Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2719
Gene name
Locationscaffold_22:15801..17760
Strand-
Gene length (bp)1959
Transcript length (bp)1803
Coding sequence length (bp)1800
Protein length (aa) 600

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01544 CorA CorA-like Mg2+ transporter protein 9.5E-23 366 559

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9WZ31|CORA_THEMA Magnesium transport protein CorA OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=corA PE=1 SV=1 320 559 1.0E-18
sp|O31543|YFJQ_BACSU Putative metal ion transporter YfjQ OS=Bacillus subtilis (strain 168) GN=yfjQ PE=3 SV=1 284 570 1.0E-08

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0046873 metal ion transmembrane transporter activity Yes
GO:0030001 metal ion transport Yes
GO:0055085 transmembrane transport Yes
GO:0015075 ion transmembrane transporter activity No
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0006810 transport No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0022857 transmembrane transporter activity No
GO:0110165 cellular anatomical entity No
GO:0009987 cellular process No
GO:0005575 cellular_component No
GO:0008324 cation transmembrane transporter activity No
GO:0006811 ion transport No
GO:0006812 cation transport No
GO:0015318 inorganic molecular entity transmembrane transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 509 531 22
2 541 560 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2719
MEDQVQAAAASSSSTPGRLSGTAFPPGRMGSTASTIGHLSPGKKRSPLSDTDLRRSKSRRRGSLGIAAMFRTVDD
CSELLLDDDSAPPGWQPGAEPGYDPELPDGGHASMPTLSARCNITVIDFSPDRMVQRHFDNEAFIAFLEKPQDKW
ATCRWINVNGLSWDVIQAVGSKKGLHKLALEDVMNLRNRTKADWYPSHAYIVLTLLKLVHLVDRSDHSSSSDDAQ
DTDPDPSLLRRLFRRGHRALRRRRDRTRSPTTPDTEPDGVRAAEKGAIDYGSLTTTTTTARSLPRSLHRFHASGS
EARTSLMERESPLGPRNMAVAAEQVSIFLTGDNTAVSFFETSAADVERPIVTRLSTAGTILRASCDASLLVQALL
DAIVDLALPLTTVYSDLLGDLELDVLTAPSIRQSRSLYLCIAEINKMLRFLQPVDGLVNALRDHRSPNRAGRQLG
DPAAESVIVSSVTCTYLGDVLDHCIVICDALQQLKQSSEDLIGLIFNTISATQNESMRQLTTVTIIFLPLTFITG
FFGQNFNNFPELHHGIWYFWACAVPTAVATVLILMHDMIYSWFVRLFRRKRILSLRRARAAPWPKRRRKLSTSRQ
Coding >Ophio5|2719
ATGGAGGACCAAGTCCAAGCGGCGGCAGCGTCGTCGTCGTCTACGCCCGGACGCTTGAGCGGCACCGCTTTCCCC
CCGGGACGCATGGGCAGCACCGCCTCGACAATCGGCCATCTATCACCTGGCAAGAAGCGCAGCCCGCTCTCCGAC
ACGGATCTCCGACGATCCAAGTCCAGGAGAAGAGGGAGCCTCGGGATCGCTGCCATGTTCCGCACCGTCGACGAT
TGCAGTGAGCTGCTGCTGGATGATGATTCCGCTCCGCCGGGCTGGCAGCCTGGTGCTGAACCGGGTTACGATCCT
GAACTGCCGGATGGCGGTCATGCTTCGATGCCGACGCTCAGTGCTCGCTGTAACATCACCGTCATTGACTTTTCG
CCTGATCGCATGGTGCAGCGACATTTCGATAATGAGGCTTTTATCGCCTTTCTCGAGAAGCCGCAGGACAAGTGG
GCTACTTGTAGATGGATCAACGTCAATGGCTTGAGTTGGGATGTCATTCAGGCGGTTGGCTCGAAAAAGGGGCTT
CACAAGCTTGCGCTCGAAGACGTCATGAACTTGCGAAACCGCACCAAAGCAGACTGGTATCCGAGCCACGCCTAC
ATCGTCCTCACCCTCCTCAAGCTCGTCCACCTCGTCGACCGCTCCGACCACAGCTCCAGCTCCGACGACGCCCAA
GACACTGACCCAGACCCAAGCCTCCTCCGACGGCTCTTTCGACGAGGTCATCGCGCTCTCCGCAGACGACGGGAC
CGGACCCGCAGTCCAACCACCCCCGATACCGAGCCCGATGGCGTCCGGGCGGCGGAAAAGGGGGCAATCGATTAC
GGCTCTCTCACGACGACGACGACGACGGCTAGGTCGTTGCCTAGGTCGTTGCATCGCTTTCATGCTTCGGGTAGT
GAGGCCCGTACTTCACTCATGGAGCGCGAGTCGCCTCTCGGGCCCAGAAACATGGCCGTCGCCGCGGAGCAGGTC
TCCATCTTCCTTACCGGCGACAACACGGCCGTCTCCTTCTTCGAGACGTCGGCTGCTGACGTGGAGAGGCCGATC
GTTACGCGTCTGAGTACAGCGGGCACCATTCTTCGCGCATCGTGCGATGCCTCGCTTCTCGTTCAGGCCCTTCTC
GATGCCATCGTCGACCTCGCCTTACCCCTGACGACCGTCTACTCCGACCTCCTGGGCGATCTCGAGCTCGACGTG
CTGACGGCGCCCTCCATCCGGCAGAGTCGATCGCTCTATCTTTGCATCGCCGAGATCAACAAGATGCTACGCTTC
CTCCAGCCCGTCGACGGTCTGGTAAACGCCCTGCGCGATCATCGGTCGCCGAACCGTGCCGGTCGTCAGCTCGGT
GATCCGGCCGCCGAGAGTGTCATCGTCTCCTCTGTCACCTGCACCTATCTGGGCGACGTCCTCGATCACTGCATC
GTCATCTGCGATGCCCTGCAGCAGCTGAAGCAGTCGAGCGAGGATCTCATCGGCCTCATCTTCAACACCATTTCC
GCCACCCAGAACGAGTCGATGCGCCAGCTCACCACCGTCACCATCATCTTCCTGCCCCTGACCTTCATCACCGGC
TTCTTTGGCCAGAACTTCAACAACTTTCCCGAGCTGCACCACGGCATCTGGTACTTCTGGGCCTGTGCCGTGCCG
ACGGCCGTGGCCACCGTGCTGATCCTCATGCACGACATGATATACTCGTGGTTTGTCCGTCTGTTCCGCCGCAAG
AGGATTCTTAGTCTTCGCCGGGCCAGGGCCGCGCCGTGGCCCAAGAGGAGGCGCAAACTCAGCACATCTCGCCAG
Transcript >Ophio5|2719
ATGGAGGACCAAGTCCAAGCGGCGGCAGCGTCGTCGTCGTCTACGCCCGGACGCTTGAGCGGCACCGCTTTCCCC
CCGGGACGCATGGGCAGCACCGCCTCGACAATCGGCCATCTATCACCTGGCAAGAAGCGCAGCCCGCTCTCCGAC
ACGGATCTCCGACGATCCAAGTCCAGGAGAAGAGGGAGCCTCGGGATCGCTGCCATGTTCCGCACCGTCGACGAT
TGCAGTGAGCTGCTGCTGGATGATGATTCCGCTCCGCCGGGCTGGCAGCCTGGTGCTGAACCGGGTTACGATCCT
GAACTGCCGGATGGCGGTCATGCTTCGATGCCGACGCTCAGTGCTCGCTGTAACATCACCGTCATTGACTTTTCG
CCTGATCGCATGGTGCAGCGACATTTCGATAATGAGGCTTTTATCGCCTTTCTCGAGAAGCCGCAGGACAAGTGG
GCTACTTGTAGATGGATCAACGTCAATGGCTTGAGTTGGGATGTCATTCAGGCGGTTGGCTCGAAAAAGGGGCTT
CACAAGCTTGCGCTCGAAGACGTCATGAACTTGCGAAACCGCACCAAAGCAGACTGGTATCCGAGCCACGCCTAC
ATCGTCCTCACCCTCCTCAAGCTCGTCCACCTCGTCGACCGCTCCGACCACAGCTCCAGCTCCGACGACGCCCAA
GACACTGACCCAGACCCAAGCCTCCTCCGACGGCTCTTTCGACGAGGTCATCGCGCTCTCCGCAGACGACGGGAC
CGGACCCGCAGTCCAACCACCCCCGATACCGAGCCCGATGGCGTCCGGGCGGCGGAAAAGGGGGCAATCGATTAC
GGCTCTCTCACGACGACGACGACGACGGCTAGGTCGTTGCCTAGGTCGTTGCATCGCTTTCATGCTTCGGGTAGT
GAGGCCCGTACTTCACTCATGGAGCGCGAGTCGCCTCTCGGGCCCAGAAACATGGCCGTCGCCGCGGAGCAGGTC
TCCATCTTCCTTACCGGCGACAACACGGCCGTCTCCTTCTTCGAGACGTCGGCTGCTGACGTGGAGAGGCCGATC
GTTACGCGTCTGAGTACAGCGGGCACCATTCTTCGCGCATCGTGCGATGCCTCGCTTCTCGTTCAGGCCCTTCTC
GATGCCATCGTCGACCTCGCCTTACCCCTGACGACCGTCTACTCCGACCTCCTGGGCGATCTCGAGCTCGACGTG
CTGACGGCGCCCTCCATCCGGCAGAGTCGATCGCTCTATCTTTGCATCGCCGAGATCAACAAGATGCTACGCTTC
CTCCAGCCCGTCGACGGTCTGGTAAACGCCCTGCGCGATCATCGGTCGCCGAACCGTGCCGGTCGTCAGCTCGGT
GATCCGGCCGCCGAGAGTGTCATCGTCTCCTCTGTCACCTGCACCTATCTGGGCGACGTCCTCGATCACTGCATC
GTCATCTGCGATGCCCTGCAGCAGCTGAAGCAGTCGAGCGAGGATCTCATCGGCCTCATCTTCAACACCATTTCC
GCCACCCAGAACGAGTCGATGCGCCAGCTCACCACCGTCACCATCATCTTCCTGCCCCTGACCTTCATCACCGGC
TTCTTTGGCCAGAACTTCAACAACTTTCCCGAGCTGCACCACGGCATCTGGTACTTCTGGGCCTGTGCCGTGCCG
ACGGCCGTGGCCACCGTGCTGATCCTCATGCACGACATGATATACTCGTGGTTTGTCCGTCTGTTCCGCCGCAAG
AGGATTCTTAGTCTTCGCCGGGCCAGGGCCGCGCCGTGGCCCAAGAGGAGGCGCAAACTCAGCACATCTCGCCAG
TGA
Gene >Ophio5|2719
ATGGAGGACCAAGTCCAAGCGGCGGCAGCGTCGTCGTCGTCTACGCCCGGACGCTTGAGCGGCACCGCTTTCCCC
CCGGGACGCATGGGCAGCACCGCCTCGACAATCGGCCATCTATCACCTGGCAAGAAGCGCAGCCCGCTCTCCGAC
ACGGATCTCCGACGATCCAAGTCCAGGAGAAGAGGGAGCCTCGGGATCGCTGCCATGTTCCGCACCGTCGACGAT
TGCAGTGAGCTGCTGCTGGATGATGATTCCGCTCCGCCGGGCTGGCAGCCTGGTGCTGAACCGGGTTACGATCCT
GAACTGCCGGATGGCGGTCATGCTTCGATGCCGACGCTCAGTGCTCGCTGTAACATCACCGTCATTGACTTTTCG
CCTGATCGCATGGTGCAGCGACATTTCGATAATGAGGCTTTTATCGCCTTTCTCGAGAAGCCGCAGGACAAGTGG
GCTACTTGTAGATGGATCAACGTCAATGGCTTGAGTTGGGATGTCATTCAGGCGGTTGGCTCGAAAAAGGGGCTT
CACAAGCTTGCGCTCGAAGACGTCATGAACTTGCGAAACCGCACCAAAGCAGACTGGTTCGTGCCAAGATGGGAC
CGAAATCGAATCGTCTCTTGTTCTCTAACCAAAAAGAAATATATATTTATATATATATTTACATGGCAGGTATCC
GAGCCACGCCTACATCGTCCTCACCCTCCTCAAGCTCGTCCACCTCGTCGACCGCTCCGACCACAGCTCCAGCTC
CGACGACGCCCAAGACACTGACCCAGACCCAAGCCTCCTCCGACGGCTCTTTCGACGAGGTCATCGCGCTCTCCG
CAGACGACGGGACCGGACCCGCAGTCCAACCACCCCCGATACCGAGCCCGATGGCGTCCGGGCGGCGGAAAAGGG
GGCAATCGATTACGGCTCTCTCACGACGACGACGACGACGGCTAGGTCGTTGCCTAGGTCGTTGCATCGCTTTCA
TGCTTCGGGTAGTGAGGCCCGTACTTCACTCATGGAGCGCGAGTCGCCTCTCGGGCCCAGAAACATGGCCGTCGC
CGCGGAGCAGGTCTCCATCTTCCTTACCGGCGACAACACGGCCGTCTCCTTCTTCGAGACGTCGGCTGCTGACGT
GGAGAGGCCGATCGTTACGCGTCTGAGTACAGCGGGCACCATTCTTCGCGCATCGTGCGATGCCTCGCTTCTCGT
TCAGGCCCTTCTCGATGCCATCGTCGACCTCGCCTTACCCCTGACGACCGTCTACTCCGACCTCCTGGGCGATCT
CGAGCTCGACGTGCTGACGGCGCCCTCCATCCGGCAGAGTCGATCGCTCTATCTTTGCATCGCCGAGATCAACAA
GATGCTACGCTTCCTCCAGCCCGTCGACGGTCTGGTAAACGCCCTGCGCGATCATCGGTCGCCGAACCGTGCCGG
TCGTCAGCTCGGTGATCCGGCCGCCGAGAGTGTCATCGTCTCCTCTGTCACCTGCACCTATCTGGGCGACGTCCT
CGATCACTGCATCGTCATCTGCGATGCCCTGCAGCAGCTGAAGCAGTCGAGCGAGGATCTCATCGGCCTCATCTT
CAACACCATTTCCGCCACCCAGAACGAGTCGATGCGCCAGCTCACCACCGTCACCATCATCTTCCTGCCCCTGAC
CTTCATCACCGGCTTCTTTGGCCAGAACTTCAACAACTTTCCCGAGCTGCACCACGGCATCTGGTACTTGTAAGT
TGACCCTACCCCTGCCCCCTGCCCTCCATCTCTTCTCGGTCCCTGACCCCCTGACCCCCTAGCTGGGCCTGTGCC
GTGCCGACGGCCGTGGCCACCGTGCTGATCCTCATGCACGACATGATATACTCGTGGTTTGTCCGTCTGTTCCGC
CGCAAGAGGATTCTTAGTCTTCGCCGGGCCAGGGCCGCGCCGTGGCCCAAGAGGAGGCGCAAACTCAGCACATCT
CGCCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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