Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2782
Gene name
Locationscaffold_224:944..1868
Strand+
Gene length (bp)924
Transcript length (bp)678
Coding sequence length (bp)675
Protein length (aa) 225

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 25 47 22
2 88 110 22
3 123 145 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2782
MKVLLGKNRSYRLMPRAWPRTDKRLLGWLLPVELVMLVPVLVIFGIAQPDLYRTAMWRIGFENKLNSNPNMILYA
YANHRPLPDVPFIWSSTLTSFNVAISIVSLFFLLIKLIAYIMRTWYPVFAVFVNTALVALAAASLAVTLLLLIVY
LVNLAIALHATWPNPENHVCTDDDEDVATLDSKERGAWEMHSMKAPISTPYTPRTQAFYTLDRQLPLRQHDQPYA
Coding >Ophio5|2782
ATGAAGGTCCTACTCGGCAAGAATCGCTCCTACCGGCTCATGCCGCGAGCCTGGCCCCGAACCGACAAGCGCCTC
CTCGGCTGGCTCTTGCCCGTCGAACTTGTCATGTTAGTGCCCGTACTCGTCATCTTCGGCATCGCTCAGCCCGAC
CTGTACCGCACCGCCATGTGGCGCATCGGCTTCGAGAACAAGCTCAACTCCAACCCCAACATGATCCTCTACGCC
TACGCCAACCATCGGCCTCTCCCAGATGTCCCGTTCATCTGGTCTTCGACTCTGACCAGCTTCAATGTCGCCATT
TCCATCGTCTCTCTCTTTTTCCTCCTCATCAAGCTCATTGCTTACATTATGAGGACCTGGTACCCCGTCTTTGCC
GTCTTCGTCAACACTGCCCTGGTCGCCTTGGCTGCGGCATCGCTTGCCGTCACCCTTCTCTTGCTCATTGTCTAT
CTGGTCAACCTGGCCATCGCCCTGCATGCTACGTGGCCCAACCCCGAAAACCATGTGTGCACCGATGACGACGAG
GACGTAGCTACACTCGACTCCAAAGAAAGGGGCGCCTGGGAAATGCACAGCATGAAGGCTCCCATTAGCACGCCG
TACACGCCGAGAACGCAGGCATTTTATACTCTCGACCGACAGCTACCGCTACGGCAACATGATCAGCCGTATGCC
Transcript >Ophio5|2782
ATGAAGGTCCTACTCGGCAAGAATCGCTCCTACCGGCTCATGCCGCGAGCCTGGCCCCGAACCGACAAGCGCCTC
CTCGGCTGGCTCTTGCCCGTCGAACTTGTCATGTTAGTGCCCGTACTCGTCATCTTCGGCATCGCTCAGCCCGAC
CTGTACCGCACCGCCATGTGGCGCATCGGCTTCGAGAACAAGCTCAACTCCAACCCCAACATGATCCTCTACGCC
TACGCCAACCATCGGCCTCTCCCAGATGTCCCGTTCATCTGGTCTTCGACTCTGACCAGCTTCAATGTCGCCATT
TCCATCGTCTCTCTCTTTTTCCTCCTCATCAAGCTCATTGCTTACATTATGAGGACCTGGTACCCCGTCTTTGCC
GTCTTCGTCAACACTGCCCTGGTCGCCTTGGCTGCGGCATCGCTTGCCGTCACCCTTCTCTTGCTCATTGTCTAT
CTGGTCAACCTGGCCATCGCCCTGCATGCTACGTGGCCCAACCCCGAAAACCATGTGTGCACCGATGACGACGAG
GACGTAGCTACACTCGACTCCAAAGAAAGGGGCGCCTGGGAAATGCACAGCATGAAGGCTCCCATTAGCACGCCG
TACACGCCGAGAACGCAGGCATTTTATACTCTCGACCGACAGCTACCGCTACGGCAACATGATCAGCCGTATGCC
TGA
Gene >Ophio5|2782
ATGAAGGTCCTACTCGGCAAGAATCGCTCCTACCGGCTCATGCCGCGAGCCTGGCCCCGAACCGACAAGCGCCTC
CTCGGCTGGCTCTTGCCCGTCGAACTTGTCATGTTAGTGCCCGTACTCGTCATCTTCGGCATCGCTCAGCCCGAC
CTGTACCGCACCGCCATGTGGCGCATCGGCTTCGAGAACAAGCTCAACTCCAACCCCAACATGATCCTCTACGCC
TACGCCAACCATCGGCCTCTCCCAGATGTCCCGTTCATCTGGTCTTCGACGTGGGTTTCCGCCGCCCGGTCTAAG
CAGTACCGCCGACCTCTGCTAACACGAAGTGCCAGTCTGACCAGCTTCAATGTCGCCATTTCCATCGTCTCTCTC
TTTTTCCTCCTCATCAAGCTCATTGCTTACATTATGAGGACCTGGTACCCCGTCTTTGCCGTCTTCGTCAACACT
GCCCTGGTCGCCTTGTACGCCGTTAGCGTCTACGGACAAGTCGGGCCCGACTTCGCTGACGCCAGATATCACGCG
CCGGCTGCGTGGTACTTGCGCCAGGGCTGCGGTCTAGCAAAGGAGTATGGCAAGTATCAGGCTTGCCAGATTGCC
CAGGCATCGCTTGCCGTCACCCTTCTCTTGCTGTGAGTTTCCTGCGGCGACATGTTCTCGGGTCGGGCGCTGACA
AGCCGCTTTAGCATTGTCTATCTGGTCAACCTGGCCATCGCCCTGCATGCTACGTGGCCCAACCCCGAAAACCAT
GTGTGCACCGATGACGACGAGGACGTAGCTACACTCGACTCCAAAGAAAGGGGCGCCTGGGAAATGCACAGCATG
AAGGCTCCCATTAGCACGCCGTACACGCCGAGAACGCAGGCATTTTATACTCTCGACCGACAGCTACCGCTACGG
CAACATGATCAGCCGTATGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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