Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2675
Gene name
Locationscaffold_217:831..3117
Strand-
Gene length (bp)2286
Transcript length (bp)1743
Coding sequence length (bp)1740
Protein length (aa) 580

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01699 Na_Ca_ex Sodium/calcium exchanger protein 3.3E-09 168 276
PF01699 Na_Ca_ex Sodium/calcium exchanger protein 3.1E-16 425 568

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 425 576 6.0E-32
sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 425 576 1.0E-26
sp|Q75XW3|CAX_APHHA Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 427 578 9.0E-26
sp|Q945S5|CAX4_ARATH Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 399 568 2.0E-21
sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 425 568 1.0E-20
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Swissprot ID Swissprot Description Start End E-value
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 425 576 6.0E-32
sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 425 576 1.0E-26
sp|Q75XW3|CAX_APHHA Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 427 578 9.0E-26
sp|Q945S5|CAX4_ARATH Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 399 568 2.0E-21
sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 425 568 1.0E-20
sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 425 568 5.0E-20
sp|Q769E5|CAX1A_ORYSJ Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 425 569 5.0E-20
sp|Q6YXZ1|CAX4_ORYSJ Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 425 573 1.0E-19
sp|P74072|CAX_SYNY3 Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 427 578 2.0E-19
sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 425 568 9.0E-19
sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 425 568 2.0E-18
sp|Q39253|CAX1_ARATH Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 440 570 5.0E-18
sp|Q93Z81|CAX3_ARATH Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 440 568 8.0E-18
sp|Q9LFZ8|CAX6_ARATH Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 425 568 2.0E-16
sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 96 259 8.0E-15
sp|Q5TKG3|CAX1B_ORYSJ Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 443 568 4.0E-14
sp|O34840|CHAA_BACSU Ca(2+)/H(+) antiporter ChaA OS=Bacillus subtilis (strain 168) GN=chaA PE=1 SV=1 424 573 4.0E-13
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 109 280 6.0E-12
sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 103 295 6.0E-11
sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 103 280 8.0E-11
sp|Q5KTQ9|CAX1C_ORYSJ Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1 425 578 8.0E-11
sp|Q6YXZ1|CAX4_ORYSJ Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 132 284 1.0E-10
sp|Q9LFZ8|CAX6_ARATH Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 65 280 1.0E-10
sp|P74072|CAX_SYNY3 Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 112 305 3.0E-09
sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 103 280 3.0E-09
sp|Q5TKG3|CAX1B_ORYSJ Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 116 280 5.0E-09
sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 168 280 1.0E-08
sp|Q75XW3|CAX_APHHA Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 111 305 1.0E-08
sp|Q9P7B3|YI14_SCHPO Putative cation exchanger C521.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC521.04c PE=1 SV=1 427 574 6.0E-07
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0006810 transport No
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 104 121 17
2 125 147 22
3 154 176 22
4 186 208 22
5 221 243 22
6 253 275 22
7 423 445 22
8 460 482 22
9 489 511 22
10 521 543 22
11 556 578 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2675
MEEASSNNARRHVCNNDSAAARDDDDDEPSSAELPGFDSASQSRLCALKDSTLHAFASWLVFAGKLKRCYRPTSS
SPSDDEASGELRDQGWAYGPVAGPLCDMIFSSWLNALLFFVPVGLASKMAGLGPVVVFATNAAAIVPLSALLTDA
TELHCLSLTLSLSLSLSLISIAALAHDHVRIVQASILGSVLVNLLLILGSALVVGSAANGEPAYNAADAQLLACL
LSVSVFTFLMPTAFNYSFSPGTRSSGLLSLNFSRMSSLLILAIYVLYLFHEIRSRCRHTNVRALVDLESNLSIAE
QRRLPPALLPLNTGHTVDMSSLHVPENGDPRVLHPDRGRRLADSRDDFRPRADSWQPSMSSRKLSPSPSFWSLSR
DSSVGGGDVRRGFSRSSLTMQILRDVHPDRDQPVENRLTGGSAAHEVVVAIVMLVLTSGLMSINAELLVSTIDDV
TRQTNLSEPVIGLILLPIVGNIAEYVTVVAVAAREKLDLAIAVAVGSSIQIALCVTPLTVLAGWILHKDLALTFN
TFEIATLVGAVLLVNLLILNETGSSLRTGSLKGVLMCACYLIIGLGAYFAPAIEA
Coding >Ophio5|2675
ATGGAAGAAGCTTCTTCGAATAACGCCCGTCGCCATGTCTGCAACAACGACTCCGCGGCTGCTCGAGATGACGAT
GACGATGAGCCCTCTTCTGCCGAGCTGCCCGGCTTCGACTCTGCCTCTCAGTCTAGACTCTGCGCCTTGAAAGAC
AGCACTCTGCATGCCTTTGCATCATGGCTCGTCTTCGCCGGCAAGCTCAAGCGCTGCTACCGCCCGACATCGTCG
TCACCTTCTGACGACGAGGCTTCTGGAGAGCTTCGCGACCAAGGTTGGGCATATGGTCCCGTGGCCGGCCCGTTA
TGTGACATGATCTTCTCGTCATGGCTTAACGCGCTGCTCTTCTTCGTTCCCGTCGGCCTGGCCAGCAAGATGGCT
GGCTTGGGCCCTGTGGTCGTCTTTGCGACTAATGCAGCTGCCATCGTCCCGCTCTCGGCACTCTTGACTGACGCT
ACTGAGCTTCACTGCCTCTCGCTGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCAGCATTGCCGCCCTGGCC
CACGACCACGTTCGCATCGTTCAGGCCTCTATTCTCGGCTCCGTTCTCGTCAACCTGCTACTGATCCTCGGCTCT
GCCCTCGTCGTCGGCAGCGCCGCCAACGGCGAGCCGGCGTATAACGCGGCTGACGCTCAGCTTCTCGCTTGTCTA
CTTTCCGTCTCCGTTTTTACCTTCCTGATGCCGACTGCCTTCAACTACTCTTTCAGCCCAGGCACGCGCTCATCC
GGCCTTCTCAGCCTCAACTTCAGCAGGATGTCGTCTCTACTTATCCTCGCCATCTACGTCCTCTACTTATTCCAC
GAGATTCGTTCGCGCTGCCGTCACACCAATGTTCGTGCCCTCGTCGATCTTGAAAGTAATCTCTCCATAGCCGAG
CAACGCCGATTGCCGCCTGCTTTACTCCCCCTGAACACGGGCCACACCGTGGATATGAGCTCGCTTCACGTGCCA
GAAAACGGCGATCCCAGAGTCCTTCATCCTGACCGAGGACGTCGTCTCGCCGATTCCAGAGACGACTTCAGGCCC
CGCGCAGACTCGTGGCAGCCGTCCATGTCGTCACGGAAGCTTTCGCCTTCGCCGTCTTTTTGGTCCTTGAGCAGA
GACTCCTCTGTTGGCGGTGGCGACGTCAGGAGAGGCTTTTCGCGATCCAGCCTAACGATGCAGATTCTGAGGGAC
GTCCACCCCGATCGAGACCAGCCAGTCGAGAACCGACTCACAGGCGGCAGCGCAGCCCATGAAGTCGTCGTGGCC
ATCGTCATGCTCGTCCTCACCTCCGGACTCATGTCCATCAACGCCGAACTTCTCGTCAGCACCATCGACGACGTC
ACACGCCAGACGAACCTCTCTGAGCCCGTCATCGGCCTCATCCTGCTCCCTATCGTGGGCAACATCGCCGAGTAC
GTCACCGTAGTGGCCGTGGCTGCACGTGAGAAGCTCGATCTGGCTATTGCCGTAGCTGTCGGCTCGTCTATCCAG
ATTGCCTTGTGTGTCACGCCTCTGACGGTTCTGGCTGGTTGGATCTTGCACAAAGACTTGGCCTTGACCTTCAAC
ACGTTCGAGATTGCCACGCTTGTCGGTGCTGTTTTACTTGTCAACCTTCTCATCCTCAATGAGACGGGCAGCAGT
CTCCGGACCGGCAGCCTCAAGGGAGTCCTGATGTGTGCCTGCTATCTCATCATCGGACTAGGAGCGTACTTTGCC
CCAGCGATTGAGGCG
Transcript >Ophio5|2675
ATGGAAGAAGCTTCTTCGAATAACGCCCGTCGCCATGTCTGCAACAACGACTCCGCGGCTGCTCGAGATGACGAT
GACGATGAGCCCTCTTCTGCCGAGCTGCCCGGCTTCGACTCTGCCTCTCAGTCTAGACTCTGCGCCTTGAAAGAC
AGCACTCTGCATGCCTTTGCATCATGGCTCGTCTTCGCCGGCAAGCTCAAGCGCTGCTACCGCCCGACATCGTCG
TCACCTTCTGACGACGAGGCTTCTGGAGAGCTTCGCGACCAAGGTTGGGCATATGGTCCCGTGGCCGGCCCGTTA
TGTGACATGATCTTCTCGTCATGGCTTAACGCGCTGCTCTTCTTCGTTCCCGTCGGCCTGGCCAGCAAGATGGCT
GGCTTGGGCCCTGTGGTCGTCTTTGCGACTAATGCAGCTGCCATCGTCCCGCTCTCGGCACTCTTGACTGACGCT
ACTGAGCTTCACTGCCTCTCGCTGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCAGCATTGCCGCCCTGGCC
CACGACCACGTTCGCATCGTTCAGGCCTCTATTCTCGGCTCCGTTCTCGTCAACCTGCTACTGATCCTCGGCTCT
GCCCTCGTCGTCGGCAGCGCCGCCAACGGCGAGCCGGCGTATAACGCGGCTGACGCTCAGCTTCTCGCTTGTCTA
CTTTCCGTCTCCGTTTTTACCTTCCTGATGCCGACTGCCTTCAACTACTCTTTCAGCCCAGGCACGCGCTCATCC
GGCCTTCTCAGCCTCAACTTCAGCAGGATGTCGTCTCTACTTATCCTCGCCATCTACGTCCTCTACTTATTCCAC
GAGATTCGTTCGCGCTGCCGTCACACCAATGTTCGTGCCCTCGTCGATCTTGAAAGTAATCTCTCCATAGCCGAG
CAACGCCGATTGCCGCCTGCTTTACTCCCCCTGAACACGGGCCACACCGTGGATATGAGCTCGCTTCACGTGCCA
GAAAACGGCGATCCCAGAGTCCTTCATCCTGACCGAGGACGTCGTCTCGCCGATTCCAGAGACGACTTCAGGCCC
CGCGCAGACTCGTGGCAGCCGTCCATGTCGTCACGGAAGCTTTCGCCTTCGCCGTCTTTTTGGTCCTTGAGCAGA
GACTCCTCTGTTGGCGGTGGCGACGTCAGGAGAGGCTTTTCGCGATCCAGCCTAACGATGCAGATTCTGAGGGAC
GTCCACCCCGATCGAGACCAGCCAGTCGAGAACCGACTCACAGGCGGCAGCGCAGCCCATGAAGTCGTCGTGGCC
ATCGTCATGCTCGTCCTCACCTCCGGACTCATGTCCATCAACGCCGAACTTCTCGTCAGCACCATCGACGACGTC
ACACGCCAGACGAACCTCTCTGAGCCCGTCATCGGCCTCATCCTGCTCCCTATCGTGGGCAACATCGCCGAGTAC
GTCACCGTAGTGGCCGTGGCTGCACGTGAGAAGCTCGATCTGGCTATTGCCGTAGCTGTCGGCTCGTCTATCCAG
ATTGCCTTGTGTGTCACGCCTCTGACGGTTCTGGCTGGTTGGATCTTGCACAAAGACTTGGCCTTGACCTTCAAC
ACGTTCGAGATTGCCACGCTTGTCGGTGCTGTTTTACTTGTCAACCTTCTCATCCTCAATGAGACGGGCAGCAGT
CTCCGGACCGGCAGCCTCAAGGGAGTCCTGATGTGTGCCTGCTATCTCATCATCGGACTAGGAGCGTACTTTGCC
CCAGCGATTGAGGCGTAG
Gene >Ophio5|2675
ATGGAAGAAGCTTCTTCGAATAACGCCCGTCGCCATGTCTGCAACAACGACTCCGCGGCTGCTCGAGATGACGAT
GACGATGAGCCCTCTTCTGCCGAGCTGCCCGGCTTCGACTCTGCCTCTCAGTCTAGACTCTGCGCCTTGAAAGGT
GAGCCCCTTTCCTATCAGAGAAAAAGGGGGGGAGAGAAGCCTCAGCAAAACCGCCGACTTCCTTCGTTTGCTCAA
CATCGTCACTCTCTCCCAGACAGCACTCTGCATGCCTTTGCATCATGGCTCGTCTTCGCCGGCAAGCTCAAGCGC
TGCTACCGCCCGACATCGTCGTCACCTTCTGACGACGAGGCTTCTGGAGAGCTTCGCGACCAAGGTTGGGCATAT
GGTCCCGTGGCCGGCCCGTTATGTGACATGATCTTCTCGTCATGGCTTAACGCGCTGCTCTTCTTCGTTCCCGTC
GGCCTGGCCAGCAAGATGGCTGGCTTGGGCCCTGTGGTCGTCTTTGCGACTAATGCAGCTGCCATCGTCCCGCTC
TCGGCACTCTTGACTGACGCTACTGAGCGTGTCGCTGCTCATGCTGGCGATACCGTCGGCGCGCTGCTTAACATT
AGCTTCGGAAACCTGGTTGAGCTGATTCTGTTGTACGGGCTCATGCTCCTTACTTCCTCTGCTACTTCTCCATTT
CCTGCTCTCCTTTTTCCTATCCTCCCCCCTCAGTTCACTGCCTCTCGCTGACTCTCTCTCTCTCTCTCTCTCTCT
CTCTCATCAGCATGTAAGTCGTGCTGCCTAAGTATTCAGTTATCAACTATAAACCACTCTCCGCCCCTTTCACCG
CTCATCGCCTCCAGTGCCGCCCTGGCCCACGACCACGTTCGCATCGTTCAGGCCTCTATTCTCGGCTCCGTTCTC
GTCAACCTGCTACTGATCCTCGGCTCTGCCCTCGTCGTCGGCAGCGCCGCCAACGGCGAGCCGGCGTATAACGCG
GCTGACGCTCAGCTTCTCGCTTGTCTACTTTCCGTCTCCGTTTTTACCTTCCTGATGCCGGTACGGAAATGGTCC
TCTATTGCCTTGAGAGCTCAGCTGACTCGTTCATGGCTTCAGACTGCCTTCAACTACTCTTTCAGCCCAGGCACG
CGCTCATCCGGCCTTCTCAGCCTCAACTTCAGCAGGATGTCGTCTCTACTTATCCTCGCCATCTACGTCCTCTAC
TTATTCCACGAGATTCGTTCGCGCTGCCGTCACACCAATGTTCGTGCCCTCGTCGATCTTGAAAGTAATCTCTCC
ATAGCCGAGCAACGCCGATTGCCGCCTGCTTTACTCCCCCTGAACAGTCTGTCACATCCTACGTCCACTGGCGGT
CCGCAGCCAATGTCACCTCGTACGATCCGTTTTATTGATGAGCCACCTTCTTCAGCGGGCCACACCGTGGATATG
AGCTCGCTTCACGTGCCAGAAAACGGCGATCCCAGAGTCCTTCATCCTGACCGAGGACGTCGTCTCGCCGATTCC
AGAGACGACTTCAGGCCCCGCGCAGACTCGTGGCAGCCGTCCATGTCGTCACGGAAGCTTTCGCCTTCGCCGTCT
TTTTGGTCCTTGAGCAGAGACTCCTCTGTTGGCGGTGGCGACGTCAGGAGAGGCTTTTCGCGATCCAGCCTAACG
ATGCAGATTCTGAGGGACGTCCACCCCGATCGAGACCAGCCAGTCGAGAACCGACTCACAGGCGGCAGCGCAGCC
CATGAAGTCGTCGTGGCCATCGTCATGCTCGTCCTCACCTCCGGACTCATGTCCATCAACGCCGAACTTCTCGTC
AGCACCATCGACGACGTCACACGCCAGACGAACCTCTCTGAGCCCGTCATCGGCCTCATCCTGCTCCCTATCGTG
GGCAACATCGCCGAGTACGTCACCGTAGTGGCCGTGGCTGCACGTGAGAAGCTCGATCTGGCTATTGCCGTAGCT
GTCGGCTCGTCTATCCAGATTGCCTTGTGTGTCACGCCTCTGACGGTTCTGGCTGGTTGGATCTTGCACAAAGAC
TTGGCCTTGACCTTCAACACGTTCGAGATTGCCACGCTTGTCGGTGCTGTTTTACTTGTCAACCTTCTCATCCTC
AATGAGACGGGCAGCAGTCTCCGGACCGGCAGCCTCAAGGGAGTCCTGATGTGTGCCTGCTATCTCATCATCGGG
TTAGTGCCAGTTTATCGTCTTCGACTTAGGCTCGTCGTCTTGCTAACGTCTCTTTGTTTTGTGTTTCCAACTAGA
CTAGGAGCGTACTTTGCCCCAGCGATTGAGGCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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