Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2830
Gene name
Locationscaffold_227:24960..26796
Strand-
Gene length (bp)1836
Transcript length (bp)1836
Coding sequence length (bp)1833
Protein length (aa) 611

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03068 PAD Protein-arginine deiminase (PAD) 8.9E-121 198 605

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9ULW8|PADI3_HUMAN Protein-arginine deiminase type-3 OS=Homo sapiens GN=PADI3 PE=1 SV=2 199 605 3.0E-49
sp|P70708|PADI3_RAT Protein-arginine deiminase type-3 OS=Rattus norvegicus GN=Padi3 PE=2 SV=1 199 605 8.0E-48
sp|Q9Z184|PADI3_MOUSE Protein-arginine deiminase type-3 OS=Mus musculus GN=Padi3 PE=1 SV=2 199 605 3.0E-47
sp|O02849|PADI3_SHEEP Protein-arginine deiminase type-3 OS=Ovis aries GN=PADI3 PE=1 SV=1 28 606 7.0E-47
sp|Q9UM07|PADI4_HUMAN Protein-arginine deiminase type-4 OS=Homo sapiens GN=PADI4 PE=1 SV=2 200 605 3.0E-45
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9ULW8|PADI3_HUMAN Protein-arginine deiminase type-3 OS=Homo sapiens GN=PADI3 PE=1 SV=2 199 605 3.0E-49
sp|P70708|PADI3_RAT Protein-arginine deiminase type-3 OS=Rattus norvegicus GN=Padi3 PE=2 SV=1 199 605 8.0E-48
sp|Q9Z184|PADI3_MOUSE Protein-arginine deiminase type-3 OS=Mus musculus GN=Padi3 PE=1 SV=2 199 605 3.0E-47
sp|O02849|PADI3_SHEEP Protein-arginine deiminase type-3 OS=Ovis aries GN=PADI3 PE=1 SV=1 28 606 7.0E-47
sp|Q9UM07|PADI4_HUMAN Protein-arginine deiminase type-4 OS=Homo sapiens GN=PADI4 PE=1 SV=2 200 605 3.0E-45
sp|Q9ULC6|PADI1_HUMAN Protein-arginine deiminase type-1 OS=Homo sapiens GN=PADI1 PE=2 SV=2 199 605 8.0E-44
sp|O88807|PADI4_RAT Protein-arginine deiminase type-4 OS=Rattus norvegicus GN=Padi4 PE=2 SV=1 199 605 2.0E-43
sp|Q9Z183|PADI4_MOUSE Protein-arginine deiminase type-4 OS=Mus musculus GN=Padi4 PE=2 SV=3 199 605 3.0E-43
sp|O88806|PADI1_RAT Protein-arginine deiminase type-1 OS=Rattus norvegicus GN=Padi1 PE=2 SV=1 199 605 9.0E-41
sp|P20717|PADI2_RAT Protein-arginine deiminase type-2 OS=Rattus norvegicus GN=Padi2 PE=1 SV=1 199 605 1.0E-40
sp|Q9Y2J8|PADI2_HUMAN Protein-arginine deiminase type-2 OS=Homo sapiens GN=PADI2 PE=1 SV=2 199 605 4.0E-40
sp|Q08642|PADI2_MOUSE Protein-arginine deiminase type-2 OS=Mus musculus GN=Padi2 PE=1 SV=2 199 605 5.0E-40
sp|Q9Z185|PADI1_MOUSE Protein-arginine deiminase type-1 OS=Mus musculus GN=Padi1 PE=1 SV=1 199 605 1.0E-38
sp|Q6TGC4|PADI6_HUMAN Protein-arginine deiminase type-6 OS=Homo sapiens GN=PADI6 PE=1 SV=3 260 605 5.0E-30
sp|Q8K3V4|PADI6_MOUSE Protein-arginine deiminase type-6 OS=Mus musculus GN=Padi6 PE=1 SV=2 260 605 3.0E-27
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GO

GO Term Description Terminal node
GO:0004668 protein-arginine deiminase activity Yes
GO:0005509 calcium ion binding Yes
GO:0005737 cytoplasm Yes
GO:0016787 hydrolase activity No
GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines No
GO:0046872 metal ion binding No
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds No
GO:0005488 binding No
GO:0110165 cellular anatomical entity No
GO:0003824 catalytic activity No
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0043169 cation binding No
GO:0043167 ion binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2830
MATFLRLTFLTAIIHSIHAAILQPHIRADTNRDGIVDVDGSSDSYDKTSWTPERGAIFLANIGDKTLRCFTQDAN
GNPLSENELALCNDAAGHLLLAPEYAAPLRTLPIDVSADATARIYATARAATERVRIFVLDDVSKPASTSSWRLV
DPEFSFNSTQLKSGIFLGLDGREPVIDAEVWDGSVTVCFDVRDGAERVSDKVALKMAPVLTHHHLQTVETLISVS
TGDTDQRFISQLDEARAAAGLKSPLLLINGTDDIWAQDFIEPAYTSMPGPDGPISLRIILRSPQSSRSAGRKVFE
QFRGPGIGGIQPLSGIGSGFGKRHINSLGNLETIPPYTSKDGVEYKAGRTIMGKHFGDMPAKSILGFLHGQRLQP
PLLLETGWLLVGHVDEFVQFVPYENDLGFTIAIADTRSAVRLMQELEKDGHGGVLACTYPANDIDMADVSDAGIG
VTISDLASNQTFLDGNAYAQKYMDANLEMLLAEIPLSPEDVIRVPTLFRTIDYLYPMGTDGTPRWKDPPPKGEKQ
VAAFNPEAINGIVIGKHYVSPKTFGPVVDGVDVLARATEAAYARAGMTVHYVDDFKSHHLSTGEVHCGSNTLRQT
DLIWWARGMKQ
Coding >Ophio5|2830
ATGGCAACCTTTCTACGCCTCACGTTCTTGACAGCCATCATCCATTCCATCCACGCGGCAATTTTGCAACCTCAT
ATTCGCGCGGACACCAACAGGGATGGAATCGTCGACGTCGACGGTTCCTCGGACTCGTACGACAAGACATCCTGG
ACCCCAGAGCGTGGAGCCATCTTCCTAGCGAATATCGGTGACAAGACTCTACGTTGCTTCACCCAGGACGCGAAT
GGGAATCCCCTGAGCGAAAATGAATTGGCATTATGCAACGATGCGGCGGGTCATCTTCTCCTTGCTCCGGAATAC
GCGGCGCCCCTTCGAACACTCCCTATCGACGTGTCGGCCGATGCCACGGCTCGGATTTACGCTACAGCTCGAGCG
GCGACGGAACGCGTTCGAATCTTTGTCCTCGATGACGTTTCCAAGCCGGCATCGACTTCGTCCTGGCGTCTCGTC
GATCCCGAGTTCTCCTTCAACTCGACCCAACTCAAGTCTGGTATCTTTCTCGGCTTGGACGGTAGAGAGCCTGTG
ATAGACGCTGAAGTTTGGGACGGTTCTGTCACTGTGTGTTTTGACGTCAGGGATGGCGCAGAGCGTGTCTCGGAC
AAGGTAGCTCTGAAGATGGCGCCGGTGCTCACCCATCATCACCTCCAAACAGTCGAGACCTTGATCAGTGTCTCT
ACAGGGGACACTGACCAACGTTTCATCAGCCAATTGGACGAAGCCAGGGCTGCGGCCGGTCTCAAAAGCCCCCTA
CTGCTCATCAACGGAACAGACGATATCTGGGCCCAGGACTTTATAGAGCCGGCCTACACAAGCATGCCCGGGCCA
GACGGTCCCATCTCGCTCCGTATAATACTTCGCTCACCACAGTCTAGCCGATCAGCAGGACGCAAGGTATTTGAG
CAGTTTCGCGGCCCGGGCATCGGAGGAATCCAACCCCTTAGCGGAATCGGATCTGGATTTGGCAAGCGTCACATC
AACAGCCTCGGAAACCTCGAGACGATTCCTCCCTACACCTCAAAGGATGGCGTCGAGTACAAGGCTGGCCGCACC
ATCATGGGCAAGCACTTTGGTGATATGCCTGCAAAGTCGATACTCGGCTTTCTACACGGACAGCGTCTGCAGCCT
CCTTTGCTACTCGAGACCGGCTGGCTCCTCGTCGGCCACGTAGACGAGTTCGTTCAGTTCGTCCCCTACGAAAAC
GATCTAGGCTTCACCATTGCCATTGCAGATACCAGGTCGGCAGTGCGTCTTATGCAGGAACTAGAGAAAGACGGC
CACGGCGGCGTCCTTGCCTGCACCTACCCAGCCAACGACATCGACATGGCCGACGTCAGCGACGCGGGCATAGGC
GTAACCATATCAGACCTCGCGAGCAACCAGACATTTCTAGATGGCAACGCCTACGCGCAGAAATACATGGACGCG
AACCTGGAGATGCTACTGGCCGAAATCCCTCTCTCCCCAGAGGACGTTATTCGTGTGCCTACCCTCTTCCGCACC
ATCGACTACCTATACCCGATGGGCACCGACGGGACTCCGCGGTGGAAGGACCCGCCTCCCAAAGGCGAGAAGCAA
GTGGCGGCCTTCAACCCAGAGGCCATCAACGGCATCGTCATCGGCAAGCACTACGTGAGCCCCAAGACGTTTGGA
CCGGTTGTCGACGGGGTGGATGTGCTTGCGAGAGCGACCGAGGCGGCGTACGCAAGGGCCGGGATGACGGTTCAC
TATGTTGATGATTTCAAGAGTCATCATCTGTCCACTGGCGAGGTTCATTGTGGGAGTAATACGCTGCGGCAGACT
GACTTGATTTGGTGGGCAAGGGGGATGAAGCAG
Transcript >Ophio5|2830
ATGGCAACCTTTCTACGCCTCACGTTCTTGACAGCCATCATCCATTCCATCCACGCGGCAATTTTGCAACCTCAT
ATTCGCGCGGACACCAACAGGGATGGAATCGTCGACGTCGACGGTTCCTCGGACTCGTACGACAAGACATCCTGG
ACCCCAGAGCGTGGAGCCATCTTCCTAGCGAATATCGGTGACAAGACTCTACGTTGCTTCACCCAGGACGCGAAT
GGGAATCCCCTGAGCGAAAATGAATTGGCATTATGCAACGATGCGGCGGGTCATCTTCTCCTTGCTCCGGAATAC
GCGGCGCCCCTTCGAACACTCCCTATCGACGTGTCGGCCGATGCCACGGCTCGGATTTACGCTACAGCTCGAGCG
GCGACGGAACGCGTTCGAATCTTTGTCCTCGATGACGTTTCCAAGCCGGCATCGACTTCGTCCTGGCGTCTCGTC
GATCCCGAGTTCTCCTTCAACTCGACCCAACTCAAGTCTGGTATCTTTCTCGGCTTGGACGGTAGAGAGCCTGTG
ATAGACGCTGAAGTTTGGGACGGTTCTGTCACTGTGTGTTTTGACGTCAGGGATGGCGCAGAGCGTGTCTCGGAC
AAGGTAGCTCTGAAGATGGCGCCGGTGCTCACCCATCATCACCTCCAAACAGTCGAGACCTTGATCAGTGTCTCT
ACAGGGGACACTGACCAACGTTTCATCAGCCAATTGGACGAAGCCAGGGCTGCGGCCGGTCTCAAAAGCCCCCTA
CTGCTCATCAACGGAACAGACGATATCTGGGCCCAGGACTTTATAGAGCCGGCCTACACAAGCATGCCCGGGCCA
GACGGTCCCATCTCGCTCCGTATAATACTTCGCTCACCACAGTCTAGCCGATCAGCAGGACGCAAGGTATTTGAG
CAGTTTCGCGGCCCGGGCATCGGAGGAATCCAACCCCTTAGCGGAATCGGATCTGGATTTGGCAAGCGTCACATC
AACAGCCTCGGAAACCTCGAGACGATTCCTCCCTACACCTCAAAGGATGGCGTCGAGTACAAGGCTGGCCGCACC
ATCATGGGCAAGCACTTTGGTGATATGCCTGCAAAGTCGATACTCGGCTTTCTACACGGACAGCGTCTGCAGCCT
CCTTTGCTACTCGAGACCGGCTGGCTCCTCGTCGGCCACGTAGACGAGTTCGTTCAGTTCGTCCCCTACGAAAAC
GATCTAGGCTTCACCATTGCCATTGCAGATACCAGGTCGGCAGTGCGTCTTATGCAGGAACTAGAGAAAGACGGC
CACGGCGGCGTCCTTGCCTGCACCTACCCAGCCAACGACATCGACATGGCCGACGTCAGCGACGCGGGCATAGGC
GTAACCATATCAGACCTCGCGAGCAACCAGACATTTCTAGATGGCAACGCCTACGCGCAGAAATACATGGACGCG
AACCTGGAGATGCTACTGGCCGAAATCCCTCTCTCCCCAGAGGACGTTATTCGTGTGCCTACCCTCTTCCGCACC
ATCGACTACCTATACCCGATGGGCACCGACGGGACTCCGCGGTGGAAGGACCCGCCTCCCAAAGGCGAGAAGCAA
GTGGCGGCCTTCAACCCAGAGGCCATCAACGGCATCGTCATCGGCAAGCACTACGTGAGCCCCAAGACGTTTGGA
CCGGTTGTCGACGGGGTGGATGTGCTTGCGAGAGCGACCGAGGCGGCGTACGCAAGGGCCGGGATGACGGTTCAC
TATGTTGATGATTTCAAGAGTCATCATCTGTCCACTGGCGAGGTTCATTGTGGGAGTAATACGCTGCGGCAGACT
GACTTGATTTGGTGGGCAAGGGGGATGAAGCAGTAG
Gene >Ophio5|2830
ATGGCAACCTTTCTACGCCTCACGTTCTTGACAGCCATCATCCATTCCATCCACGCGGCAATTTTGCAACCTCAT
ATTCGCGCGGACACCAACAGGGATGGAATCGTCGACGTCGACGGTTCCTCGGACTCGTACGACAAGACATCCTGG
ACCCCAGAGCGTGGAGCCATCTTCCTAGCGAATATCGGTGACAAGACTCTACGTTGCTTCACCCAGGACGCGAAT
GGGAATCCCCTGAGCGAAAATGAATTGGCATTATGCAACGATGCGGCGGGTCATCTTCTCCTTGCTCCGGAATAC
GCGGCGCCCCTTCGAACACTCCCTATCGACGTGTCGGCCGATGCCACGGCTCGGATTTACGCTACAGCTCGAGCG
GCGACGGAACGCGTTCGAATCTTTGTCCTCGATGACGTTTCCAAGCCGGCATCGACTTCGTCCTGGCGTCTCGTC
GATCCCGAGTTCTCCTTCAACTCGACCCAACTCAAGTCTGGTATCTTTCTCGGCTTGGACGGTAGAGAGCCTGTG
ATAGACGCTGAAGTTTGGGACGGTTCTGTCACTGTGTGTTTTGACGTCAGGGATGGCGCAGAGCGTGTCTCGGAC
AAGGTAGCTCTGAAGATGGCGCCGGTGCTCACCCATCATCACCTCCAAACAGTCGAGACCTTGATCAGTGTCTCT
ACAGGGGACACTGACCAACGTTTCATCAGCCAATTGGACGAAGCCAGGGCTGCGGCCGGTCTCAAAAGCCCCCTA
CTGCTCATCAACGGAACAGACGATATCTGGGCCCAGGACTTTATAGAGCCGGCCTACACAAGCATGCCCGGGCCA
GACGGTCCCATCTCGCTCCGTATAATACTTCGCTCACCACAGTCTAGCCGATCAGCAGGACGCAAGGTATTTGAG
CAGTTTCGCGGCCCGGGCATCGGAGGAATCCAACCCCTTAGCGGAATCGGATCTGGATTTGGCAAGCGTCACATC
AACAGCCTCGGAAACCTCGAGACGATTCCTCCCTACACCTCAAAGGATGGCGTCGAGTACAAGGCTGGCCGCACC
ATCATGGGCAAGCACTTTGGTGATATGCCTGCAAAGTCGATACTCGGCTTTCTACACGGACAGCGTCTGCAGCCT
CCTTTGCTACTCGAGACCGGCTGGCTCCTCGTCGGCCACGTAGACGAGTTCGTTCAGTTCGTCCCCTACGAAAAC
GATCTAGGCTTCACCATTGCCATTGCAGATACCAGGTCGGCAGTGCGTCTTATGCAGGAACTAGAGAAAGACGGC
CACGGCGGCGTCCTTGCCTGCACCTACCCAGCCAACGACATCGACATGGCCGACGTCAGCGACGCGGGCATAGGC
GTAACCATATCAGACCTCGCGAGCAACCAGACATTTCTAGATGGCAACGCCTACGCGCAGAAATACATGGACGCG
AACCTGGAGATGCTACTGGCCGAAATCCCTCTCTCCCCAGAGGACGTTATTCGTGTGCCTACCCTCTTCCGCACC
ATCGACTACCTATACCCGATGGGCACCGACGGGACTCCGCGGTGGAAGGACCCGCCTCCCAAAGGCGAGAAGCAA
GTGGCGGCCTTCAACCCAGAGGCCATCAACGGCATCGTCATCGGCAAGCACTACGTGAGCCCCAAGACGTTTGGA
CCGGTTGTCGACGGGGTGGATGTGCTTGCGAGAGCGACCGAGGCGGCGTACGCAAGGGCCGGGATGACGGTTCAC
TATGTTGATGATTTCAAGAGTCATCATCTGTCCACTGGCGAGGTTCATTGTGGGAGTAATACGCTGCGGCAGACT
GACTTGATTTGGTGGGCAAGGGGGATGAAGCAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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