Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2799
Gene name
Locationscaffold_225:10566..11553
Strand+
Gene length (bp)987
Transcript length (bp)987
Coding sequence length (bp)984
Protein length (aa) 328

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09736 Bud13 Pre-mRNA-splicing factor of RES complex 1.1E-49 169 312

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q52F10|CWC26_MAGO7 Pre-mRNA-splicing factor CWC26 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CWC26 PE=3 SV=1 1 328 2.0E-89
sp|Q7RWR8|CWC26_NEUCR Pre-mRNA-splicing factor cwc-26 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cwc-26 PE=3 SV=1 1 328 8.0E-88
sp|Q5AWZ6|CWC26_EMENI Pre-mRNA-splicing factor cwc26 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cwc26 PE=3 SV=1 6 328 2.0E-80
sp|Q4W9Z9|CWC26_ASPFU Pre-mRNA-splicing factor cwc26 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cwc26 PE=3 SV=1 2 328 4.0E-71
sp|P0CN00|CWC26_CRYNJ Pre-mRNA-splicing factor CWC26 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CWC26 PE=3 SV=1 3 328 2.0E-29
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Swissprot ID Swissprot Description Start End E-value
sp|Q52F10|CWC26_MAGO7 Pre-mRNA-splicing factor CWC26 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CWC26 PE=3 SV=1 1 328 2.0E-89
sp|Q7RWR8|CWC26_NEUCR Pre-mRNA-splicing factor cwc-26 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cwc-26 PE=3 SV=1 1 328 8.0E-88
sp|Q5AWZ6|CWC26_EMENI Pre-mRNA-splicing factor cwc26 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cwc26 PE=3 SV=1 6 328 2.0E-80
sp|Q4W9Z9|CWC26_ASPFU Pre-mRNA-splicing factor cwc26 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cwc26 PE=3 SV=1 2 328 4.0E-71
sp|P0CN00|CWC26_CRYNJ Pre-mRNA-splicing factor CWC26 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CWC26 PE=3 SV=1 3 328 2.0E-29
sp|P0CN01|CWC26_CRYNB Pre-mRNA-splicing factor CWC26 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CWC26 PE=3 SV=1 3 328 2.0E-29
sp|O94417|CWC26_SCHPO Pre-mRNA-splicing factor cwf26 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf26 PE=1 SV=2 136 328 1.0E-28
sp|Q9BRD0|BUD13_HUMAN BUD13 homolog OS=Homo sapiens GN=BUD13 PE=1 SV=1 153 328 4.0E-25
sp|Q8R149|BUD13_MOUSE BUD13 homolog OS=Mus musculus GN=Bud13 PE=1 SV=1 126 328 5.0E-24
sp|Q4QQU1|BUD13_RAT BUD13 homolog OS=Rattus norvegicus GN=Bud13 PE=1 SV=1 169 328 8.0E-24
sp|Q5ZIJ0|BUD13_CHICK BUD13 homolog OS=Gallus gallus GN=BUD13 PE=2 SV=1 128 328 9.0E-22
sp|P30640|BUD13_CAEEL BUD13 homolog OS=Caenorhabditis elegans GN=R08D7.1 PE=3 SV=1 131 322 4.0E-21
sp|Q6CAX1|CWC26_YARLI Pre-mRNA-splicing factor CWC26 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CWC26 PE=3 SV=1 168 327 7.0E-20
sp|Q4PI72|CWC26_USTMA Pre-mRNA-splicing factor CWC26 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CWC26 PE=3 SV=1 32 324 3.0E-18
sp|Q6BU18|CWC26_DEBHA Pre-mRNA-splicing factor CWC26 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CWC26 PE=3 SV=2 164 304 1.0E-16
sp|Q75AG5|CWC26_ASHGO Pre-mRNA-splicing factor CWC26 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CWC26 PE=3 SV=1 127 308 1.0E-13
sp|Q5AL13|CWC26_CANAL Pre-mRNA-splicing factor CWC26 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CWC26 PE=3 SV=1 168 304 4.0E-11
sp|Q6CJ08|CWC26_KLULA Pre-mRNA-splicing factor CWC26 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=CWC26 PE=3 SV=1 129 308 4.0E-10
sp|Q6FL63|CWC26_CANGA Pre-mRNA-splicing factor CWC26 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CWC26 PE=3 SV=1 169 309 1.0E-09
sp|P46947|CWC26_YEAST Pre-mRNA-splicing factor CWC26 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BUD13 PE=1 SV=1 170 327 4.0E-07
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2799
MPSDLSNYLASRYLVADPKPSSKKRKRKRPDSSGLLITDDDDSAWARPQPQPGDDQDEDDPTTVSGTTADFRKAK
KSGWKRVGVGAEAAAALKSDQAAADAVIAAAVAENQAARAADDEAPVVDDVIMMSDGTHAGLQSAAAVSAQLKRR
RRQEEQDFEAHRQSAQEQETVYRDATGRRIDISMKRAEARRAALEAEQKELQAKEALKGEAQLDESRKRRGQLSD
ARNMAFARTADDEQMNKELKERQRWNDPMAQFLGDSKADGTGKKASKRHPVYTGAALPNRYGIRPGYRWDGVDRS
NGFEGNRFKAINKRERNKALAYSWQMDE
Coding >Ophio5|2799
ATGCCGTCAGACCTCTCCAACTACCTCGCGTCTCGCTATCTCGTCGCAGACCCGAAACCAAGCTCTAAGAAGCGC
AAACGCAAGCGCCCAGACTCTTCCGGCCTGCTCATCACCGATGATGACGACTCGGCCTGGGCACGCCCGCAACCG
CAGCCAGGTGATGACCAAGACGAAGATGACCCGACCACCGTCTCCGGAACGACGGCCGACTTTCGAAAGGCCAAG
AAGAGCGGATGGAAGAGGGTCGGAGTCGGAGCAGAAGCCGCGGCCGCCTTGAAATCAGACCAGGCCGCCGCAGAC
GCCGTCATCGCCGCGGCCGTTGCGGAAAACCAAGCCGCCAGAGCTGCAGACGATGAAGCCCCCGTCGTGGATGAC
GTCATCATGATGAGCGACGGTACCCATGCCGGTCTGCAGAGCGCCGCCGCCGTCTCCGCTCAGCTGAAGCGCCGA
CGACGGCAAGAGGAGCAAGACTTTGAGGCACATCGTCAATCTGCCCAGGAGCAGGAAACCGTCTACCGAGATGCC
ACAGGTCGAAGGATTGACATCTCCATGAAGAGAGCCGAAGCTAGACGCGCTGCCCTAGAGGCTGAGCAGAAGGAG
CTACAGGCCAAGGAGGCGCTTAAGGGAGAAGCACAGTTGGACGAGTCGCGGAAGCGAAGGGGCCAGCTTTCAGAC
GCCAGGAACATGGCCTTTGCCAGGACGGCTGACGATGAGCAGATGAACAAGGAACTCAAAGAGCGCCAAAGGTGG
AACGATCCCATGGCGCAGTTCTTGGGCGACAGTAAGGCCGACGGCACTGGCAAGAAGGCATCCAAACGACACCCA
GTCTACACGGGTGCTGCTCTTCCTAATCGCTATGGTATCAGGCCTGGATACCGCTGGGACGGCGTCGATCGCAGC
AATGGGTTTGAGGGGAATCGCTTCAAGGCAATCAACAAACGAGAGAGGAACAAGGCACTGGCGTACTCGTGGCAG
ATGGACGAG
Transcript >Ophio5|2799
ATGCCGTCAGACCTCTCCAACTACCTCGCGTCTCGCTATCTCGTCGCAGACCCGAAACCAAGCTCTAAGAAGCGC
AAACGCAAGCGCCCAGACTCTTCCGGCCTGCTCATCACCGATGATGACGACTCGGCCTGGGCACGCCCGCAACCG
CAGCCAGGTGATGACCAAGACGAAGATGACCCGACCACCGTCTCCGGAACGACGGCCGACTTTCGAAAGGCCAAG
AAGAGCGGATGGAAGAGGGTCGGAGTCGGAGCAGAAGCCGCGGCCGCCTTGAAATCAGACCAGGCCGCCGCAGAC
GCCGTCATCGCCGCGGCCGTTGCGGAAAACCAAGCCGCCAGAGCTGCAGACGATGAAGCCCCCGTCGTGGATGAC
GTCATCATGATGAGCGACGGTACCCATGCCGGTCTGCAGAGCGCCGCCGCCGTCTCCGCTCAGCTGAAGCGCCGA
CGACGGCAAGAGGAGCAAGACTTTGAGGCACATCGTCAATCTGCCCAGGAGCAGGAAACCGTCTACCGAGATGCC
ACAGGTCGAAGGATTGACATCTCCATGAAGAGAGCCGAAGCTAGACGCGCTGCCCTAGAGGCTGAGCAGAAGGAG
CTACAGGCCAAGGAGGCGCTTAAGGGAGAAGCACAGTTGGACGAGTCGCGGAAGCGAAGGGGCCAGCTTTCAGAC
GCCAGGAACATGGCCTTTGCCAGGACGGCTGACGATGAGCAGATGAACAAGGAACTCAAAGAGCGCCAAAGGTGG
AACGATCCCATGGCGCAGTTCTTGGGCGACAGTAAGGCCGACGGCACTGGCAAGAAGGCATCCAAACGACACCCA
GTCTACACGGGTGCTGCTCTTCCTAATCGCTATGGTATCAGGCCTGGATACCGCTGGGACGGCGTCGATCGCAGC
AATGGGTTTGAGGGGAATCGCTTCAAGGCAATCAACAAACGAGAGAGGAACAAGGCACTGGCGTACTCGTGGCAG
ATGGACGAGTAG
Gene >Ophio5|2799
ATGCCGTCAGACCTCTCCAACTACCTCGCGTCTCGCTATCTCGTCGCAGACCCGAAACCAAGCTCTAAGAAGCGC
AAACGCAAGCGCCCAGACTCTTCCGGCCTGCTCATCACCGATGATGACGACTCGGCCTGGGCACGCCCGCAACCG
CAGCCAGGTGATGACCAAGACGAAGATGACCCGACCACCGTCTCCGGAACGACGGCCGACTTTCGAAAGGCCAAG
AAGAGCGGATGGAAGAGGGTCGGAGTCGGAGCAGAAGCCGCGGCCGCCTTGAAATCAGACCAGGCCGCCGCAGAC
GCCGTCATCGCCGCGGCCGTTGCGGAAAACCAAGCCGCCAGAGCTGCAGACGATGAAGCCCCCGTCGTGGATGAC
GTCATCATGATGAGCGACGGTACCCATGCCGGTCTGCAGAGCGCCGCCGCCGTCTCCGCTCAGCTGAAGCGCCGA
CGACGGCAAGAGGAGCAAGACTTTGAGGCACATCGTCAATCTGCCCAGGAGCAGGAAACCGTCTACCGAGATGCC
ACAGGTCGAAGGATTGACATCTCCATGAAGAGAGCCGAAGCTAGACGCGCTGCCCTAGAGGCTGAGCAGAAGGAG
CTACAGGCCAAGGAGGCGCTTAAGGGAGAAGCACAGTTGGACGAGTCGCGGAAGCGAAGGGGCCAGCTTTCAGAC
GCCAGGAACATGGCCTTTGCCAGGACGGCTGACGATGAGCAGATGAACAAGGAACTCAAAGAGCGCCAAAGGTGG
AACGATCCCATGGCGCAGTTCTTGGGCGACAGTAAGGCCGACGGCACTGGCAAGAAGGCATCCAAACGACACCCA
GTCTACACGGGTGCTGCTCTTCCTAATCGCTATGGTATCAGGCCTGGATACCGCTGGGACGGCGTCGATCGCAGC
AATGGGTTTGAGGGGAATCGCTTCAAGGCAATCAACAAACGAGAGAGGAACAAGGCACTGGCGTACTCGTGGCAG
ATGGACGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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