Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|2678
Gene name
Location	scaffold_217:9226..10578
Strand	-
Gene length (bp)	1352
Transcript length (bp)	1083
Coding sequence length (bp)	1080
Protein length (aa)	360

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01758	SBF	Sodium Bile acid symporter family	1.7E-34	86	262

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q8NQC8\|ACR3_CORGL	Arsenical-resistance protein Acr3 OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=acr3 PE=1 SV=2	25	356	2.0E-89
sp\|P45946\|ARSB_BACSU	Arsenite resistance protein ArsB OS=Bacillus subtilis (strain 168) GN=arsB PE=3 SV=2	39	347	1.0E-72
sp\|Q06598\|ARR3_YEAST	Arsenical-resistance protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARR3 PE=1 SV=1	18	360	3.0E-70
sp\|P74311\|Y944_SYNY3	Uncharacterized transporter slr0944 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0944 PE=3 SV=1	32	347	1.0E-40
sp\|A6TP80\|ACR3_ALKMQ	Arsenical-resistance protein Acr3 OS=Alkaliphilus metalliredigens (strain QYMF) GN=acr3 PE=1 SV=1	39	332	2.0E-29

GO

GO Term	Description	Terminal node
GO:0016020	membrane	Yes
GO:0110165	cellular anatomical entity	No
GO:0005575	cellular_component	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 19	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	47	66	19
2	76	98	22
3	118	140	22
4	160	182	22
5	195	217	22
6	232	254	22
7	267	289	22
8	328	350	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|2678 MHPAGLSTVLEEVGSSRADGENPENSASNRARVSQSAFKHLGLLDRFLPLCIFLAMAIGIILANLVPEAGPSLQR GRFVGVSVPIAVGLLVMMYPILCRVRYESLHQLLSRRTMWKQIAFSLFVNWIVAPFLMLALAWAFLPDKSALRTG LILVGLGRCIAMVLIWNGMVLFAPLAVFFLRVISGELGTTLGIPYEVVATSVAVFLGIPLGAAVVTRFVLRAVAG GDWYQRVFLRFASPWSLIGLLYTILILFASQGRQVVHQIVSVLRVAAPLMVYFVLIFFLTLCISRLLGFKFPFLV AQSFTAASNNLELAIAVAIATFDPDSDQALASTVGPLIEVPVLMGLVYAVRCMATRWRWN
Coding	>Ophio5\|2678 ATGCACCCCGCTGGCCTCTCTACGGTGCTGGAGGAAGTAGGCAGCAGCCGAGCAGACGGAGAGAATCCGGAAAAC TCGGCAAGCAATAGAGCCCGCGTGTCACAGTCTGCGTTCAAGCACTTGGGTCTTCTCGACCGTTTTCTGCCGCTG TGCATCTTCTTAGCCATGGCCATCGGCATCATTCTCGCCAACTTGGTCCCGGAAGCGGGCCCTTCCCTGCAGAGG GGTCGATTCGTCGGAGTCTCGGTGCCCATTGCCGTTGGTCTGCTCGTCATGATGTATCCGATCCTATGCAGGGTG CGCTATGAATCGCTGCACCAACTCCTTTCGCGGAGGACAATGTGGAAGCAGATAGCCTTCAGTCTATTCGTCAAC TGGATCGTTGCCCCTTTTCTCATGCTTGCCCTGGCCTGGGCATTTCTTCCGGACAAGAGTGCCCTTCGCACCGGA CTTATACTCGTCGGACTGGGAAGGTGTATTGCCATGGTGCTTATCTGGAACGGGATGGTGCTTTTTGCCCCGCTT GCTGTCTTCTTCCTCCGCGTCATCAGCGGCGAGTTGGGTACTACGCTTGGCATCCCCTACGAGGTTGTCGCCACC AGTGTAGCAGTCTTTCTCGGCATCCCATTGGGGGCGGCCGTTGTGACGCGGTTTGTGCTCCGCGCGGTGGCAGGA GGTGATTGGTATCAGCGCGTCTTCCTCCGCTTCGCGTCGCCGTGGTCGCTCATTGGCCTGCTGTACACCATTCTC ATTCTCTTCGCCTCCCAAGGCCGCCAGGTTGTACACCAGATCGTATCGGTGCTTCGAGTCGCTGCGCCGCTGATG GTGTACTTTGTGCTTATATTCTTTCTGACCCTTTGCATCAGCCGCCTTCTCGGCTTCAAGTTTCCTTTTCTCGTG GCACAGAGTTTCACCGCTGCCAGCAATAACTTGGAACTGGCTATCGCGGTGGCCATAGCGACCTTCGACCCCGAT AGCGACCAGGCACTGGCATCTACCGTCGGTCCGCTGATTGAGGTTCCCGTGCTGATGGGCTTGGTATACGCCGTT CGATGCATGGCAACTAGGTGGCGGTGGAAT
Transcript	>Ophio5\|2678 ATGCACCCCGCTGGCCTCTCTACGGTGCTGGAGGAAGTAGGCAGCAGCCGAGCAGACGGAGAGAATCCGGAAAAC TCGGCAAGCAATAGAGCCCGCGTGTCACAGTCTGCGTTCAAGCACTTGGGTCTTCTCGACCGTTTTCTGCCGCTG TGCATCTTCTTAGCCATGGCCATCGGCATCATTCTCGCCAACTTGGTCCCGGAAGCGGGCCCTTCCCTGCAGAGG GGTCGATTCGTCGGAGTCTCGGTGCCCATTGCCGTTGGTCTGCTCGTCATGATGTATCCGATCCTATGCAGGGTG CGCTATGAATCGCTGCACCAACTCCTTTCGCGGAGGACAATGTGGAAGCAGATAGCCTTCAGTCTATTCGTCAAC TGGATCGTTGCCCCTTTTCTCATGCTTGCCCTGGCCTGGGCATTTCTTCCGGACAAGAGTGCCCTTCGCACCGGA CTTATACTCGTCGGACTGGGAAGGTGTATTGCCATGGTGCTTATCTGGAACGGGATGGTGCTTTTTGCCCCGCTT GCTGTCTTCTTCCTCCGCGTCATCAGCGGCGAGTTGGGTACTACGCTTGGCATCCCCTACGAGGTTGTCGCCACC AGTGTAGCAGTCTTTCTCGGCATCCCATTGGGGGCGGCCGTTGTGACGCGGTTTGTGCTCCGCGCGGTGGCAGGA GGTGATTGGTATCAGCGCGTCTTCCTCCGCTTCGCGTCGCCGTGGTCGCTCATTGGCCTGCTGTACACCATTCTC ATTCTCTTCGCCTCCCAAGGCCGCCAGGTTGTACACCAGATCGTATCGGTGCTTCGAGTCGCTGCGCCGCTGATG GTGTACTTTGTGCTTATATTCTTTCTGACCCTTTGCATCAGCCGCCTTCTCGGCTTCAAGTTTCCTTTTCTCGTG GCACAGAGTTTCACCGCTGCCAGCAATAACTTGGAACTGGCTATCGCGGTGGCCATAGCGACCTTCGACCCCGAT AGCGACCAGGCACTGGCATCTACCGTCGGTCCGCTGATTGAGGTTCCCGTGCTGATGGGCTTGGTATACGCCGTT CGATGCATGGCAACTAGGTGGCGGTGGAATTAG
Gene	>Ophio5\|2678 ATGCACCCCGCTGGCCTCTCTACGGTGCTGGAGGAAGTAGGCAGCAGCCGAGCAGACGGAGAGAATCCGGAAAAC TCGGCAAGCAATAGAGCCCGCGTGTCACAGTCTGCGTTCAAGCACTTGGGTCTTCTCGACCGTTTTCTGCCGCTG TGCATCTTCTTAGCCATGGCCATCGGCATCATTCTCGCCAACTTGGTCCCGGAAGCGGGCCCTTCCCTGCAGAGG GGTCGATTCGTCGGAGTCTCGGTGCCCATTGGCAAGTTACTGCATCTCGACATCAGAAGGCCTGAAAGGTCTCGC GGAAAAAAGCACGTGTAGGCTAATCCAGTCGTCGTTGATTGCAGCCGTTGGTCTGCTCGTCATGATGTATCCGAT CCTATGCAGGGTGCGCTATGAATCGCTGCACCAACTCCTTTCGCGGAGGACAATGTGGAAGCAGATAGCCTTCAG TCTATTCGTCAACTGGATCGTTGCCCCTTTTCTCATGGTGCGTTGTCCGGACAGTGGCACGGTAGAACCTCGCCG CTCACATTTTGTCCACCTAGCTTGCCCTGGCCTGGGCATTTCTTCCGGACAAGAGTGCCCTTCGCACCGGACTTA TACTCGTCGGACTGGGAAGGTGTATTGCCATGGTTCGTCATCGTCTCCCCTTGTCTGCTCGCCCGTAGTGGAACT ACCAAGGCCGACATAGGAGTGGTGATCTAGGTGCTTATCTGGAACGGGGTGATGACGAATATTGTGCCATTCTCG TGGCCATCAACTCGGTCCTGCAGATGGTGCTTTTTGCCCCGCTTGCTGTCTTCTTCCTCCGCGTCATCAGCGGCG AGTTGGGTACTACGCTTGGCATCCCCTACGAGGTTGTCGCCACCAGTGTAGCAGTCTTTCTCGGCATCCCATTGG GGGCGGCCGTTGTGACGCGGTTTGTGCTCCGCGCGGTGGCAGGAGGTGATTGGTATCAGCGCGTCTTCCTCCGCT TCGCGTCGCCGTGGTCGCTCATTGGCCTGCTGTACACCATTCTCATTCTCTTCGCCTCCCAAGGCCGCCAGGTTG TACACCAGATCGTATCGGTGCTTCGAGTCGCTGCGCCGCTGATGGTGTACTTTGTGCTTATATTCTTTCTGACCC TTTGCATCAGCCGCCTTCTCGGCTTCAAGTTTCCTTTTCTCGTGGCACAGAGTTTCACCGCTGCCAGCAATAACT TGGAACTGGCTATCGCGGTGGCCATAGCGACCTTCGACCCCGATAGCGACCAGGCACTGGCATCTACCGTCGGTC CGCTGATTGAGGTTCCCGTGCTGATGGGCTTGGTATACGCCGTTCGATGCATGGCAACTAGGTGGCGGTGGAATT AG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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