Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2675
Gene name
Locationscaffold_217:831..3117
Strand-
Gene length (bp)2286
Transcript length (bp)1743
Coding sequence length (bp)1740
Protein length (aa) 580

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01699 Na_Ca_ex Sodium/calcium exchanger protein 3.3E-09 168 276
PF01699 Na_Ca_ex Sodium/calcium exchanger protein 3.1E-16 425 568

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 425 576 6.0E-32
sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 425 576 1.0E-26
sp|Q75XW3|CAX_APHHA Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 427 578 9.0E-26
sp|Q945S5|CAX4_ARATH Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 399 568 2.0E-21
sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 425 568 1.0E-20
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 425 576 6.0E-32
sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 425 576 1.0E-26
sp|Q75XW3|CAX_APHHA Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 427 578 9.0E-26
sp|Q945S5|CAX4_ARATH Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 399 568 2.0E-21
sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 425 568 1.0E-20
sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 425 568 5.0E-20
sp|Q769E5|CAX1A_ORYSJ Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 425 569 5.0E-20
sp|Q6YXZ1|CAX4_ORYSJ Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 425 573 1.0E-19
sp|P74072|CAX_SYNY3 Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 427 578 2.0E-19
sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 425 568 9.0E-19
sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 425 568 2.0E-18
sp|Q39253|CAX1_ARATH Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 440 570 5.0E-18
sp|Q93Z81|CAX3_ARATH Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 440 568 8.0E-18
sp|Q9LFZ8|CAX6_ARATH Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 425 568 2.0E-16
sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 96 259 8.0E-15
sp|Q5TKG3|CAX1B_ORYSJ Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 443 568 4.0E-14
sp|O34840|CHAA_BACSU Ca(2+)/H(+) antiporter ChaA OS=Bacillus subtilis (strain 168) GN=chaA PE=1 SV=1 424 573 4.0E-13
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 109 280 6.0E-12
sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 103 295 6.0E-11
sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 103 280 8.0E-11
sp|Q5KTQ9|CAX1C_ORYSJ Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1 425 578 8.0E-11
sp|Q6YXZ1|CAX4_ORYSJ Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 132 284 1.0E-10
sp|Q9LFZ8|CAX6_ARATH Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 65 280 1.0E-10
sp|P74072|CAX_SYNY3 Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 112 305 3.0E-09
sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 103 280 3.0E-09
sp|Q5TKG3|CAX1B_ORYSJ Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 116 280 5.0E-09
sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 168 280 1.0E-08
sp|Q75XW3|CAX_APHHA Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 111 305 1.0E-08
sp|Q9P7B3|YI14_SCHPO Putative cation exchanger C521.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC521.04c PE=1 SV=1 427 574 6.0E-07
[Show less]

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0006810 transport No
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 104 121 17
2 125 147 22
3 154 176 22
4 186 208 22
5 221 243 22
6 253 275 22
7 423 445 22
8 460 482 22
9 489 511 22
10 521 543 22
11 556 578 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 0.09 0.00 0.27
CcL In ants, during behavior modification 110.08 45.52 174.64
CcD In ants, recently dead 2.10 0.33 3.86

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.249569 no
SC16a CcD 0.249569 no
CcL CcD 0.000286 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2675
MEEASSNNARRHVCNNDSAAARDDDDDEPSSAELPGFDSASQSRLCALKDSTLHAFASWLVFAGKLKRCYRPTSS
SPSDDEASGELRDQGWAYGPVAGPLCDMIFSSWLNALLFFVPVGLASKMAGLGPVVVFATNAAAIVPLSALLTDA
TELHCLSLTLSLSLSLSLISIAALAHDHVRIVQASILGSVLVNLLLILGSALVVGSAANGEPAYNAADAQLLACL
LSVSVFTFLMPTAFNYSFSPGTRSSGLLSLNFSRMSSLLILAIYVLYLFHEIRSRCRHTNVRALVDLESNLSIAE
QRRLPPALLPLNTGHTVDMSSLHVPENGDPRVLHPDRGRRLADSRDDFRPRADSWQPSMSSRKLSPSPSFWSLSR
DSSVGGGDVRRGFSRSSLTMQILRDVHPDRDQPVENRLTGGSAAHEVVVAIVMLVLTSGLMSINAELLVSTIDDV
TRQTNLSEPVIGLILLPIVGNIAEYVTVVAVAAREKLDLAIAVAVGSSIQIALCVTPLTVLAGWILHKDLALTFN
TFEIATLVGAVLLVNLLILNETGSSLRTGSLKGVLMCACYLIIGLGAYFAPAIEA
Coding >Ophio5|2675
ATGGAAGAAGCTTCTTCGAATAACGCCCGTCGCCATGTCTGCAACAACGACTCCGCGGCTGCTCGAGATGACGAT
GACGATGAGCCCTCTTCTGCCGAGCTGCCCGGCTTCGACTCTGCCTCTCAGTCTAGACTCTGCGCCTTGAAAGAC
AGCACTCTGCATGCCTTTGCATCATGGCTCGTCTTCGCCGGCAAGCTCAAGCGCTGCTACCGCCCGACATCGTCG
TCACCTTCTGACGACGAGGCTTCTGGAGAGCTTCGCGACCAAGGTTGGGCATATGGTCCCGTGGCCGGCCCGTTA
TGTGACATGATCTTCTCGTCATGGCTTAACGCGCTGCTCTTCTTCGTTCCCGTCGGCCTGGCCAGCAAGATGGCT
GGCTTGGGCCCTGTGGTCGTCTTTGCGACTAATGCAGCTGCCATCGTCCCGCTCTCGGCACTCTTGACTGACGCT
ACTGAGCTTCACTGCCTCTCGCTGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCAGCATTGCCGCCCTGGCC
CACGACCACGTTCGCATCGTTCAGGCCTCTATTCTCGGCTCCGTTCTCGTCAACCTGCTACTGATCCTCGGCTCT
GCCCTCGTCGTCGGCAGCGCCGCCAACGGCGAGCCGGCGTATAACGCGGCTGACGCTCAGCTTCTCGCTTGTCTA
CTTTCCGTCTCCGTTTTTACCTTCCTGATGCCGACTGCCTTCAACTACTCTTTCAGCCCAGGCACGCGCTCATCC
GGCCTTCTCAGCCTCAACTTCAGCAGGATGTCGTCTCTACTTATCCTCGCCATCTACGTCCTCTACTTATTCCAC
GAGATTCGTTCGCGCTGCCGTCACACCAATGTTCGTGCCCTCGTCGATCTTGAAAGTAATCTCTCCATAGCCGAG
CAACGCCGATTGCCGCCTGCTTTACTCCCCCTGAACACGGGCCACACCGTGGATATGAGCTCGCTTCACGTGCCA
GAAAACGGCGATCCCAGAGTCCTTCATCCTGACCGAGGACGTCGTCTCGCCGATTCCAGAGACGACTTCAGGCCC
CGCGCAGACTCGTGGCAGCCGTCCATGTCGTCACGGAAGCTTTCGCCTTCGCCGTCTTTTTGGTCCTTGAGCAGA
GACTCCTCTGTTGGCGGTGGCGACGTCAGGAGAGGCTTTTCGCGATCCAGCCTAACGATGCAGATTCTGAGGGAC
GTCCACCCCGATCGAGACCAGCCAGTCGAGAACCGACTCACAGGCGGCAGCGCAGCCCATGAAGTCGTCGTGGCC
ATCGTCATGCTCGTCCTCACCTCCGGACTCATGTCCATCAACGCCGAACTTCTCGTCAGCACCATCGACGACGTC
ACACGCCAGACGAACCTCTCTGAGCCCGTCATCGGCCTCATCCTGCTCCCTATCGTGGGCAACATCGCCGAGTAC
GTCACCGTAGTGGCCGTGGCTGCACGTGAGAAGCTCGATCTGGCTATTGCCGTAGCTGTCGGCTCGTCTATCCAG
ATTGCCTTGTGTGTCACGCCTCTGACGGTTCTGGCTGGTTGGATCTTGCACAAAGACTTGGCCTTGACCTTCAAC
ACGTTCGAGATTGCCACGCTTGTCGGTGCTGTTTTACTTGTCAACCTTCTCATCCTCAATGAGACGGGCAGCAGT
CTCCGGACCGGCAGCCTCAAGGGAGTCCTGATGTGTGCCTGCTATCTCATCATCGGACTAGGAGCGTACTTTGCC
CCAGCGATTGAGGCG
Transcript >Ophio5|2675
ATGGAAGAAGCTTCTTCGAATAACGCCCGTCGCCATGTCTGCAACAACGACTCCGCGGCTGCTCGAGATGACGAT
GACGATGAGCCCTCTTCTGCCGAGCTGCCCGGCTTCGACTCTGCCTCTCAGTCTAGACTCTGCGCCTTGAAAGAC
AGCACTCTGCATGCCTTTGCATCATGGCTCGTCTTCGCCGGCAAGCTCAAGCGCTGCTACCGCCCGACATCGTCG
TCACCTTCTGACGACGAGGCTTCTGGAGAGCTTCGCGACCAAGGTTGGGCATATGGTCCCGTGGCCGGCCCGTTA
TGTGACATGATCTTCTCGTCATGGCTTAACGCGCTGCTCTTCTTCGTTCCCGTCGGCCTGGCCAGCAAGATGGCT
GGCTTGGGCCCTGTGGTCGTCTTTGCGACTAATGCAGCTGCCATCGTCCCGCTCTCGGCACTCTTGACTGACGCT
ACTGAGCTTCACTGCCTCTCGCTGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCAGCATTGCCGCCCTGGCC
CACGACCACGTTCGCATCGTTCAGGCCTCTATTCTCGGCTCCGTTCTCGTCAACCTGCTACTGATCCTCGGCTCT
GCCCTCGTCGTCGGCAGCGCCGCCAACGGCGAGCCGGCGTATAACGCGGCTGACGCTCAGCTTCTCGCTTGTCTA
CTTTCCGTCTCCGTTTTTACCTTCCTGATGCCGACTGCCTTCAACTACTCTTTCAGCCCAGGCACGCGCTCATCC
GGCCTTCTCAGCCTCAACTTCAGCAGGATGTCGTCTCTACTTATCCTCGCCATCTACGTCCTCTACTTATTCCAC
GAGATTCGTTCGCGCTGCCGTCACACCAATGTTCGTGCCCTCGTCGATCTTGAAAGTAATCTCTCCATAGCCGAG
CAACGCCGATTGCCGCCTGCTTTACTCCCCCTGAACACGGGCCACACCGTGGATATGAGCTCGCTTCACGTGCCA
GAAAACGGCGATCCCAGAGTCCTTCATCCTGACCGAGGACGTCGTCTCGCCGATTCCAGAGACGACTTCAGGCCC
CGCGCAGACTCGTGGCAGCCGTCCATGTCGTCACGGAAGCTTTCGCCTTCGCCGTCTTTTTGGTCCTTGAGCAGA
GACTCCTCTGTTGGCGGTGGCGACGTCAGGAGAGGCTTTTCGCGATCCAGCCTAACGATGCAGATTCTGAGGGAC
GTCCACCCCGATCGAGACCAGCCAGTCGAGAACCGACTCACAGGCGGCAGCGCAGCCCATGAAGTCGTCGTGGCC
ATCGTCATGCTCGTCCTCACCTCCGGACTCATGTCCATCAACGCCGAACTTCTCGTCAGCACCATCGACGACGTC
ACACGCCAGACGAACCTCTCTGAGCCCGTCATCGGCCTCATCCTGCTCCCTATCGTGGGCAACATCGCCGAGTAC
GTCACCGTAGTGGCCGTGGCTGCACGTGAGAAGCTCGATCTGGCTATTGCCGTAGCTGTCGGCTCGTCTATCCAG
ATTGCCTTGTGTGTCACGCCTCTGACGGTTCTGGCTGGTTGGATCTTGCACAAAGACTTGGCCTTGACCTTCAAC
ACGTTCGAGATTGCCACGCTTGTCGGTGCTGTTTTACTTGTCAACCTTCTCATCCTCAATGAGACGGGCAGCAGT
CTCCGGACCGGCAGCCTCAAGGGAGTCCTGATGTGTGCCTGCTATCTCATCATCGGACTAGGAGCGTACTTTGCC
CCAGCGATTGAGGCGTAG
Gene >Ophio5|2675
ATGGAAGAAGCTTCTTCGAATAACGCCCGTCGCCATGTCTGCAACAACGACTCCGCGGCTGCTCGAGATGACGAT
GACGATGAGCCCTCTTCTGCCGAGCTGCCCGGCTTCGACTCTGCCTCTCAGTCTAGACTCTGCGCCTTGAAAGGT
GAGCCCCTTTCCTATCAGAGAAAAAGGGGGGGAGAGAAGCCTCAGCAAAACCGCCGACTTCCTTCGTTTGCTCAA
CATCGTCACTCTCTCCCAGACAGCACTCTGCATGCCTTTGCATCATGGCTCGTCTTCGCCGGCAAGCTCAAGCGC
TGCTACCGCCCGACATCGTCGTCACCTTCTGACGACGAGGCTTCTGGAGAGCTTCGCGACCAAGGTTGGGCATAT
GGTCCCGTGGCCGGCCCGTTATGTGACATGATCTTCTCGTCATGGCTTAACGCGCTGCTCTTCTTCGTTCCCGTC
GGCCTGGCCAGCAAGATGGCTGGCTTGGGCCCTGTGGTCGTCTTTGCGACTAATGCAGCTGCCATCGTCCCGCTC
TCGGCACTCTTGACTGACGCTACTGAGCGTGTCGCTGCTCATGCTGGCGATACCGTCGGCGCGCTGCTTAACATT
AGCTTCGGAAACCTGGTTGAGCTGATTCTGTTGTACGGGCTCATGCTCCTTACTTCCTCTGCTACTTCTCCATTT
CCTGCTCTCCTTTTTCCTATCCTCCCCCCTCAGTTCACTGCCTCTCGCTGACTCTCTCTCTCTCTCTCTCTCTCT
CTCTCATCAGCATGTAAGTCGTGCTGCCTAAGTATTCAGTTATCAACTATAAACCACTCTCCGCCCCTTTCACCG
CTCATCGCCTCCAGTGCCGCCCTGGCCCACGACCACGTTCGCATCGTTCAGGCCTCTATTCTCGGCTCCGTTCTC
GTCAACCTGCTACTGATCCTCGGCTCTGCCCTCGTCGTCGGCAGCGCCGCCAACGGCGAGCCGGCGTATAACGCG
GCTGACGCTCAGCTTCTCGCTTGTCTACTTTCCGTCTCCGTTTTTACCTTCCTGATGCCGGTACGGAAATGGTCC
TCTATTGCCTTGAGAGCTCAGCTGACTCGTTCATGGCTTCAGACTGCCTTCAACTACTCTTTCAGCCCAGGCACG
CGCTCATCCGGCCTTCTCAGCCTCAACTTCAGCAGGATGTCGTCTCTACTTATCCTCGCCATCTACGTCCTCTAC
TTATTCCACGAGATTCGTTCGCGCTGCCGTCACACCAATGTTCGTGCCCTCGTCGATCTTGAAAGTAATCTCTCC
ATAGCCGAGCAACGCCGATTGCCGCCTGCTTTACTCCCCCTGAACAGTCTGTCACATCCTACGTCCACTGGCGGT
CCGCAGCCAATGTCACCTCGTACGATCCGTTTTATTGATGAGCCACCTTCTTCAGCGGGCCACACCGTGGATATG
AGCTCGCTTCACGTGCCAGAAAACGGCGATCCCAGAGTCCTTCATCCTGACCGAGGACGTCGTCTCGCCGATTCC
AGAGACGACTTCAGGCCCCGCGCAGACTCGTGGCAGCCGTCCATGTCGTCACGGAAGCTTTCGCCTTCGCCGTCT
TTTTGGTCCTTGAGCAGAGACTCCTCTGTTGGCGGTGGCGACGTCAGGAGAGGCTTTTCGCGATCCAGCCTAACG
ATGCAGATTCTGAGGGACGTCCACCCCGATCGAGACCAGCCAGTCGAGAACCGACTCACAGGCGGCAGCGCAGCC
CATGAAGTCGTCGTGGCCATCGTCATGCTCGTCCTCACCTCCGGACTCATGTCCATCAACGCCGAACTTCTCGTC
AGCACCATCGACGACGTCACACGCCAGACGAACCTCTCTGAGCCCGTCATCGGCCTCATCCTGCTCCCTATCGTG
GGCAACATCGCCGAGTACGTCACCGTAGTGGCCGTGGCTGCACGTGAGAAGCTCGATCTGGCTATTGCCGTAGCT
GTCGGCTCGTCTATCCAGATTGCCTTGTGTGTCACGCCTCTGACGGTTCTGGCTGGTTGGATCTTGCACAAAGAC
TTGGCCTTGACCTTCAACACGTTCGAGATTGCCACGCTTGTCGGTGCTGTTTTACTTGTCAACCTTCTCATCCTC
AATGAGACGGGCAGCAGTCTCCGGACCGGCAGCCTCAAGGGAGTCCTGATGTGTGCCTGCTATCTCATCATCGGG
TTAGTGCCAGTTTATCGTCTTCGACTTAGGCTCGTCGTCTTGCTAACGTCTCTTTGTTTTGTGTTTCCAACTAGA
CTAGGAGCGTACTTTGCCCCAGCGATTGAGGCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail