Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2720
Gene name
Locationscaffold_22:20290..22567
Strand+
Gene length (bp)2277
Transcript length (bp)2136
Coding sequence length (bp)2133
Protein length (aa) 711

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00628 PHD PHD-finger 4.7E-08 635 683

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|A8MW92|P20L1_HUMAN PHD finger protein 20-like protein 1 OS=Homo sapiens GN=PHF20L1 PE=1 SV=2 627 681 8.0E-09
sp|Q4V9H5|P20L1_RAT PHD finger protein 20-like protein 1 OS=Rattus norvegicus GN=Phf20l1 PE=1 SV=2 627 681 1.0E-08
sp|Q8CCJ9|P20L1_MOUSE PHD finger protein 20-like protein 1 OS=Mus musculus GN=Phf20l1 PE=1 SV=2 627 681 2.0E-08
sp|Q10362|SET3_SCHPO SET domain-containing protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=set3 PE=1 SV=1 634 681 8.0E-08
sp|Q9BVI0|PHF20_HUMAN PHD finger protein 20 OS=Homo sapiens GN=PHF20 PE=1 SV=2 634 683 3.0E-07
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|A8MW92|P20L1_HUMAN PHD finger protein 20-like protein 1 OS=Homo sapiens GN=PHF20L1 PE=1 SV=2 627 681 8.0E-09
sp|Q4V9H5|P20L1_RAT PHD finger protein 20-like protein 1 OS=Rattus norvegicus GN=Phf20l1 PE=1 SV=2 627 681 1.0E-08
sp|Q8CCJ9|P20L1_MOUSE PHD finger protein 20-like protein 1 OS=Mus musculus GN=Phf20l1 PE=1 SV=2 627 681 2.0E-08
sp|Q10362|SET3_SCHPO SET domain-containing protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=set3 PE=1 SV=1 634 681 8.0E-08
sp|Q9BVI0|PHF20_HUMAN PHD finger protein 20 OS=Homo sapiens GN=PHF20 PE=1 SV=2 634 683 3.0E-07
sp|Q8BLG0|PHF20_MOUSE PHD finger protein 20 OS=Mus musculus GN=Phf20 PE=1 SV=2 634 683 3.0E-07
sp|Q08923|CTI6_YEAST Histone deacetylase complex subunit CTI6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTI6 PE=1 SV=1 634 681 1.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2720
MSEHHLSASFGDPIAQPQTPRQTPTLVTFPSPSFDTPKPYQGSFVEPGGLTPRFAEEYSVFNSTPGNLRGSQGPF
AEFLPPIASTFSRGHKRLLSAESHPFDVPPHASHLATNVEKSEPTCHLPLSPPGQPPPSVSTGGIQPSPDLARSS
SLKKCRKHSDARPSQVLSPPPSSNKGGRKLAPKLTMLSDHPFCQTDLVDPAQHDMSAVLMGHSGDLFGYPLSAPA
SASSNYWDPSMSMPMDLEFNAAVHGVMHPSAPSSHRHTGSFDWNADITMFQDVSAPVQSQDNAQSPRQERVLAPK
PAASAPTANPVTLEDPFGIMNPGDGVDPGLLFGRPHTSALDSGFGSSSQPRPAERAAPSFAKPMPGELRRANSAQ
GPRSAKLTDRASIGSPIKSKARPGLSRSCSETRGRRAVGRTMQPAPMETNLSHGVLPAGCRPTGRCSPPKTVPRV
SSLASIPETSPQYRPRTSVRFTIDSRGRARAETTVVGEGPISDKRLHRSRSAAASRSWDSSDDDSSDDEPIIIPS
RNSSFNASYALPDPCKPVGSIFHTSCRSGSDRSRSNSATGPESEAETVVNDKGGDAMRELRKVVEDRQKRSRRMV
SGRPQGLISTNMASFPGGIISPTSLADSSQGNGVRCVCEDTSTDEADGFMLQCESCEMWLHGKCINVTKRSMPRV
YICCFCANTGRRCRDNGLGIAGLLSPLANKSYRTFR
Coding >Ophio5|2720
ATGAGCGAGCATCATCTCTCTGCCAGCTTTGGAGATCCAATAGCCCAGCCTCAAACGCCGAGACAAACTCCCACC
TTGGTCACCTTCCCGAGTCCGAGTTTTGACACGCCCAAGCCCTATCAGGGCTCCTTCGTCGAGCCCGGTGGCCTG
ACCCCGAGATTCGCCGAGGAATACTCCGTTTTCAATTCAACTCCAGGGAACCTCCGAGGCTCTCAGGGTCCGTTT
GCCGAGTTCCTCCCGCCCATAGCCTCGACTTTTTCGAGAGGCCATAAGCGGCTGCTATCTGCCGAGAGCCATCCC
TTCGACGTCCCCCCGCATGCGAGCCACCTGGCGACCAACGTGGAAAAGTCCGAACCGACCTGCCACTTGCCGCTT
TCGCCACCCGGGCAGCCGCCGCCGTCAGTGTCTACTGGTGGTATCCAACCGAGCCCCGACCTGGCCCGAAGCTCG
TCGTTGAAAAAGTGCCGCAAGCACTCCGACGCCCGACCATCCCAGGTCCTGTCGCCGCCGCCGTCGTCCAACAAG
GGAGGGCGCAAGCTCGCCCCCAAACTCACCATGCTCTCCGACCACCCCTTTTGCCAGACGGACCTTGTCGACCCC
GCACAGCACGACATGTCTGCTGTCCTGATGGGCCACTCGGGCGACCTGTTCGGATATCCCTTGTCTGCCCCGGCG
TCTGCGTCGTCTAATTACTGGGACCCGTCCATGTCCATGCCCATGGACCTCGAATTCAATGCCGCCGTGCACGGC
GTCATGCATCCTTCAGCCCCGTCGTCACACCGCCACACGGGATCCTTTGATTGGAACGCCGATATTACCATGTTC
CAAGACGTTTCCGCTCCGGTGCAGAGCCAGGATAACGCTCAGTCGCCTCGGCAAGAGAGGGTCCTCGCGCCGAAG
CCGGCCGCGTCGGCCCCCACGGCGAATCCCGTCACGCTCGAGGACCCGTTCGGCATAATGAATCCCGGGGACGGC
GTCGATCCGGGACTGCTATTTGGTCGCCCCCACACGTCGGCGCTGGACTCGGGCTTCGGCTCCTCGTCCCAGCCC
AGGCCCGCCGAGAGGGCGGCGCCTTCGTTTGCCAAGCCGATGCCTGGTGAGCTGAGGAGGGCCAATAGCGCCCAG
GGGCCGAGAAGTGCCAAACTGACGGACCGGGCATCGATCGGGTCGCCCATCAAGTCGAAGGCGCGCCCTGGGCTC
AGCCGAAGCTGCAGCGAGACTCGGGGCAGGAGGGCCGTCGGGCGCACGATGCAACCCGCCCCGATGGAGACGAAT
CTCAGCCACGGTGTCCTCCCGGCTGGCTGTCGGCCGACGGGGAGGTGCTCCCCGCCCAAGACGGTGCCGCGAGTG
TCGAGCCTAGCATCGATCCCGGAGACGTCGCCTCAGTACCGGCCCCGCACGTCGGTCCGGTTCACCATCGACTCG
CGTGGGCGGGCCAGGGCTGAGACAACAGTCGTCGGTGAGGGACCCATCTCAGACAAGCGTCTTCACCGCAGCAGA
AGCGCGGCGGCCAGTCGGAGCTGGGATTCGTCGGATGACGATTCGTCGGACGATGAGCCCATAATCATCCCCAGC
CGCAACAGCTCGTTCAATGCGTCGTACGCGCTGCCGGATCCTTGCAAGCCGGTGGGCTCCATCTTCCACACGTCA
TGCCGCAGCGGCAGCGACCGCAGCAGGAGCAACTCGGCGACCGGGCCCGAGAGCGAGGCGGAGACGGTGGTCAAC
GACAAGGGGGGCGACGCGATGAGGGAGCTCCGCAAGGTGGTCGAGGACCGACAAAAGCGGTCACGGCGGATGGTG
AGCGGGCGGCCTCAGGGGCTCATTTCGACGAACATGGCCAGTTTCCCGGGCGGCATCATCTCACCGACGAGCCTG
GCGGACTCGAGCCAGGGCAACGGAGTGCGGTGCGTGTGCGAGGACACGTCGACCGACGAAGCGGACGGCTTCATG
CTCCAATGCGAGTCGTGTGAGATGTGGCTTCACGGCAAATGCATCAACGTGACGAAGCGGTCGATGCCGCGCGTG
TACATCTGCTGCTTCTGCGCCAACACGGGTCGAAGATGCCGCGACAACGGGCTGGGCATAGCGGGACTGCTGTCG
CCGCTGGCGAACAAGTCGTACCGAACCTTTCGG
Transcript >Ophio5|2720
ATGAGCGAGCATCATCTCTCTGCCAGCTTTGGAGATCCAATAGCCCAGCCTCAAACGCCGAGACAAACTCCCACC
TTGGTCACCTTCCCGAGTCCGAGTTTTGACACGCCCAAGCCCTATCAGGGCTCCTTCGTCGAGCCCGGTGGCCTG
ACCCCGAGATTCGCCGAGGAATACTCCGTTTTCAATTCAACTCCAGGGAACCTCCGAGGCTCTCAGGGTCCGTTT
GCCGAGTTCCTCCCGCCCATAGCCTCGACTTTTTCGAGAGGCCATAAGCGGCTGCTATCTGCCGAGAGCCATCCC
TTCGACGTCCCCCCGCATGCGAGCCACCTGGCGACCAACGTGGAAAAGTCCGAACCGACCTGCCACTTGCCGCTT
TCGCCACCCGGGCAGCCGCCGCCGTCAGTGTCTACTGGTGGTATCCAACCGAGCCCCGACCTGGCCCGAAGCTCG
TCGTTGAAAAAGTGCCGCAAGCACTCCGACGCCCGACCATCCCAGGTCCTGTCGCCGCCGCCGTCGTCCAACAAG
GGAGGGCGCAAGCTCGCCCCCAAACTCACCATGCTCTCCGACCACCCCTTTTGCCAGACGGACCTTGTCGACCCC
GCACAGCACGACATGTCTGCTGTCCTGATGGGCCACTCGGGCGACCTGTTCGGATATCCCTTGTCTGCCCCGGCG
TCTGCGTCGTCTAATTACTGGGACCCGTCCATGTCCATGCCCATGGACCTCGAATTCAATGCCGCCGTGCACGGC
GTCATGCATCCTTCAGCCCCGTCGTCACACCGCCACACGGGATCCTTTGATTGGAACGCCGATATTACCATGTTC
CAAGACGTTTCCGCTCCGGTGCAGAGCCAGGATAACGCTCAGTCGCCTCGGCAAGAGAGGGTCCTCGCGCCGAAG
CCGGCCGCGTCGGCCCCCACGGCGAATCCCGTCACGCTCGAGGACCCGTTCGGCATAATGAATCCCGGGGACGGC
GTCGATCCGGGACTGCTATTTGGTCGCCCCCACACGTCGGCGCTGGACTCGGGCTTCGGCTCCTCGTCCCAGCCC
AGGCCCGCCGAGAGGGCGGCGCCTTCGTTTGCCAAGCCGATGCCTGGTGAGCTGAGGAGGGCCAATAGCGCCCAG
GGGCCGAGAAGTGCCAAACTGACGGACCGGGCATCGATCGGGTCGCCCATCAAGTCGAAGGCGCGCCCTGGGCTC
AGCCGAAGCTGCAGCGAGACTCGGGGCAGGAGGGCCGTCGGGCGCACGATGCAACCCGCCCCGATGGAGACGAAT
CTCAGCCACGGTGTCCTCCCGGCTGGCTGTCGGCCGACGGGGAGGTGCTCCCCGCCCAAGACGGTGCCGCGAGTG
TCGAGCCTAGCATCGATCCCGGAGACGTCGCCTCAGTACCGGCCCCGCACGTCGGTCCGGTTCACCATCGACTCG
CGTGGGCGGGCCAGGGCTGAGACAACAGTCGTCGGTGAGGGACCCATCTCAGACAAGCGTCTTCACCGCAGCAGA
AGCGCGGCGGCCAGTCGGAGCTGGGATTCGTCGGATGACGATTCGTCGGACGATGAGCCCATAATCATCCCCAGC
CGCAACAGCTCGTTCAATGCGTCGTACGCGCTGCCGGATCCTTGCAAGCCGGTGGGCTCCATCTTCCACACGTCA
TGCCGCAGCGGCAGCGACCGCAGCAGGAGCAACTCGGCGACCGGGCCCGAGAGCGAGGCGGAGACGGTGGTCAAC
GACAAGGGGGGCGACGCGATGAGGGAGCTCCGCAAGGTGGTCGAGGACCGACAAAAGCGGTCACGGCGGATGGTG
AGCGGGCGGCCTCAGGGGCTCATTTCGACGAACATGGCCAGTTTCCCGGGCGGCATCATCTCACCGACGAGCCTG
GCGGACTCGAGCCAGGGCAACGGAGTGCGGTGCGTGTGCGAGGACACGTCGACCGACGAAGCGGACGGCTTCATG
CTCCAATGCGAGTCGTGTGAGATGTGGCTTCACGGCAAATGCATCAACGTGACGAAGCGGTCGATGCCGCGCGTG
TACATCTGCTGCTTCTGCGCCAACACGGGTCGAAGATGCCGCGACAACGGGCTGGGCATAGCGGGACTGCTGTCG
CCGCTGGCGAACAAGTCGTACCGAACCTTTCGGTAG
Gene >Ophio5|2720
ATGAGCGAGCATCATCTCTCTGCCAGGCAAGTCTTCTCTCTGTCCTTTCCCTATCCCCTTCCCCGGCCTCCTCCC
CGGCTGACCTGTTTCTCCTGTCCGTTAGCTTTGGAGATCCAATAGCCCAGCCTCAAACGCCGAGACAAACTCCCA
CCTTGGTCACCTTCCCGAGTCCGAGTTTTGACACGCCCAAGCCCTATCAGGGCTCCTTCGTCGAGCCCGGTGGCC
TGACCCCGAGATTCGCCGAGGAATACTCCGTTTTCAATTCAACTCCAGGGAACCTCCGAGGCTCTCAGGGTCCGT
TTGCCGAGTTCCTCCCGCCCATAGCCTCGACTTTTTCGAGAGGCCATAAGCGGCTGCTATCTGCCGAGAGCCATC
CCTTCGACGTCCCCCCGCATGCGAGCCACCTGGCGACCAACGTGGAAAAGTCCGAACCGACCTGCCACTTGCCGC
TTTCGCCACCCGGGCAGCCGCCGCCGTCAGTGTCTACTGGTGGTATCCAACCGAGCCCCGACCTGGCCCGAAGCT
CGTCGTTGAAAAAGTGCCGCAAGCACTCCGACGCCCGACCATCCCAGGTCCTGTCGCCGCCGCCGTCGTCCAACA
AGGGAGGGCGCAAGCTCGCCCCCAAACTCACCATGCTCTCCGACCACCCCTTTTGCCAGACGGACCTTGTCGACC
CCGCACAGCACGACATGTCTGCTGTCCTGATGGGCCACTCGGGCGACCTGTTCGGATATCCCTTGTCTGCCCCGG
CGTCTGCGTCGTCTAATTACTGGGACCCGTCCATGTCCATGCCCATGGACCTCGAATTCAATGCCGCCGTGCACG
GCGTCATGCATCCTTCAGCCCCGTCGTCACACCGCCACACGGGATCCTTTGATTGGAACGCCGATATTACCATGT
TCCAAGACGTTTCCGCTCCGGTGCAGAGCCAGGATAACGCTCAGTCGCCTCGGCAAGAGAGGGTCCTCGCGCCGA
AGCCGGCCGCGTCGGCCCCCACGGCGAATCCCGTCACGCTCGAGGACCCGTTCGGCATAATGAATCCCGGGGACG
GCGTCGATCCGGGACTGCTATTTGGTCGCCCCCACACGTCGGCGCTGGACTCGGGCTTCGGCTCCTCGTCCCAGC
CCAGGCCCGCCGAGAGGGCGGCGCCTTCGTTTGCCAAGCCGATGCCTGGTGAGCTGAGGAGGGCCAATAGCGCCC
AGGGGCCGAGAAGTGCCAAACTGACGGACCGGGCATCGATCGGGTCGCCCATCAAGTCGAAGGCGCGCCCTGGGC
TCAGCCGAAGCTGCAGCGAGACTCGGGGCAGGAGGGCCGTCGGGCGCACGATGCAACCCGCCCCGATGGAGACGA
ATCTCAGCCACGGTGTCCTCCCGGCTGGCTGTCGGCCGACGGGGAGGTGCTCCCCGCCCAAGACGGTGCCGCGAG
TGTCGAGCCTAGCATCGATCCCGGAGACGTCGCCTCAGTACCGGCCCCGCACGTCGGTCCGGTTCACCATCGACT
CGCGTGGGCGGGCCAGGGCTGAGACAACAGTCGTCGGTGAGGGACCCATCTCAGACAAGCGTCTTCACCGCAGCA
GAAGCGCGGCGGCCAGTCGGAGCTGGGATTCGTCGGATGACGATTCGTCGGACGATGAGCCCATAATCATCCCCA
GCCGCAACAGCTCGTTCAATGCGTCGTACGCGCTGCCGGATCCTTGCAAGCCGGTGGGCTCCATCTTCCACACGT
CATGCCGCAGCGGCAGCGACCGCAGCAGGAGCAACTCGGCGACCGGGCCCGAGAGCGAGGCGGAGACGGTGGTCA
ACGACAAGGGGGGCGACGCGATGAGGGAGCTCCGCAAGGTGGTCGAGGACCGACAAAAGCGGTCACGGCGGATGG
TGAGCGGGCGGCCTCAGGGGCTCATTTCGACGAACATGGCCAGTTTCCCGGGCGGCATCATCTCACCGACGAGCC
TGGCGGACTCGAGCCAGGGCAACGGAGTGCGGTGCGTGTGCGAGGACACGTCGACCGACGAAGCGGACGGCTTCA
TGCTCCAATGGTGCGTTCCCACACCACCCCCAGGCTGGCCGGGGGAATGCGGCTGACGCCGGGGACGGGAGCAGC
GAGTCGTGTGAGATGTGGCTTCACGGCAAATGCATCAACGTGACGAAGCGGTCGATGCCGCGCGTGTACATCTGC
TGCTTCTGCGCCAACACGGGTCGAAGATGCCGCGACAACGGGCTGGGCATAGCGGGACTGCTGTCGCCGCTGGCG
AACAAGTCGTACCGAACCTTTCGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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