Protein ID | Ophio5|2783 |
Gene name | |
Location | scaffold_224:2256..2952 |
Strand | + |
Gene length (bp) | 696 |
Transcript length (bp) | 696 |
Coding sequence length (bp) | 693 |
Protein length (aa) | 231 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08510 | PIG-P | PIG-P | 9.9E-54 | 85 | 223 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O13904|MUG84_SCHPO | Meiotically up-regulated gene 84 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug84 PE=1 SV=3 | 33 | 196 | 2.0E-37 |
sp|Q9JHG1|PIGP_MOUSE | Phosphatidylinositol N-acetylglucosaminyltransferase subunit P OS=Mus musculus GN=Pigp PE=2 SV=1 | 83 | 228 | 4.0E-14 |
sp|Q5R946|PIGP_PONAB | Phosphatidylinositol N-acetylglucosaminyltransferase subunit P OS=Pongo abelii GN=PIGP PE=2 SV=1 | 83 | 228 | 9.0E-14 |
sp|P57054|PIGP_HUMAN | Phosphatidylinositol N-acetylglucosaminyltransferase subunit P OS=Homo sapiens GN=PIGP PE=1 SV=3 | 83 | 228 | 2.0E-13 |
sp|O64792|PIGP_ARATH | Phosphatidylinositol N-acetylglucosaminyltransferase subunit P OS=Arabidopsis thaliana GN=At1g61280 PE=2 SV=1 | 85 | 150 | 2.0E-09 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O13904|MUG84_SCHPO | Meiotically up-regulated gene 84 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug84 PE=1 SV=3 | 33 | 196 | 2.0E-37 |
sp|Q9JHG1|PIGP_MOUSE | Phosphatidylinositol N-acetylglucosaminyltransferase subunit P OS=Mus musculus GN=Pigp PE=2 SV=1 | 83 | 228 | 4.0E-14 |
sp|Q5R946|PIGP_PONAB | Phosphatidylinositol N-acetylglucosaminyltransferase subunit P OS=Pongo abelii GN=PIGP PE=2 SV=1 | 83 | 228 | 9.0E-14 |
sp|P57054|PIGP_HUMAN | Phosphatidylinositol N-acetylglucosaminyltransferase subunit P OS=Homo sapiens GN=PIGP PE=1 SV=3 | 83 | 228 | 2.0E-13 |
sp|O64792|PIGP_ARATH | Phosphatidylinositol N-acetylglucosaminyltransferase subunit P OS=Arabidopsis thaliana GN=At1g61280 PE=2 SV=1 | 85 | 150 | 2.0E-09 |
sp|Q04082|GPI19_YEAST | Phosphatidylinositol N-acetylglucosaminyltransferase subunit GPI19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPI19 PE=1 SV=1 | 85 | 176 | 3.0E-08 |
sp|Q756D4|GPI19_ASHGO | Phosphatidylinositol N-acetylglucosaminyltransferase subunit GPI19 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GPI19 PE=3 SV=1 | 123 | 230 | 1.0E-06 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Endoplasmic reticulum | Signal peptide|Transmembrane domain | 0.1367 | 0.2071 | 0.0117 | 0.0746 | 0.0924 | 0.0025 | 0.7613 | 0.2282 | 0.3585 | 0.0515 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 88 | 107 | 19 |
2 | 127 | 149 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 2008 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|2783 MSASSEEKDEYLSDNQSSDSSGHEWPARPLSQTYFAPPFYGRPPTPLPPSPSLTSLLRPSRPTTPDASDDDNMAP VPRASPQVPTYEYYGFVLYLFSSLTFLLWLLWSYLPAPFLHGLGIYYYPNRWWALAIPAFLTMTLCYIYVALASY NTEILTLPMASVETVVDGAGKLAVIDAKGRLRGSSKRERKCDSNGRLRWREVWNEGTDAVMDIPLAGVCEVLYGD GREEAA |
Coding | >Ophio5|2783 ATGTCGGCCTCATCGGAGGAGAAAGACGAGTATCTCTCGGATAACCAGTCCTCCGACTCGTCTGGTCACGAGTGG CCGGCTCGGCCCCTGTCGCAAACGTACTTCGCGCCGCCCTTCTACGGCCGCCCGCCGACGCCGCTGCCTCCTTCG CCGTCGCTGACGTCGCTCCTTCGACCGTCGCGCCCGACGACGCCAGACGCCTCGGACGATGACAACATGGCGCCG GTGCCCCGCGCGTCGCCCCAGGTGCCGACATATGAATACTACGGTTTCGTGCTGTACTTGTTCAGTAGCCTGACG TTTCTACTATGGCTCCTCTGGAGCTATCTACCGGCGCCCTTTCTGCATGGCCTGGGTATCTACTATTATCCGAAT CGGTGGTGGGCGCTGGCCATTCCTGCCTTTCTCACCATGACACTGTGCTACATCTATGTGGCGCTGGCTTCGTAC AACACGGAGATTCTTACGCTGCCCATGGCCAGCGTGGAGACGGTCGTCGACGGCGCAGGGAAGCTGGCCGTCATC GACGCCAAGGGCCGGCTACGTGGCAGCAGCAAGAGAGAGAGGAAGTGTGACAGCAACGGGCGCCTGAGGTGGAGG GAGGTCTGGAACGAGGGAACCGATGCCGTCATGGACATACCCTTGGCCGGAGTGTGTGAGGTCCTCTACGGAGAC GGGCGCGAGGAAGCCGCC |
Transcript | >Ophio5|2783 ATGTCGGCCTCATCGGAGGAGAAAGACGAGTATCTCTCGGATAACCAGTCCTCCGACTCGTCTGGTCACGAGTGG CCGGCTCGGCCCCTGTCGCAAACGTACTTCGCGCCGCCCTTCTACGGCCGCCCGCCGACGCCGCTGCCTCCTTCG CCGTCGCTGACGTCGCTCCTTCGACCGTCGCGCCCGACGACGCCAGACGCCTCGGACGATGACAACATGGCGCCG GTGCCCCGCGCGTCGCCCCAGGTGCCGACATATGAATACTACGGTTTCGTGCTGTACTTGTTCAGTAGCCTGACG TTTCTACTATGGCTCCTCTGGAGCTATCTACCGGCGCCCTTTCTGCATGGCCTGGGTATCTACTATTATCCGAAT CGGTGGTGGGCGCTGGCCATTCCTGCCTTTCTCACCATGACACTGTGCTACATCTATGTGGCGCTGGCTTCGTAC AACACGGAGATTCTTACGCTGCCCATGGCCAGCGTGGAGACGGTCGTCGACGGCGCAGGGAAGCTGGCCGTCATC GACGCCAAGGGCCGGCTACGTGGCAGCAGCAAGAGAGAGAGGAAGTGTGACAGCAACGGGCGCCTGAGGTGGAGG GAGGTCTGGAACGAGGGAACCGATGCCGTCATGGACATACCCTTGGCCGGAGTGTGTGAGGTCCTCTACGGAGAC GGGCGCGAGGAAGCCGCCTGA |
Gene | >Ophio5|2783 ATGTCGGCCTCATCGGAGGAGAAAGACGAGTATCTCTCGGATAACCAGTCCTCCGACTCGTCTGGTCACGAGTGG CCGGCTCGGCCCCTGTCGCAAACGTACTTCGCGCCGCCCTTCTACGGCCGCCCGCCGACGCCGCTGCCTCCTTCG CCGTCGCTGACGTCGCTCCTTCGACCGTCGCGCCCGACGACGCCAGACGCCTCGGACGATGACAACATGGCGCCG GTGCCCCGCGCGTCGCCCCAGGTGCCGACATATGAATACTACGGTTTCGTGCTGTACTTGTTCAGTAGCCTGACG TTTCTACTATGGCTCCTCTGGAGCTATCTACCGGCGCCCTTTCTGCATGGCCTGGGTATCTACTATTATCCGAAT CGGTGGTGGGCGCTGGCCATTCCTGCCTTTCTCACCATGACACTGTGCTACATCTATGTGGCGCTGGCTTCGTAC AACACGGAGATTCTTACGCTGCCCATGGCCAGCGTGGAGACGGTCGTCGACGGCGCAGGGAAGCTGGCCGTCATC GACGCCAAGGGCCGGCTACGTGGCAGCAGCAAGAGAGAGAGGAAGTGTGACAGCAACGGGCGCCTGAGGTGGAGG GAGGTCTGGAACGAGGGAACCGATGCCGTCATGGACATACCCTTGGCCGGAGTGTGTGAGGTCCTCTACGGAGAC GGGCGCGAGGAAGCCGCCTGA |