© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|2812 |
| Gene name | |
| Location | scaffold_226:8811..10705 |
| Strand | - |
| Gene length (bp) | 1894 |
| Transcript length (bp) | 1842 |
| Coding sequence length (bp) | 1839 |
| Protein length (aa) | 613 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00722 | Glyco_hydro_16 | Glycosyl hydrolases family 16 | 1.6E-38 | 194 | 359 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4B4J2|CRH12_ARTBC | Probable extracellular glycosidase ARB_03382 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03382 PE=3 SV=2 | 150 | 465 | 1.0E-89 |
| sp|Q8J0P4|CRF1_ASPFU | Probable glycosidase crf1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=crf1 PE=1 SV=2 | 156 | 404 | 3.0E-76 |
| sp|Q5AFA2|CRH11_CANAL | Extracellular glycosidase CRH11 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CRH11 PE=1 SV=1 | 140 | 415 | 6.0E-64 |
| sp|P53301|CRH1_YEAST | Probable glycosidase CRH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CRH1 PE=1 SV=1 | 163 | 406 | 3.0E-61 |
| sp|D4ALQ5|CRH11_ARTBC | Probable extracellular glycosidase ARB_05253 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05253 PE=1 SV=2 | 158 | 401 | 3.0E-61 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4B4J2|CRH12_ARTBC | Probable extracellular glycosidase ARB_03382 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03382 PE=3 SV=2 | 150 | 465 | 1.0E-89 |
| sp|Q8J0P4|CRF1_ASPFU | Probable glycosidase crf1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=crf1 PE=1 SV=2 | 156 | 404 | 3.0E-76 |
| sp|Q5AFA2|CRH11_CANAL | Extracellular glycosidase CRH11 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CRH11 PE=1 SV=1 | 140 | 415 | 6.0E-64 |
| sp|P53301|CRH1_YEAST | Probable glycosidase CRH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CRH1 PE=1 SV=1 | 163 | 406 | 3.0E-61 |
| sp|D4ALQ5|CRH11_ARTBC | Probable extracellular glycosidase ARB_05253 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05253 PE=1 SV=2 | 158 | 401 | 3.0E-61 |
| sp|Q5AK54|CRH12_CANAL | Extracellular glycosidase CRH12 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CRH12 PE=1 SV=1 | 162 | 405 | 6.0E-33 |
| sp|Q75A41|CRR1_ASHGO | Probable glycosidase CRR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CRR1 PE=3 SV=1 | 201 | 397 | 9.0E-27 |
| sp|Q5AJC0|UTR2_CANAL | Extracellular glycosidase UTR2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UTR2 PE=1 SV=1 | 146 | 426 | 6.0E-25 |
| sp|Q4WI46|CRF2_ASPFU | Probable glycosidase crf2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=crf1 PE=1 SV=1 | 221 | 402 | 2.0E-23 |
| sp|Q05790|CRR1_YEAST | Probable glycosidase CRR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CRR1 PE=2 SV=1 | 227 | 384 | 4.0E-20 |
| sp|P32623|CRH2_YEAST | Probable glycosidase CRH2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UTR2 PE=1 SV=3 | 184 | 371 | 3.0E-17 |
| sp|Q84C00|GUB_CLOTM | Beta-glucanase OS=Clostridium thermocellum GN=licB PE=1 SV=1 | 222 | 360 | 1.0E-09 |
| sp|A3DBX3|GUB_CLOTH | Beta-glucanase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) GN=licB PE=1 SV=1 | 222 | 360 | 4.0E-09 |
| sp|P37073|GUB_BREBE | Beta-glucanase OS=Brevibacillus brevis GN=bglBB PE=1 SV=1 | 221 | 346 | 2.0E-08 |
| sp|Q9M0D1|XTH19_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1 | 227 | 379 | 7.0E-08 |
| sp|P23904|GUB_PAEMA | Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2 | 198 | 346 | 3.0E-07 |
| sp|Q9FI31|XTH20_ARATH | Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1 | 227 | 379 | 3.0E-07 |
| sp|O14412|GUB_ORPSP | Beta-glucanase OS=Orpinomyces sp. (strain PC-2) GN=licA PE=1 SV=1 | 162 | 346 | 4.0E-07 |
| sp|Q9M0D2|XTH18_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1 | 227 | 379 | 5.0E-07 |
| sp|Q38857|XTH22_ARATH | Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1 | 221 | 371 | 7.0E-07 |
| sp|P45797|GUB_PAEPO | Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1 | 198 | 346 | 1.0E-06 |
| sp|O80803|XTH17_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=1 SV=1 | 227 | 379 | 1.0E-06 |
| sp|Q9ZV40|XTH21_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1 | 215 | 396 | 1.0E-06 |
| sp|Q9SVV2|XTH26_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1 | 145 | 371 | 2.0E-06 |
| sp|Q8LF99|XTH6_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2 | 205 | 379 | 2.0E-06 |
| sp|P27051|GUB_BACLI | Beta-glucanase OS=Bacillus licheniformis GN=bg1 PE=1 SV=1 | 229 | 360 | 2.0E-06 |
| sp|Q9FKL9|XTH12_ARATH | Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1 | 221 | 371 | 2.0E-06 |
| sp|P07980|GUB_BACAM | Beta-glucanase OS=Bacillus amyloliquefaciens GN=bglA PE=3 SV=1 | 229 | 346 | 3.0E-06 |
| sp|P04957|GUB_BACSU | Beta-glucanase OS=Bacillus subtilis (strain 168) GN=bglS PE=1 SV=2 | 229 | 360 | 5.0E-06 |
| sp|Q41638|XTHA_PHAAN | Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1 | 149 | 370 | 6.0E-06 |
| sp|Q38911|XTH15_ARATH | Xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1 | 221 | 375 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0016787 | hydrolase activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0008150 | biological_process | No |
| GO:0003674 | molecular_function | No |
| GO:0008152 | metabolic process | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 434 | 456 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|2812 MLLLSALLRSSCCTSSLCFTLLPSFPFLPHISFSRLTFSPFFFIPLQSLLKALVCLSLVTASPVVRSFVRALDRY CIPSVETNPPFVELPPPSRLYDIHRLLSNAQNFPWLTSASPLPRSSPDLWAPIAGGDSDESPFTMRVRHLLASTA LLCLAAGQVTTKCNPLERDNCPPDPAFGSDHVWYFNSTPEADLWETTAGVVDYTSDGAAFTIKQQGDSPTLRTKF YFFFGRTELWLKVAPGTGIISSMMWLSDDLDEVDWEFLGSNKSFATTNYFGKGSQDWHNGGAHPMTGMQDDFHNY TTTWTKDQLEWYIDGNLVRTLHAADANDTRNYPQSPMRMSIGIWAGGDPSLPEGTRKWAGGDTDYSAAPFTMWLQ KAQVTDYSSGHQYVFGDRSGSWQSIKIEGGSSRAQDTLAKAPGKSTGDKWNDLPGGAKAAVYSGVGVVAAIAFAA LLFYFVRQRRRGALEAQRAEERANAERLEMERFEGKGMDPAALTGEAHGHGAEEMRVARPSDAESYHVPETTTSS PLARGSWGIAAAAGGGFSPNVGPGSGRASPAMSQHEGSNGRPQGPTSGLGLTRAQSPLSRNGTPIYHSQSPGMPP SGPLPSPRDGSRS |
| Coding | >Ophio5|2812 ATGCTTCTTCTCTCTGCCCTCCTCCGGTCCTCTTGTTGCACCTCCAGTCTCTGCTTCACACTCCTTCCGTCTTTT CCTTTTCTTCCTCATATCTCGTTCTCTCGACTCACATTCTCTCCATTCTTCTTTATTCCCCTACAGTCTCTTCTC AAGGCTCTTGTCTGTCTGTCCCTCGTGACTGCTTCGCCAGTCGTTCGCTCTTTCGTCCGCGCCCTCGACAGATAT TGCATTCCCTCGGTCGAGACAAATCCGCCTTTCGTTGAACTACCGCCACCCTCGCGTCTCTACGACATCCATCGT CTCCTATCGAATGCGCAAAACTTCCCGTGGCTCACATCCGCCTCACCTCTGCCACGAAGCTCTCCTGATCTTTGG GCTCCGATCGCGGGAGGTGACAGTGACGAATCCCCCTTCACGATGCGTGTCCGACACCTTCTCGCCTCGACGGCC CTGCTGTGCCTCGCCGCCGGCCAGGTGACGACAAAGTGTAATCCCTTGGAGCGCGACAACTGTCCACCCGACCCG GCCTTTGGCTCCGACCATGTCTGGTATTTCAACAGCACCCCGGAAGCCGACCTGTGGGAGACGACGGCCGGCGTC GTCGACTACACCTCCGATGGGGCTGCCTTCACCATCAAACAGCAAGGTGACTCGCCTACCCTCCGTACAAAGTTC TACTTCTTCTTCGGCCGCACCGAGCTCTGGCTCAAGGTCGCCCCTGGCACCGGCATTATCAGTTCCATGATGTGG CTGAGCGACGACCTCGACGAGGTCGATTGGGAGTTTCTCGGCTCCAACAAGAGCTTCGCCACGACAAACTACTTT GGCAAAGGCTCTCAAGACTGGCACAACGGCGGTGCCCACCCAATGACGGGCATGCAGGACGACTTCCACAACTAC ACCACCACCTGGACCAAGGACCAGCTCGAGTGGTACATCGACGGCAACCTCGTCCGTACCCTACACGCCGCCGAC GCCAACGACACGCGTAACTACCCGCAATCCCCCATGCGCATGAGCATCGGCATCTGGGCCGGCGGCGACCCTTCT CTGCCCGAGGGCACCCGCAAATGGGCCGGCGGCGACACCGACTACAGCGCCGCGCCCTTTACCATGTGGCTACAA AAGGCCCAAGTCACCGACTATAGCTCGGGCCACCAATACGTCTTTGGCGACAGGTCGGGCAGTTGGCAGAGCATC AAGATTGAAGGTGGGAGCTCTCGCGCCCAAGACACGCTCGCCAAGGCGCCGGGGAAGTCCACCGGTGACAAGTGG AACGATTTGCCGGGCGGTGCCAAGGCGGCCGTGTACAGCGGCGTTGGCGTCGTCGCTGCCATTGCCTTCGCCGCT CTGCTATTCTACTTCGTCCGCCAACGACGCCGCGGTGCCCTGGAAGCCCAGCGGGCCGAGGAGCGGGCCAACGCC GAACGCCTCGAGATGGAGCGCTTTGAAGGCAAAGGCATGGATCCCGCCGCGCTCACCGGAGAGGCCCACGGTCAC GGCGCCGAGGAGATGCGTGTCGCCCGTCCCAGCGATGCCGAGTCGTACCATGTGCCCGAGACGACCACCTCAAGC CCCCTGGCCAGAGGCTCCTGGGGCATCGCCGCCGCCGCCGGAGGCGGCTTCTCGCCCAATGTCGGACCGGGCTCG GGCCGCGCCAGTCCGGCCATGTCCCAACACGAAGGGAGCAACGGACGTCCACAGGGGCCGACTTCGGGCTTGGGC TTGACGCGCGCGCAGAGCCCGCTCTCCAGAAATGGTACACCTATCTACCACTCGCAAAGTCCGGGCATGCCGCCG TCAGGTCCGCTACCGTCACCGCGAGACGGGTCTCGCAGC |
| Transcript | >Ophio5|2812 ATGCTTCTTCTCTCTGCCCTCCTCCGGTCCTCTTGTTGCACCTCCAGTCTCTGCTTCACACTCCTTCCGTCTTTT CCTTTTCTTCCTCATATCTCGTTCTCTCGACTCACATTCTCTCCATTCTTCTTTATTCCCCTACAGTCTCTTCTC AAGGCTCTTGTCTGTCTGTCCCTCGTGACTGCTTCGCCAGTCGTTCGCTCTTTCGTCCGCGCCCTCGACAGATAT TGCATTCCCTCGGTCGAGACAAATCCGCCTTTCGTTGAACTACCGCCACCCTCGCGTCTCTACGACATCCATCGT CTCCTATCGAATGCGCAAAACTTCCCGTGGCTCACATCCGCCTCACCTCTGCCACGAAGCTCTCCTGATCTTTGG GCTCCGATCGCGGGAGGTGACAGTGACGAATCCCCCTTCACGATGCGTGTCCGACACCTTCTCGCCTCGACGGCC CTGCTGTGCCTCGCCGCCGGCCAGGTGACGACAAAGTGTAATCCCTTGGAGCGCGACAACTGTCCACCCGACCCG GCCTTTGGCTCCGACCATGTCTGGTATTTCAACAGCACCCCGGAAGCCGACCTGTGGGAGACGACGGCCGGCGTC GTCGACTACACCTCCGATGGGGCTGCCTTCACCATCAAACAGCAAGGTGACTCGCCTACCCTCCGTACAAAGTTC TACTTCTTCTTCGGCCGCACCGAGCTCTGGCTCAAGGTCGCCCCTGGCACCGGCATTATCAGTTCCATGATGTGG CTGAGCGACGACCTCGACGAGGTCGATTGGGAGTTTCTCGGCTCCAACAAGAGCTTCGCCACGACAAACTACTTT GGCAAAGGCTCTCAAGACTGGCACAACGGCGGTGCCCACCCAATGACGGGCATGCAGGACGACTTCCACAACTAC ACCACCACCTGGACCAAGGACCAGCTCGAGTGGTACATCGACGGCAACCTCGTCCGTACCCTACACGCCGCCGAC GCCAACGACACGCGTAACTACCCGCAATCCCCCATGCGCATGAGCATCGGCATCTGGGCCGGCGGCGACCCTTCT CTGCCCGAGGGCACCCGCAAATGGGCCGGCGGCGACACCGACTACAGCGCCGCGCCCTTTACCATGTGGCTACAA AAGGCCCAAGTCACCGACTATAGCTCGGGCCACCAATACGTCTTTGGCGACAGGTCGGGCAGTTGGCAGAGCATC AAGATTGAAGGTGGGAGCTCTCGCGCCCAAGACACGCTCGCCAAGGCGCCGGGGAAGTCCACCGGTGACAAGTGG AACGATTTGCCGGGCGGTGCCAAGGCGGCCGTGTACAGCGGCGTTGGCGTCGTCGCTGCCATTGCCTTCGCCGCT CTGCTATTCTACTTCGTCCGCCAACGACGCCGCGGTGCCCTGGAAGCCCAGCGGGCCGAGGAGCGGGCCAACGCC GAACGCCTCGAGATGGAGCGCTTTGAAGGCAAAGGCATGGATCCCGCCGCGCTCACCGGAGAGGCCCACGGTCAC GGCGCCGAGGAGATGCGTGTCGCCCGTCCCAGCGATGCCGAGTCGTACCATGTGCCCGAGACGACCACCTCAAGC CCCCTGGCCAGAGGCTCCTGGGGCATCGCCGCCGCCGCCGGAGGCGGCTTCTCGCCCAATGTCGGACCGGGCTCG GGCCGCGCCAGTCCGGCCATGTCCCAACACGAAGGGAGCAACGGACGTCCACAGGGGCCGACTTCGGGCTTGGGC TTGACGCGCGCGCAGAGCCCGCTCTCCAGAAATGGTACACCTATCTACCACTCGCAAAGTCCGGGCATGCCGCCG TCAGGTCCGCTACCGTCACCGCGAGACGGGTCTCGCAGCTAG |
| Gene | >Ophio5|2812 ATGCTTCTTCTCTCTGCCCTCCTCCGGTCCTCTTGTTGCACCTCCAGTCTCTGCTTCACACTCCTTCCGTCTTTT CCTTTTCTTCCTCATATCTCGTTCTCTCGACTCACATTCTCTCCATTCTTCTTTATTCCCCTACAGTCTCTTCTC AAGGCTCTTGTCTGTCTGTCCCTCGTGACTGCTTCGCCAGTCGTTCGCTCTTTCGTCCGCGCCCTCGACAGATAT TGCATTCCCTCGGTCGAGACAAATCCGCCTTTCGTTGAACTACCGCCACCCTCGCGTCTCTACGACATCCATCGT CTCCTATCGAATGCGCAAAACTTCCCGTGGCTCACATCCGCCTCACCTCTGCCACGAAGCTCTCCTGATCTTTGG GCTCCGATCGCGGGAGGTGACAGTGACGAATCCCCCTTCACGATGCGTGTCCGACACCTTCTCGCCTCGACGGCC CTGCTGTGCCTCGCCGCCGGCCAGGTGACGACAAAGTGTAATCCCTTGGAGCGCGACAACTGTCCACCCGACCCG GCCTTTGGCTCCGACCATGTCTGGTATTTCAACAGCACCCCGGAAGCCGACCTGTGGGAGACGACGGCCGGCGTC GTCGACTACACCTCCGATGGGGCTGCCTTCACCATCAAACAGCAAGGTGACTCGCCTACCCTCCGTACAAAGTTC TACTTCTTCTTCGGCCGCACCGAGCTCTGGCTCAAGGTCGCCCCTGGCACCGGCATTATCAGTTCCATGATGTGG CTGAGCGACGACCTCGACGAGGTCGATTGGGAGTTTCTCGGCTCCAACAAGAGCTTCGCCACGACAAACTACTTT GGCAAAGGCTCTCAAGACTGGCACAACGGCGGTGCCCACCCAATGACGGGCATGCAGGACGACTTCCACAACTAC ACCACCACCTGGACCAAGGACCAGCTCGAGTGGTACATCGACGGCAACCTCGTCCGTACCCTACACGCCGCCGAC GCCAACGACACGCGTAACTACCCGCAATCCCCCATGCGCATGAGCATCGGCATCTGGGCCGGCGGCGACCCTTCT CTGCCCGAGGGCACCCGCAAATGGGCCGGCGGCGACACCGACTACAGCGCCGCGCCCTTTACCATGTGGCTACAA AAGGCCCAAGTCACCGACTATAGCTCGGGCCACCAATACGTCTTTGGCGACAGGTCGGGCAGTTGGCAGAGCATC AAGATTGAAGGGTGAGTTTCCTCCGCTCCGTCATTGAGCGTCATTGACGCTGACCCGCCACAGTGGGAGCTCTCG CGCCCAAGACACGCTCGCCAAGGCGCCGGGGAAGTCCACCGGTGACAAGTGGAACGATTTGCCGGGCGGTGCCAA GGCGGCCGTGTACAGCGGCGTTGGCGTCGTCGCTGCCATTGCCTTCGCCGCTCTGCTATTCTACTTCGTCCGCCA ACGACGCCGCGGTGCCCTGGAAGCCCAGCGGGCCGAGGAGCGGGCCAACGCCGAACGCCTCGAGATGGAGCGCTT TGAAGGCAAAGGCATGGATCCCGCCGCGCTCACCGGAGAGGCCCACGGTCACGGCGCCGAGGAGATGCGTGTCGC CCGTCCCAGCGATGCCGAGTCGTACCATGTGCCCGAGACGACCACCTCAAGCCCCCTGGCCAGAGGCTCCTGGGG CATCGCCGCCGCCGCCGGAGGCGGCTTCTCGCCCAATGTCGGACCGGGCTCGGGCCGCGCCAGTCCGGCCATGTC CCAACACGAAGGGAGCAACGGACGTCCACAGGGGCCGACTTCGGGCTTGGGCTTGACGCGCGCGCAGAGCCCGCT CTCCAGAAATGGTACACCTATCTACCACTCGCAAAGTCCGGGCATGCCGCCGTCAGGTCCGCTACCGTCACCGCG AGACGGGTCTCGCAGCTAG |