Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|2697
Gene name
Location	scaffold_218:24032..26020
Strand	-
Gene length (bp)	1988
Transcript length (bp)	1740
Coding sequence length (bp)	1737
Protein length (aa)	579

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00628	PHD	PHD-finger	4.5E-09	135	174

Swissprot hits

[Show all]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q1MTR4\|CTI6_SCHPO	Putative histone deacetylase complex subunit cti6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cti6 PE=1 SV=1	102	306	7.0E-21
sp\|Q10362\|SET3_SCHPO	SET domain-containing protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=set3 PE=1 SV=1	134	182	3.0E-08
sp\|P36124\|SET3_YEAST	SET domain-containing protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SET3 PE=1 SV=1	119	172	5.0E-07
sp\|A8MW92\|P20L1_HUMAN	PHD finger protein 20-like protein 1 OS=Homo sapiens GN=PHF20L1 PE=1 SV=2	93	173	1.0E-06
sp\|Q4V9H5\|P20L1_RAT	PHD finger protein 20-like protein 1 OS=Rattus norvegicus GN=Phf20l1 PE=1 SV=2	93	173	1.0E-06

[Show all]

[Show less]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q1MTR4\|CTI6_SCHPO	Putative histone deacetylase complex subunit cti6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cti6 PE=1 SV=1	102	306	7.0E-21
sp\|Q10362\|SET3_SCHPO	SET domain-containing protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=set3 PE=1 SV=1	134	182	3.0E-08
sp\|P36124\|SET3_YEAST	SET domain-containing protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SET3 PE=1 SV=1	119	172	5.0E-07
sp\|A8MW92\|P20L1_HUMAN	PHD finger protein 20-like protein 1 OS=Homo sapiens GN=PHF20L1 PE=1 SV=2	93	173	1.0E-06
sp\|Q4V9H5\|P20L1_RAT	PHD finger protein 20-like protein 1 OS=Rattus norvegicus GN=Phf20l1 PE=1 SV=2	93	173	1.0E-06
sp\|Q8CCJ9\|P20L1_MOUSE	PHD finger protein 20-like protein 1 OS=Mus musculus GN=Phf20l1 PE=1 SV=2	93	173	2.0E-06

[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|2697 MAPPSPRRSSRARAPNSQSQQSSASSATSIRLDRTTRSLNKTSPGKSTPSASLSSEPLDELDDSILGRRRKRGQE DEVEKNNKVERTVMAHGSDDLPDEEDEAVRCICGSEDYPGRPPVEGPDADFFAGIELTEDVTGFFVQCDICKVWQ HGACVGIFSAESSPDEYFCEQCRKDLHKIHAASNGQKYSKYLPLHRPSRATSRSTSITKDSARSPKNGSSKTPRQ NSASQASKRRSTMNSRDAAYDDELLRRVIEASKEDLVHEAIESSSRRVKRGRSGSEENNGSAKRQRTGSRSVSPP AEQPEASKGDGTDDEAGTRNGAKKSKNSKTQRDKSEKEEKERHRQEAANKRRGRAERRRVEDPDLSEEMPLAALN HTQNKAGEPTTTEDNTPTTVQRPGTPPTSHPAASSSHKRGARSNHKKGKGKNQHTKDRDPDKEASPARSVSRETV KNADESTSNVKSSTGDSKHGNSKNNKQASGGKMSMIDMKRRVAAIMEFISRTQVDMAAENGGSSNSDQDSPAKSR PIGEGVAASNGRSSVASSSSSSSSSDGDRFRELSCIEMMDVLTRDMVKWQNHYA
Coding	>Ophio5\|2697 ATGGCACCGCCCTCGCCACGGCGATCCTCGAGAGCTCGCGCGCCAAACTCTCAGTCTCAACAATCTTCGGCCTCT TCGGCCACCTCGATCCGGCTCGATCGCACCACCAGGTCGCTCAACAAGACCTCGCCGGGAAAATCCACCCCCAGC GCCTCGCTTTCTTCCGAGCCCCTCGACGAGCTCGACGACAGCATCCTGGGCCGTCGGCGCAAGCGCGGCCAAGAG GACGAAGTGGAAAAAAACAACAAGGTAGAACGCACCGTCATGGCCCACGGAAGTGACGATCTTCCGGACGAGGAG GACGAGGCGGTCCGCTGCATCTGCGGCTCCGAGGACTATCCGGGCCGTCCTCCCGTCGAGGGCCCCGACGCCGAC TTCTTTGCCGGGATCGAGCTCACCGAAGACGTTACTGGCTTCTTCGTGCAGTGCGACATTTGCAAAGTATGGCAA CACGGTGCCTGCGTGGGCATCTTCAGCGCCGAGAGCTCTCCCGATGAGTACTTTTGCGAGCAGTGTCGCAAGGAC CTGCACAAAATACACGCGGCCAGCAATGGACAAAAATATTCAAAGTACCTGCCTCTCCATCGTCCCTCGCGGGCG ACATCGCGGTCAACGTCCATCACCAAGGATAGCGCTCGATCCCCCAAGAACGGGTCCTCCAAGACACCTCGTCAG AACTCGGCCTCCCAAGCGTCGAAGCGTCGATCAACGATGAACAGTCGCGACGCGGCCTACGACGACGAGCTGCTG CGTCGCGTGATAGAGGCCAGCAAGGAGGACCTTGTACACGAGGCAATCGAGAGCTCTTCCCGACGAGTCAAACGC GGCCGCAGCGGCAGCGAAGAGAACAATGGTAGCGCGAAAAGGCAGCGCACTGGCTCTCGGTCGGTCTCTCCGCCG GCGGAACAGCCCGAGGCCAGCAAAGGCGATGGCACAGATGACGAGGCCGGTACGCGCAACGGAGCCAAGAAGTCC AAAAACAGCAAAACCCAGCGCGATAAATCGGAAAAGGAGGAAAAGGAACGTCATAGACAAGAGGCAGCAAACAAG CGCAGAGGCCGTGCCGAGCGCCGACGGGTAGAAGACCCTGACCTCTCGGAAGAAATGCCGTTGGCAGCCCTAAAT CACACGCAAAATAAGGCTGGCGAACCGACGACAACAGAGGATAACACGCCGACGACGGTGCAGCGTCCCGGGACG CCGCCTACGAGTCATCCCGCAGCATCCAGCTCCCACAAGAGAGGGGCCCGAAGCAACCATAAGAAGGGCAAAGGG AAGAACCAGCACACAAAAGACCGCGACCCAGACAAGGAGGCGTCACCGGCGCGGTCTGTGTCGAGAGAAACGGTG AAGAATGCAGACGAGTCGACGAGCAACGTCAAGTCGTCAACCGGCGACAGTAAACACGGCAACTCTAAAAACAAC AAGCAGGCATCGGGCGGCAAGATGAGCATGATTGACATGAAGCGGCGCGTCGCCGCCATCATGGAGTTCATCTCC CGCACGCAGGTGGACATGGCTGCCGAAAACGGAGGCTCCAGCAACAGCGACCAGGACTCGCCCGCCAAGTCCCGG CCCATCGGCGAAGGGGTAGCGGCCTCGAACGGTCGAAGCTCGGTGGCGTCGTCGTCGTCGTCGTCGTCGTCGTCG GACGGGGACAGGTTTCGGGAGCTCAGCTGCATCGAGATGATGGACGTCTTGACGCGTGACATGGTCAAGTGGCAG AATCACTACGCT
Transcript	>Ophio5\|2697 ATGGCACCGCCCTCGCCACGGCGATCCTCGAGAGCTCGCGCGCCAAACTCTCAGTCTCAACAATCTTCGGCCTCT TCGGCCACCTCGATCCGGCTCGATCGCACCACCAGGTCGCTCAACAAGACCTCGCCGGGAAAATCCACCCCCAGC GCCTCGCTTTCTTCCGAGCCCCTCGACGAGCTCGACGACAGCATCCTGGGCCGTCGGCGCAAGCGCGGCCAAGAG GACGAAGTGGAAAAAAACAACAAGGTAGAACGCACCGTCATGGCCCACGGAAGTGACGATCTTCCGGACGAGGAG GACGAGGCGGTCCGCTGCATCTGCGGCTCCGAGGACTATCCGGGCCGTCCTCCCGTCGAGGGCCCCGACGCCGAC TTCTTTGCCGGGATCGAGCTCACCGAAGACGTTACTGGCTTCTTCGTGCAGTGCGACATTTGCAAAGTATGGCAA CACGGTGCCTGCGTGGGCATCTTCAGCGCCGAGAGCTCTCCCGATGAGTACTTTTGCGAGCAGTGTCGCAAGGAC CTGCACAAAATACACGCGGCCAGCAATGGACAAAAATATTCAAAGTACCTGCCTCTCCATCGTCCCTCGCGGGCG ACATCGCGGTCAACGTCCATCACCAAGGATAGCGCTCGATCCCCCAAGAACGGGTCCTCCAAGACACCTCGTCAG AACTCGGCCTCCCAAGCGTCGAAGCGTCGATCAACGATGAACAGTCGCGACGCGGCCTACGACGACGAGCTGCTG CGTCGCGTGATAGAGGCCAGCAAGGAGGACCTTGTACACGAGGCAATCGAGAGCTCTTCCCGACGAGTCAAACGC GGCCGCAGCGGCAGCGAAGAGAACAATGGTAGCGCGAAAAGGCAGCGCACTGGCTCTCGGTCGGTCTCTCCGCCG GCGGAACAGCCCGAGGCCAGCAAAGGCGATGGCACAGATGACGAGGCCGGTACGCGCAACGGAGCCAAGAAGTCC AAAAACAGCAAAACCCAGCGCGATAAATCGGAAAAGGAGGAAAAGGAACGTCATAGACAAGAGGCAGCAAACAAG CGCAGAGGCCGTGCCGAGCGCCGACGGGTAGAAGACCCTGACCTCTCGGAAGAAATGCCGTTGGCAGCCCTAAAT CACACGCAAAATAAGGCTGGCGAACCGACGACAACAGAGGATAACACGCCGACGACGGTGCAGCGTCCCGGGACG CCGCCTACGAGTCATCCCGCAGCATCCAGCTCCCACAAGAGAGGGGCCCGAAGCAACCATAAGAAGGGCAAAGGG AAGAACCAGCACACAAAAGACCGCGACCCAGACAAGGAGGCGTCACCGGCGCGGTCTGTGTCGAGAGAAACGGTG AAGAATGCAGACGAGTCGACGAGCAACGTCAAGTCGTCAACCGGCGACAGTAAACACGGCAACTCTAAAAACAAC AAGCAGGCATCGGGCGGCAAGATGAGCATGATTGACATGAAGCGGCGCGTCGCCGCCATCATGGAGTTCATCTCC CGCACGCAGGTGGACATGGCTGCCGAAAACGGAGGCTCCAGCAACAGCGACCAGGACTCGCCCGCCAAGTCCCGG CCCATCGGCGAAGGGGTAGCGGCCTCGAACGGTCGAAGCTCGGTGGCGTCGTCGTCGTCGTCGTCGTCGTCGTCG GACGGGGACAGGTTTCGGGAGCTCAGCTGCATCGAGATGATGGACGTCTTGACGCGTGACATGGTCAAGTGGCAG AATCACTACGCTTGA
Gene	>Ophio5\|2697 ATGGCACCGCCCTCGCCACGGCGATCCTCGAGAGCTCGCGCGCCAAACTCTCAGTCTCAACAATCTTCGGCCTCT TCGGCCACCTCGATCCGGCTCGATCGCACCACCAGGTCGCTCAACAAGACCTCGCCGGGAAAATCCACCCCCAGC GCCTCGCTTTCTTCCGAGCCCCTCGACGAGCTCGACGACAGCATCCTGGGCCGTCGGCGCAAGCGCGGCCAAGAG GACGAAGTGGAAAAAAACAACAAGGTAGAACGCACCGTCATGGCCCACGGAAGTGACGATCTTCCGGACGAGGAG GACGAGGCGGTCCGCTGCATCTGCGGCTCCGAGGACTATCCGGGCCGTCCTCCCGTCGAGGGCCCCGACGCCGAC TTCTTTGCCGGGATCGAGCTCACCGAAGACGTTACTGGCTTCTTCGTGCAGTGCGACATTTGCAAAGTATGGCAA CACGGTGCCTGCGTGGGCATCTTCAGCGCCGAGAGCTCTCCCGATGAGTACTTTTGCGAGCAGTGTCGCAAGGAC CTGCACAAAATACACGCGGCCAGCAATGGGTATGAGGCCTTCCTTGCTTGACGGGTTCGGGTTCGCCTTCCTGGC GTCGTTTGCCAAGGAAATGTCGGAGCCGGTTGTCGACTGCTTGCCTCTTGTCGGTTGTTTGCTGACCGTGCCCCA TCCGCATCAGACAAAAATATTCAAAGTACCTGCCTCTCCATCGTCCCTCGCGGGCGACATCGCGGTCAACGTCCA TCACCAAGGATAGCGCTCGATCCCCCAAGAACGGGTCCTCCAAGACACCTCGTCAGAACTCGGCCTCCCAAGCGT CGAAGCGTCGATCAACGATGAACAGTCGCGACGCGGCCTACGACGACGAGCTGCTGCGTCGCGTGATAGAGGCCA GCAAGGAGGACCTTGTACACGAGGCAATCGAGAGCTCTTCCCGACGAGTCAAACGCGGCCGCAGCGGCAGCGAAG AGTCGGTCGCCCTCGTTCTAGATTTTGGCGCGTTAGTGGGCGTTGCTGACACAGTGCAGGAACAATGGTAGCGCG AAAAGGCAGCGCACTGGCTCTCGGTCGGTCTCTCCGCCGGCGGAACAGCCCGAGGCCAGCAAAGGCGATGGCACA GATGACGAGGCCGGTACGCGCAACGGAGCCAAGAAGTCCAAAAACAGCAAAACCCAGCGCGATAAATCGGAAAAG GAGGAAAAGGAACGTCATAGACAAGAGGCAGCAAACAAGCGCAGAGGCCGTGCCGAGCGCCGACGGGTAGAAGGT GAGTGAAAGGTGGACGGCGCCTCTCCCAAGGCTGCAGCTGACTGGGTACCTTTTCAGACCCTGACCTCTCGGAAG AAATGCCGTTGGCAGCCCTAAATCACACGCAAAATAAGGCTGGCGAACCGACGACAACAGAGGATAACACGCCGA CGACGGTGCAGCGTCCCGGGACGCCGCCTACGAGTCATCCCGCAGCATCCAGCTCCCACAAGAGAGGGGCCCGAA GCAACCATAAGAAGGGCAAAGGGAAGAACCAGCACACAAAAGACCGCGACCCAGACAAGGAGGCGTCACCGGCGC GGTCTGTGTCGAGAGAAACGGTGAAGAATGCAGACGAGTCGACGAGCAACGTCAAGTCGTCAACCGGCGACAGTA AACACGGCAACTCTAAAAACAACAAGCAGGCATCGGGCGGCAAGATGAGCATGATTGACATGAAGCGGCGCGTCG CCGCCATCATGGAGTTCATCTCCCGCACGCAGGTGGACATGGCTGCCGAAAACGGAGGCTCCAGCAACAGCGACC AGGACTCGCCCGCCAAGTCCCGGCCCATCGGCGAAGGGGTAGCGGCCTCGAACGGTCGAAGCTCGGTGGCGTCGT CGTCGTCGTCGTCGTCGTCGTCGGACGGGGACAGGTTTCGGGAGCTCAGCTGCATCGAGATGATGGACGTCTTGA CGCGTGACATGGTCAAGTGGCAGAATCACTACGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail