Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|2831
Gene name
Location	scaffold_227:27800..29245
Strand	+
Gene length (bp)	1445
Transcript length (bp)	1278
Coding sequence length (bp)	1275
Protein length (aa)	425

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12697	Abhydrolase_6	Alpha/beta hydrolase family	3.1E-11	58	364

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q12405\|LPX1_YEAST	Peroxisomal membrane protein LPX1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LPX1 PE=1 SV=1	55	175	2.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|2831 MLQTVHFSVKEHIVPGCHIREYPGISSGRQEEYMYLHVKQYTPLDQAPRLEDSAMTLIAMHGIGLPKELYEPLWD ELYDQSRTHGYSIRGIWIADMAHMGTSSMINEKNMSMDSSWMDHARDVLHMINHFRNEMPRPLIGLGHSCGGLQL VNLAYIHPRLFTSLLLLDPAFFLTKTGKDIIKGGGLRETMYGKDLWKTRTDAASFIEKAYPSWDQGVKRLMVKYG FRDLPTALYPELPPDADPANPPVTLMTTKHQMALTLSRPCFDCKQVDGRIVVDRETHADLDPERVTMPGYRPEVF PSMERIQTLRPSALFLLGKHTNTPWLDGMRRAADVAGTGVGGSGGKPEGRTREVLIRGGHYFPFTALEETSLACG TWLGEEMAKYRDRERRWKNERSKLSERDHLVLPAKWKEFIRPPDVISSKL
Coding	>Ophio5\|2831 ATGCTTCAGACGGTTCACTTCAGCGTCAAGGAGCACATTGTGCCCGGCTGTCATATCCGCGAGTACCCCGGCATC AGCTCAGGCAGACAAGAAGAATACATGTATCTGCATGTGAAGCAATACACGCCACTTGATCAGGCGCCGAGGCTG GAAGATAGCGCCATGACACTGATAGCCATGCACGGCATCGGCCTCCCCAAGGAGTTGTACGAGCCACTTTGGGAT GAGCTATACGATCAATCGAGGACGCACGGCTATTCAATACGCGGCATCTGGATAGCAGACATGGCCCATATGGGT ACAAGCAGTATGATCAACGAGAAGAACATGAGCATGGACAGTTCCTGGATGGATCACGCTCGCGATGTGTTACAC ATGATTAACCATTTCCGCAACGAGATGCCACGGCCACTGATAGGACTTGGCCACAGCTGTGGCGGTCTCCAATTA GTCAATCTGGCGTATATCCACCCAAGGCTTTTCACCTCTTTACTATTACTAGACCCGGCATTCTTCCTAACCAAA ACTGGCAAAGACATAATCAAGGGCGGGGGCTTAAGGGAGACTATGTACGGTAAAGATCTCTGGAAGACTCGCACC GACGCCGCGTCTTTTATAGAGAAGGCTTATCCGAGCTGGGATCAAGGCGTCAAACGTCTCATGGTCAAGTACGGC TTTCGCGACTTGCCTACAGCGCTGTACCCCGAGCTGCCGCCCGACGCGGACCCGGCAAACCCGCCCGTGACGTTG ATGACGACTAAGCATCAGATGGCACTGACACTTTCAAGGCCGTGCTTCGATTGCAAGCAGGTCGATGGCCGAATC GTGGTCGACCGCGAAACTCACGCCGACCTGGACCCGGAACGAGTCACGATGCCCGGCTATCGTCCGGAAGTCTTC CCCTCGATGGAGAGAATACAGACACTGCGCCCTTCTGCGCTCTTCCTCCTGGGGAAGCATACCAATACGCCGTGG TTGGATGGTATGCGCAGGGCCGCCGACGTGGCAGGCACAGGTGTAGGAGGATCTGGGGGAAAGCCGGAGGGGAGG ACCAGAGAGGTCTTGATCCGAGGCGGCCATTACTTTCCCTTTACCGCCTTGGAGGAGACGAGCTTGGCGTGCGGC ACTTGGCTCGGAGAGGAAATGGCCAAGTACAGAGACCGAGAAAGGAGATGGAAGAATGAAAGGAGTAAGTTGTCG GAGAGGGATCACTTGGTCTTGCCGGCCAAGTGGAAAGAGTTCATCCGGCCACCGGATGTTATCAGCAGCAAGTTG
Transcript	>Ophio5\|2831 ATGCTTCAGACGGTTCACTTCAGCGTCAAGGAGCACATTGTGCCCGGCTGTCATATCCGCGAGTACCCCGGCATC AGCTCAGGCAGACAAGAAGAATACATGTATCTGCATGTGAAGCAATACACGCCACTTGATCAGGCGCCGAGGCTG GAAGATAGCGCCATGACACTGATAGCCATGCACGGCATCGGCCTCCCCAAGGAGTTGTACGAGCCACTTTGGGAT GAGCTATACGATCAATCGAGGACGCACGGCTATTCAATACGCGGCATCTGGATAGCAGACATGGCCCATATGGGT ACAAGCAGTATGATCAACGAGAAGAACATGAGCATGGACAGTTCCTGGATGGATCACGCTCGCGATGTGTTACAC ATGATTAACCATTTCCGCAACGAGATGCCACGGCCACTGATAGGACTTGGCCACAGCTGTGGCGGTCTCCAATTA GTCAATCTGGCGTATATCCACCCAAGGCTTTTCACCTCTTTACTATTACTAGACCCGGCATTCTTCCTAACCAAA ACTGGCAAAGACATAATCAAGGGCGGGGGCTTAAGGGAGACTATGTACGGTAAAGATCTCTGGAAGACTCGCACC GACGCCGCGTCTTTTATAGAGAAGGCTTATCCGAGCTGGGATCAAGGCGTCAAACGTCTCATGGTCAAGTACGGC TTTCGCGACTTGCCTACAGCGCTGTACCCCGAGCTGCCGCCCGACGCGGACCCGGCAAACCCGCCCGTGACGTTG ATGACGACTAAGCATCAGATGGCACTGACACTTTCAAGGCCGTGCTTCGATTGCAAGCAGGTCGATGGCCGAATC GTGGTCGACCGCGAAACTCACGCCGACCTGGACCCGGAACGAGTCACGATGCCCGGCTATCGTCCGGAAGTCTTC CCCTCGATGGAGAGAATACAGACACTGCGCCCTTCTGCGCTCTTCCTCCTGGGGAAGCATACCAATACGCCGTGG TTGGATGGTATGCGCAGGGCCGCCGACGTGGCAGGCACAGGTGTAGGAGGATCTGGGGGAAAGCCGGAGGGGAGG ACCAGAGAGGTCTTGATCCGAGGCGGCCATTACTTTCCCTTTACCGCCTTGGAGGAGACGAGCTTGGCGTGCGGC ACTTGGCTCGGAGAGGAAATGGCCAAGTACAGAGACCGAGAAAGGAGATGGAAGAATGAAAGGAGTAAGTTGTCG GAGAGGGATCACTTGGTCTTGCCGGCCAAGTGGAAAGAGTTCATCCGGCCACCGGATGTTATCAGCAGCAAGTTG TAG
Gene	>Ophio5\|2831 ATGCTTCAGACGGTTCACTTCAGCGTCAAGGAGCACATTGTGCCCGGCTGTCATATCCGCGAGTACCCCGGCATC AGCTCAGGCAGACAAGAAGAATACATGTATCTGCATGTGAAGCAATACACGCCACTTGATCAGGCGCCGAGGCTG GAAGATAGCGCCATGACACTGATAGCCATGCACGGCATCGGCCTCCCCAAGGTCTGGGGCCCCAAGGATGCAGCC GCTGGCTGACCAGCTGGATGCTGACCCCGGGCTTCAGGAGTTGTACGAGCCACTTTGGGATGAGCTATACGATCA ATCGAGGACGCACGGCTATTCAATACGCGGCATCTGGATAGCAGACATGGCCCATATGGGTACAAGCAGTATGAT CAACGAGAAGAACATGAGCATGGACAGTGCGTTCGTTTCATGTCTGGTTCAAGGCCGATCTCTAACAGCAATAGG TTCCTGGATGGATCACGCTCGCGATGTGTTACACATGATTAACCATTTCCGCAACGAGATGCCACGGCCACTGAT AGGACTTGGCCACAGCTGTGGCGGTCTCCAATTGTAAAGGCTTGCCTAGCGAACTGCCACGAAATTCAACCTACT GATGACCATTCTGCAGAGTCAATCTGGCGTATATCCACCCAAGGCTTTTCACCTCTTTACTATTACTAGACCCGG CATTCTTCCTAACCAAAACTGGCAAAGACATAATCAAGGGCGGGGGCTTAAGGGAGACTATGTACGGTAAAGATC TCTGGAAGACTCGCACCGACGCCGCGTCTTTTATAGAGAAGGCTTATCCGAGCTGGGATCAAGGCGTCAAACGTC TCATGGTCAAGTACGGCTTTCGCGACTTGCCTACAGCGCTGTACCCCGAGCTGCCGCCCGACGCGGACCCGGCAA ACCCGCCCGTGACGTTGATGACGACTAAGCATCAGATGGCACTGACACTTTCAAGGCCGTGCTTCGATTGCAAGC AGGTCGATGGCCGAATCGTGGTCGACCGCGAAACTCACGCCGACCTGGACCCGGAACGAGTCACGATGCCCGGCT ATCGTCCGGAAGTCTTCCCCTCGATGGAGAGAATACAGACACTGCGCCCTTCTGCGCTCTTCCTCCTGGGGAAGC ATACCAATACGCCGTGGTTGGATGGTATGCGCAGGGCCGCCGACGTGGCAGGCACAGGTGTAGGAGGATCTGGGG GAAAGCCGGAGGGGAGGACCAGAGAGGTCTTGATCCGAGGCGGCCATTACTTTCCCTTTACCGCCTTGGAGGAGA CGAGCTTGGCGTGCGGCACTTGGCTCGGAGAGGAAATGGCCAAGTACAGAGACCGAGAAAGGAGATGGAAGAATG AAAGGAGTAAGTTGTCGGAGAGGGATCACTTGGTCTTGCCGGCCAAGTGGAAAGAGTTCATCCGGCCACCGGATG TTATCAGCAGCAAGTTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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