© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|2815 |
| Gene name | |
| Location | scaffold_226:20244..21103 |
| Strand | + |
| Gene length (bp) | 859 |
| Transcript length (bp) | 588 |
| Coding sequence length (bp) | 585 |
| Protein length (aa) | 195 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1296 | 0.124 | 0.9179 | 0.0357 | 0.1416 | 0.0265 | 0.1407 | 0.0795 | 0.2074 | 0.0083 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 20 | 0.999659 |
| Orthofinder run ID | 4 |
| Orthogroup | 7312 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-floridani | Ophcf2|02418 |
| Ophiocordyceps camponoti-rufipedis | Ophun1|6762 |
| Ophiocordyceps kimflemingae | Ophio5|2815 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|2815 MKSSPLWTMLILSTSGTVQALPTSTSPKPASSSYQSLSTEGMVFLFDTLTSRLPKSPEAETSTLTPIELSSKRIR PMAANIDLVCLEDKASLEGLESVLGKKISRLSHRPQSQASSSGSKKLSGQDVNSRVLKSCLKKQNGQYIPDNFDV YCAEREALHLAEARQQPKEAVLDEILSQRFNSTATAIVKGRYTAL |
| Coding | >Ophio5|2815 ATGAAGTCTTCACCTCTCTGGACAATGCTCATCCTGTCTACGTCTGGCACTGTGCAAGCCCTGCCTACCTCGACT AGCCCCAAGCCGGCCTCTTCATCGTATCAGTCCCTGTCTACCGAGGGGATGGTCTTTTTATTCGATACTTTGACT TCGAGACTGCCAAAGAGCCCCGAAGCCGAGACATCGACTCTGACTCCCATCGAGCTCTCGTCGAAGCGGATACGT CCCATGGCGGCAAACATCGATCTCGTTTGCTTAGAGGATAAAGCGTCTCTCGAAGGGCTCGAGTCTGTACTCGGC AAGAAAATATCTCGACTCTCTCACAGGCCCCAGAGCCAGGCTTCATCCTCGGGGTCCAAGAAGCTGTCAGGGCAG GACGTAAACTCAAGGGTGCTGAAGTCATGCCTCAAGAAGCAAAACGGCCAGTATATTCCTGACAATTTCGATGTG TACTGCGCAGAGCGGGAAGCTTTGCATCTCGCCGAGGCACGACAGCAGCCCAAGGAGGCTGTATTGGATGAAATT TTGTCTCAGAGGTTCAACAGCACCGCAACAGCGATTGTTAAAGGTAGATATACTGCACTG |
| Transcript | >Ophio5|2815 ATGAAGTCTTCACCTCTCTGGACAATGCTCATCCTGTCTACGTCTGGCACTGTGCAAGCCCTGCCTACCTCGACT AGCCCCAAGCCGGCCTCTTCATCGTATCAGTCCCTGTCTACCGAGGGGATGGTCTTTTTATTCGATACTTTGACT TCGAGACTGCCAAAGAGCCCCGAAGCCGAGACATCGACTCTGACTCCCATCGAGCTCTCGTCGAAGCGGATACGT CCCATGGCGGCAAACATCGATCTCGTTTGCTTAGAGGATAAAGCGTCTCTCGAAGGGCTCGAGTCTGTACTCGGC AAGAAAATATCTCGACTCTCTCACAGGCCCCAGAGCCAGGCTTCATCCTCGGGGTCCAAGAAGCTGTCAGGGCAG GACGTAAACTCAAGGGTGCTGAAGTCATGCCTCAAGAAGCAAAACGGCCAGTATATTCCTGACAATTTCGATGTG TACTGCGCAGAGCGGGAAGCTTTGCATCTCGCCGAGGCACGACAGCAGCCCAAGGAGGCTGTATTGGATGAAATT TTGTCTCAGAGGTTCAACAGCACCGCAACAGCGATTGTTAAAGGTAGATATACTGCACTGTAA |
| Gene | >Ophio5|2815 ATGAAGTCTTCACCTCTCTGGACAATGCTCATCCTGTCTACGTCTGGCACTGTGCAAGCCCTGCCTACCTCGACT AGCCCCAAGCCGGCCTCTTCATCGTATCAGTCCCTGTCTACCGAGGGGATGGTCTTTTTATTCGATACTTTGACT TCGAGACTGCCAAAGAGCCCCGAAGCCGAGACATCGACTCTGACTCCCATCGAGCTCTCGTCGAAGCGTATGTCG AAACTATGAGCGGAGAAGCAATGTCGCCACTCCTTTTACAGTCCCTGTCGTTTGAGTAATTGTCGTGCTCTATTT GCAGAGAAGACCACCATCTTAAACGCATGCCGACACAACACAGGGATACGTCCCATGGCGGCAAACATCGATCTC GTTTGCTTAGAGGATAAAGCGTCTCTCGAAGGGCTCGAGTCTGTACTCGGCAAGAAAATATCTCGACTCTCTCAC AGGCCCCAGAGCCAGGCTTCATCCTCGGGGTCCAAGAAGCTGTCAGGGCAGGACGGTACGTTGCTATACTGTGAA GCTACAGCGCCGTCTCCTCAAGATTCCTCATGCCACTCTCTGCTGACATTTCTTCTGAACTATGTCTAGTAAACT CAAGGGTGCTGAAGTCATGCCTCAAGAAGCAAAACGGCCAGTATATTCCTGACAATTTCGATGTGTACTGCGCAG AGCGGGAAGCTTTGCATCTCGCCGAGGCACGACAGCAGCCCAAGGAGGCTGTATTGGATGAAATTTTGTCTCAGA GGTTCAACAGCACCGCAACAGCGATTGTTAAAGGTAGGTGGGTGGATCCTAGACTCGGACTCCTTGGAGCTGACA TGACCTCTTTTATCCTAGATATACTGCACTGTAA |