© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|2740 |
| Gene name | |
| Location | scaffold_22:79720..80177 |
| Strand | - |
| Gene length (bp) | 457 |
| Transcript length (bp) | 384 |
| Coding sequence length (bp) | 381 |
| Protein length (aa) | 127 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.485 | 0.5494 | 0.3003 | 0.1347 | 0.3594 | 0.032 | 0.212 | 0.2286 | 0.3399 | 0.0226 |
| Orthofinder run ID | 4 |
| Orthogroup | 15731 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|2740 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|2740 MHVAHFCQLLQWSSLFIVVQWWGDGQEEARSDARRTGAGSARDKVLPRRRVAQSGEARRGKSRSLLLKKQSDFCK RLYGHHGQTHTHMEGMQVRCRPASNALPVSYRHSHAVWLISQYALSSASPPT |
| Coding | >Ophio5|2740 ATGCATGTGGCTCATTTCTGCCAGCTTCTGCAGTGGAGTTCTCTATTTATCGTCGTCCAGTGGTGGGGAGACGGA CAGGAGGAGGCTCGGTCCGACGCTCGGAGGACTGGTGCGGGATCTGCGCGCGACAAGGTTCTTCCGCGCCGACGG GTGGCACAAAGCGGGGAAGCCAGAAGAGGAAAGTCGAGAAGTCTATTGTTGAAGAAGCAATCTGACTTCTGCAAG CGACTATACGGACACCATGGCCAGACGCATACGCATATGGAGGGTATGCAGGTCAGATGCCGCCCCGCGTCCAAC GCCCTTCCGGTTTCGTATCGTCACTCTCACGCCGTCTGGCTCATCTCCCAGTATGCCCTCAGCAGCGCGAGCCCC CCGACC |
| Transcript | >Ophio5|2740 ATGCATGTGGCTCATTTCTGCCAGCTTCTGCAGTGGAGTTCTCTATTTATCGTCGTCCAGTGGTGGGGAGACGGA CAGGAGGAGGCTCGGTCCGACGCTCGGAGGACTGGTGCGGGATCTGCGCGCGACAAGGTTCTTCCGCGCCGACGG GTGGCACAAAGCGGGGAAGCCAGAAGAGGAAAGTCGAGAAGTCTATTGTTGAAGAAGCAATCTGACTTCTGCAAG CGACTATACGGACACCATGGCCAGACGCATACGCATATGGAGGGTATGCAGGTCAGATGCCGCCCCGCGTCCAAC GCCCTTCCGGTTTCGTATCGTCACTCTCACGCCGTCTGGCTCATCTCCCAGTATGCCCTCAGCAGCGCGAGCCCC CCGACCTGA |
| Gene | >Ophio5|2740 ATGCATGTGGCTCATTTCTGCCAGCTTCTGCAGTGGAGTTCTCTATTTATCGTCGTCCAGTGGTGGGGAGACGGA CAGGAGGAGGCTCGGTCCGACGCTCGGAGGACTGGTGCGGGATCTGCGCGCGACAAGGTTCTTCCGCGCCGACGG GTGGCACAAAGCGGGGAAGCCAGAAGAGGAAAGTCGAGAAGTCTATTGTTGAAGAAGCAATCTGACTTCTGCAAG CGACTATACGGACACCATGGCCAGACGCATACGCATATGGAGGGTATGCAGGTAAGCACTGTCTGTCTATTACTA GAAATTACACATTTGAGGAGTAATGGCTCGTCTTTAATGAACCGGTCAGGTCAGATGCCGCCCCGCGTCCAACGC CCTTCCGGTTTCGTATCGTCACTCTCACGCCGTCTGGCTCATCTCCCAGTATGCCCTCAGCAGCGCGAGCCCCCC GACCTGA |