Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2815
Gene name
Locationscaffold_226:20244..21103
Strand+
Gene length (bp)859
Transcript length (bp)588
Coding sequence length (bp)585
Protein length (aa) 195

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2815
MKSSPLWTMLILSTSGTVQALPTSTSPKPASSSYQSLSTEGMVFLFDTLTSRLPKSPEAETSTLTPIELSSKRIR
PMAANIDLVCLEDKASLEGLESVLGKKISRLSHRPQSQASSSGSKKLSGQDVNSRVLKSCLKKQNGQYIPDNFDV
YCAEREALHLAEARQQPKEAVLDEILSQRFNSTATAIVKGRYTAL
Coding >Ophio5|2815
ATGAAGTCTTCACCTCTCTGGACAATGCTCATCCTGTCTACGTCTGGCACTGTGCAAGCCCTGCCTACCTCGACT
AGCCCCAAGCCGGCCTCTTCATCGTATCAGTCCCTGTCTACCGAGGGGATGGTCTTTTTATTCGATACTTTGACT
TCGAGACTGCCAAAGAGCCCCGAAGCCGAGACATCGACTCTGACTCCCATCGAGCTCTCGTCGAAGCGGATACGT
CCCATGGCGGCAAACATCGATCTCGTTTGCTTAGAGGATAAAGCGTCTCTCGAAGGGCTCGAGTCTGTACTCGGC
AAGAAAATATCTCGACTCTCTCACAGGCCCCAGAGCCAGGCTTCATCCTCGGGGTCCAAGAAGCTGTCAGGGCAG
GACGTAAACTCAAGGGTGCTGAAGTCATGCCTCAAGAAGCAAAACGGCCAGTATATTCCTGACAATTTCGATGTG
TACTGCGCAGAGCGGGAAGCTTTGCATCTCGCCGAGGCACGACAGCAGCCCAAGGAGGCTGTATTGGATGAAATT
TTGTCTCAGAGGTTCAACAGCACCGCAACAGCGATTGTTAAAGGTAGATATACTGCACTG
Transcript >Ophio5|2815
ATGAAGTCTTCACCTCTCTGGACAATGCTCATCCTGTCTACGTCTGGCACTGTGCAAGCCCTGCCTACCTCGACT
AGCCCCAAGCCGGCCTCTTCATCGTATCAGTCCCTGTCTACCGAGGGGATGGTCTTTTTATTCGATACTTTGACT
TCGAGACTGCCAAAGAGCCCCGAAGCCGAGACATCGACTCTGACTCCCATCGAGCTCTCGTCGAAGCGGATACGT
CCCATGGCGGCAAACATCGATCTCGTTTGCTTAGAGGATAAAGCGTCTCTCGAAGGGCTCGAGTCTGTACTCGGC
AAGAAAATATCTCGACTCTCTCACAGGCCCCAGAGCCAGGCTTCATCCTCGGGGTCCAAGAAGCTGTCAGGGCAG
GACGTAAACTCAAGGGTGCTGAAGTCATGCCTCAAGAAGCAAAACGGCCAGTATATTCCTGACAATTTCGATGTG
TACTGCGCAGAGCGGGAAGCTTTGCATCTCGCCGAGGCACGACAGCAGCCCAAGGAGGCTGTATTGGATGAAATT
TTGTCTCAGAGGTTCAACAGCACCGCAACAGCGATTGTTAAAGGTAGATATACTGCACTGTAA
Gene >Ophio5|2815
ATGAAGTCTTCACCTCTCTGGACAATGCTCATCCTGTCTACGTCTGGCACTGTGCAAGCCCTGCCTACCTCGACT
AGCCCCAAGCCGGCCTCTTCATCGTATCAGTCCCTGTCTACCGAGGGGATGGTCTTTTTATTCGATACTTTGACT
TCGAGACTGCCAAAGAGCCCCGAAGCCGAGACATCGACTCTGACTCCCATCGAGCTCTCGTCGAAGCGTATGTCG
AAACTATGAGCGGAGAAGCAATGTCGCCACTCCTTTTACAGTCCCTGTCGTTTGAGTAATTGTCGTGCTCTATTT
GCAGAGAAGACCACCATCTTAAACGCATGCCGACACAACACAGGGATACGTCCCATGGCGGCAAACATCGATCTC
GTTTGCTTAGAGGATAAAGCGTCTCTCGAAGGGCTCGAGTCTGTACTCGGCAAGAAAATATCTCGACTCTCTCAC
AGGCCCCAGAGCCAGGCTTCATCCTCGGGGTCCAAGAAGCTGTCAGGGCAGGACGGTACGTTGCTATACTGTGAA
GCTACAGCGCCGTCTCCTCAAGATTCCTCATGCCACTCTCTGCTGACATTTCTTCTGAACTATGTCTAGTAAACT
CAAGGGTGCTGAAGTCATGCCTCAAGAAGCAAAACGGCCAGTATATTCCTGACAATTTCGATGTGTACTGCGCAG
AGCGGGAAGCTTTGCATCTCGCCGAGGCACGACAGCAGCCCAAGGAGGCTGTATTGGATGAAATTTTGTCTCAGA
GGTTCAACAGCACCGCAACAGCGATTGTTAAAGGTAGGTGGGTGGATCCTAGACTCGGACTCCTTGGAGCTGACA
TGACCTCTTTTATCCTAGATATACTGCACTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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