATCATCGTCAACTCTAAAGAGCGTAACG
GCAGCCGAGACTCCGTTGGTGATTTTCACCGTTTCCGAGAAATCGCGACTGGCATCGGTGTATCTTGAAAACGAG
CAAGAAAAGCTGCATCGTCGGTTGCTGGTCTGGCAAGATGACAACAGTGACCTCATCGTGACGGAGTGGTCGGTT
GACAACAAATCCCGTTACCGACTCCGCGACAAGCTTTCGTCCACAATGCCTGACGCCAAGCTCGGCTCACCACTC
GCCATGACGGCCAGTAGCTCTGGCGCCGTTCACCTCTTCTTTCTGGACACGCAAAATGCAGTCTCCCACGTCTTT
CAGCCTGCCGCTGGCGTCTGGGAGAGGAGTGCGCTCAGCAAAAGTAACGGCCCAGTGGTTGCTTCCGGTCCCTCG
CCCCTATCGACTGCGTGGCATCGAACCAAAGACGGGATAGAGGTTCTTGGCCTCGCGTACGCAAACTCCCAAGAG
CTGCGCCTGGTGATGACGGATGGTCCCACCGCGGATAGCCCTTGGCTGGCTGTCAAGGTGACGTCTTTGCCGGGG
CCCGTTCCTGGTCAGTCGGAAGAGCCTTGCTTCGCACTCGCAGGAGACTGGCGGAATGCGTATGGAGCTCGCACA
ATGCTGCTGGCAATACTGGTGGAAGACGGCCTTTTTGCATTCGAGTGTCAGATTGAGACTTGGCCGCCAGGTTCA
ACCACGCCGTGCCGTAAAATCAACGACACGTTCCAAGACGAAAAGAGTCGAGACGTTGCTTTCGCCCCGCCCCCG
AAGCAGCTCGATTGGATTCGCCTTGATAGTGGGCATAGCGCTCCTTACGACTTCAGTCTCGTTAGCCTGGGCGAG
GACGGCTTCGTTAGCGAAAACAGGATCGGTGCTAACGTAGCAAGGAAAACAGAGCGCGGATTAGACACTAAGATG
GCAGTGCGGGCGATTTCGGCGACGGACGAGGCTGTGTTGTTTGCGGCTTCGAGCGACGATATTTATGCGTACCGA
TTGGACGAGGATAGTGGGAGTTGGCGGGCAGAGGGCCCGTTACTTGTACAGGCTCGGGACAGGTTAGAA
Transcript >Ophio5|2858
ATGCCTCTTGACATCCCCTTGCTTCTGCGCAGACAGCAAAACATGTCGAGCCCACCATTTATTTCGCCCACGACG
TCGTCAACTGGCAAAGGCCTGCCGGACCATCCCGAAATCATCCACAACCACTATTACACGACAAGGCCCAATATT
GTGCCCTGGTACCGTCGCAAGCGCTTCATTTGGACTGCCGCCGCCGTGATCGTCTTTTTCGTCGTCGCTTCCGCC
GTCACTCTTGGTGTGGTTCTCAAACTCGAGGTCGGAAAGGGCCGGTTTCGCAGTTCCGGGAATACACCGTCTCCG
TCTACCCTTGTGAGCCAAGTAGTGAGCACGAGCCAATCGACAGCGCCTACTCCGACATCTGGGAAACCCCCCGAT
GCTCTGACATCAGCGACTGGCGCTTTGTCCTCTCAGACAAAACCCTCATCATCGTCAACTCTAAAGAGCGTAACG
GCAGCCGAGACTCCGTTGGTGATTTTCACCGTTTCCGAGAAATCGCGACTGGCATCGGTGTATCTTGAAAACGAG
CAAGAAAAGCTGCATCGTCGGTTGCTGGTCTGGCAAGATGACAACAGTGACCTCATCGTGACGGAGTGGTCGGTT
GACAACAAATCCCGTTACCGACTCCGCGACAAGCTTTCGTCCACAATGCCTGACGCCAAGCTCGGCTCACCACTC
GCCATGACGGCCAGTAGCTCTGGCGCCGTTCACCTCTTCTTTCTGGACACGCAAAATGCAGTCTCCCACGTCTTT
CAGCCTGCCGCTGGCGTCTGGGAGAGGAGTGCGCTCAGCAAAAGTAACGGCCCAGTGGTTGCTTCCGGTCCCTCG
CCCCTATCGACTGCGTGGCATCGAACCAAAGACGGGATAGAGGTTCTTGGCCTCGCGTACGCAAACTCCCAAGAG
CTGCGCCTGGTGATGACGGATGGTCCCACCGCGGATAGCCCTTGGCTGGCTGTCAAGGTGACGTCTTTGCCGGGG
CCCGTTCCTGGTCAGTCGGAAGAGCCTTGCTTCGCACTCGCAGGAGACTGGCGGAATGCGTATGGAGCTCGCACA
ATGCTGCTGGCAATACTGGTGGAAGACGGCCTTTTTGCATTCGAGTGTCAGATTGAGACTTGGCCGCCAGGTTCA
ACCACGCCGTGCCGTAAAATCAACGACACGTTCCAAGACGAAAAGAGTCGAGACGTTGCTTTCGCCCCGCCCCCG
AAGCAGCTCGATTGGATTCGCCTTGATAGTGGGCATAGCGCTCCTTACGACTTCAGTCTCGTTAGCCTGGGCGAG
GACGGCTTCGTTAGCGAAAACAGGATCGGTGCTAACGTAGCAAGGAAAACAGAGCGCGGATTAGACACTAAGATG
GCAGTGCGGGCGATTTCGGCGACGGACGAGGCTGTGTTGTTTGCGGCTTCGAGCGACGATATTTATGCGTACCGA
TTGGACGAGGATAGTGGGAGTTGGCGGGCAGAGGGCCCGTTACTTGTACAGGCTCGGGACAGGTTAGAATAG
Gene >Ophio5|2858
ATGCCTCTTGACATCCCCTTGCTTCTGCGCAGACAGCAAAACATGTCGAGCCCACCATTTATTTCGCCCACGACG
TCGTCAACTGGCAAAGGCCTGCCGGACCATCCCGAAATCATCCACAACCACTATTACACGACAAGGCCCAATATT
GTGCCCTGGTACCGTCGCAAGCGCTTCATTTGGACTGCCGCCGCCGTGATCGTCTTTTTCGTCGTCGCTTCCGCC
GTCACTCTTGGTGTGGTTCTCAAACTCGAGGTCGGAAAGGGCCGGTTTCGCAGTTCCGGGGTGAGCATTGACCAT
CAGACCAGTTTTTCTCGACCTCTGACCGACCAGAATACACCGTCTCCGTCTACCCTTGTGAGCCAAGTAGTGAGC
ACGAGCCAATCGACAGCGCCTACTCCGACATCTGGGAAACCCCCCGATGCTCTGACATCAGCGACTGGCGCTTTG
TCCTCTCAGACAAAACCCTCATCATCGTCAACTCTAAAGAGCGTAACGGCAGCCGAGACTCCGTTGGTGATTTTC
ACCGTTTCCGAGAAATCGCGACTGGCATCGGTGTATCTTGAAAACGAGCAAGAAAAGCTGCATCGTCGGTTGCTG
GTCTGGCAAGATGACAACAGTGACCTCATCGTGACGGAGTGGTCGGTTGACAACAAATCCCGTTACCGACTCCGC
GACAAGCTTTCGTCCACAATGCCTGACGCCAAGCTCGGCTCACCACTCGCCATGACGGCCAGTAGCTCTGGCGCC
GTTCACCTCTTCTTTCTGGACACGCAAAATGCAGTCTCCCACGTCTTTCAGCCTGCCGCTGGCGTCTGGGAGAGG
AGTGCGCTCAGCAAAAGTAACGGCCCAGTGGTTGCTTCCGGTCCCTCGCCCCTATCGACTGCGTGGCATCGAACC
AAAGACGGGATAGAGGTTCTTGGCCTCGCGTACGCAAACTCCCAAGAGCTGCGCCTGGTGATGACGGATGGTCCC
ACCGCGGATAGCCCTTGGCTGGCTGTCAAGGTGACGTCTTTGCCGGGGCCCGTTCCTGGTCAGTCGGAAGAGCCT
TGCTTCGCACTCGCAGGAGACTGGCGGAATGCGTATGGAGCTCGCACAATGCTGCTGGCAATACTGGTGGAAGAC
GGCCTTTTTGCATTCGAGTGTCAGATTGAGACTTGGCCGCCAGGTTCAACCACGCCGTGCCGTAAAATCAACGAC
ACGTTCCAAGGTAATTATCCCCCCCCCCCTTCCTTTTCTTCCGTCGAGTAGGCATGGAGGCACTAACAAGGCTTA
TAGACGAAAAGAGTCGAGACGTTGCTTTCGCCCCGCCCCCGAAGCAGCTCGATTGGATTCGCCTTGATAGTGGGC
ATAGCGCTCCTTACGACTTCAGTCTCGTTAGCCTGGGCGAGGACGGCTTCGTTAGCGAAAACAGGATCGGTGCTA
ACGTAGCAAGGAAAACAGAGCGCGGATTAGACACTAAGATGGCAGTGCGGGCGATTTCGGCGACGGACGAGGCTG
TGTTGTTTGCGGCTTCGAGCGACGATATTTATGCGTACCGATTGGACGAGGATAGTGGGAGTTGGCGGGCAGAGG
GCCCGTTACTTGTACAGGCTCGGGACAGGTTAGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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