Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2671
Gene name
Locationscaffold_216:19682..21626
Strand-
Gene length (bp)1944
Transcript length (bp)1785
Coding sequence length (bp)1782
Protein length (aa) 594

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08216 CTNNBL Catenin-beta-like, Arm-motif containing nuclear 1.1E-178 95 565

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9UUK1|CTBL1_SCHPO Beta-catenin-like protein 1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ctnnbl1 PE=1 SV=1 82 573 6.0E-101
sp|Q8WYA6|CTBL1_HUMAN Beta-catenin-like protein 1 OS=Homo sapiens GN=CTNNBL1 PE=1 SV=1 114 572 2.0E-76
sp|Q4V8K2|CTBL1_RAT Beta-catenin-like protein 1 OS=Rattus norvegicus GN=Ctnnbl1 PE=1 SV=1 114 572 2.0E-75
sp|Q9CWL8|CTBL1_MOUSE Beta-catenin-like protein 1 OS=Mus musculus GN=Ctnnbl1 PE=1 SV=1 114 572 2.0E-74
sp|O62703|CTBL1_BOVIN Beta-catenin-like protein 1 OS=Bos taurus GN=CTNNBL1 PE=2 SV=3 114 572 7.0E-74

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 58 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2671
MASVDDIFKNVGLPSKRKRDAITDPNEIYKSSKLAASSQRHRNQDDSNAGSHAADDDDDLEAGPAPPPQQPEAED
VGDDDEGRFFGGGISAQESEMLDFVAGAGEDADQSPEKIDAAWMRRTAQNLEKRIVTNTQLRAKHEGEPQKFIDS
EAQLDADVKALSILSDHPELYPDFVALGCTTHLVSLLAHDNTDIAIDALEIMGELTDEDVAADDSQWDALVDALL
EADLIGLLVSNLARLDEADEADRSGVYYALGIVENLCSRSTTATRIGAHDGLLGWLLLRIQRKEQPIAVSQNKQY
AAEILAILAQSSAETRRQMAGHDAIDVMLQLVAPYRKSDPDKGGEEEEYMENLFEALTCLVDEPSGKVKFIEAEG
VELCLIMFKEGKRSKAPALRLMDHATSGATAAAVDVCVKLVDAGGLRPLFTLFVKKSRDQRLLGHMLGVLTSMLR
LLPAGSAERIRTLAKFVEKDYEKTAKLVQLHADFGARVARAEAQHRQDAANADDEDPAKAEVELLSRRLDAGLFA
LQQVDVLLAWLVAEDGGARKRIQKLLAERDENLDTMAATIKEQREALDTTEEDSRDMSDMLDTLLELLR
Coding >Ophio5|2671
ATGGCTAGCGTCGACGACATCTTCAAGAATGTCGGCCTGCCCAGCAAGCGGAAACGAGATGCCATCACCGACCCA
AACGAAATCTACAAATCCAGCAAGCTCGCGGCCTCAAGCCAACGACACCGCAACCAAGACGACTCCAATGCTGGC
AGCCATGCTGCCGACGATGACGACGACCTCGAGGCCGGCCCCGCGCCCCCGCCGCAACAACCGGAGGCCGAGGAC
GTCGGCGACGATGATGAGGGCCGTTTCTTTGGAGGCGGCATATCCGCCCAAGAGTCCGAGATGCTCGACTTCGTA
GCCGGCGCAGGGGAGGACGCGGACCAAAGTCCCGAAAAGATCGACGCCGCTTGGATGCGCAGGACGGCCCAGAAC
TTGGAGAAGCGCATCGTCACAAACACCCAGCTCCGCGCCAAGCACGAAGGCGAACCGCAAAAGTTCATCGACAGC
GAGGCCCAGCTCGATGCCGATGTCAAGGCTCTGTCCATCCTCTCCGACCACCCCGAGCTGTACCCTGACTTTGTT
GCTCTTGGCTGCACAACCCACCTCGTCAGTCTTCTCGCCCACGACAATACCGACATCGCCATCGACGCCCTGGAG
ATTATGGGCGAGCTGACGGACGAGGACGTCGCCGCCGACGACAGCCAATGGGATGCTTTGGTTGACGCTCTGCTT
GAGGCCGACCTGATCGGACTACTCGTCTCCAACCTGGCTCGCCTGGACGAAGCCGATGAGGCCGACCGCAGCGGC
GTCTACTATGCTCTCGGTATTGTTGAGAATCTCTGCTCGCGTTCGACGACGGCCACCCGCATCGGAGCCCATGAC
GGTCTCCTTGGCTGGTTGCTGCTGCGCATCCAGCGCAAGGAGCAGCCTATCGCCGTCTCCCAGAACAAGCAGTAC
GCCGCCGAGATTCTCGCCATCCTTGCCCAGTCTTCGGCCGAGACTCGCCGCCAGATGGCCGGCCACGATGCCATC
GATGTCATGCTGCAGCTAGTTGCGCCCTACCGGAAAAGCGACCCGGACAAGGGCGGCGAGGAGGAAGAGTATATG
GAGAACCTCTTCGAGGCCCTCACCTGCCTCGTCGACGAGCCGTCGGGCAAGGTCAAGTTCATCGAGGCCGAAGGT
GTCGAGCTCTGCCTCATCATGTTCAAAGAGGGCAAGCGGAGCAAGGCCCCAGCCCTTCGCCTCATGGACCATGCC
ACGAGCGGCGCCACTGCCGCCGCCGTTGACGTCTGCGTCAAGCTCGTGGACGCCGGCGGCCTGAGGCCCCTCTTT
ACCCTCTTCGTCAAAAAGAGCCGGGACCAACGCTTGCTGGGTCACATGCTCGGCGTGCTGACGTCTATGCTGCGC
TTGCTGCCCGCCGGCTCGGCCGAGAGGATCCGCACCCTGGCCAAGTTCGTGGAGAAGGATTACGAGAAGACGGCG
AAGCTGGTGCAGCTGCACGCCGACTTTGGCGCTCGCGTCGCGCGAGCCGAGGCCCAACATCGTCAGGACGCTGCC
AATGCCGATGACGAGGACCCGGCCAAAGCCGAGGTCGAGCTGTTGTCGCGCCGGCTCGACGCGGGGCTCTTCGCC
TTGCAGCAGGTGGACGTCTTATTGGCCTGGCTGGTGGCCGAGGATGGCGGAGCTAGGAAACGGATCCAGAAGCTG
CTGGCGGAGCGGGACGAGAATTTGGATACCATGGCGGCGACTATCAAGGAGCAGCGGGAGGCTTTAGATACCACC
GAGGAGGACAGTCGGGATATGAGCGACATGTTAGATACACTACTGGAGTTATTGCGA
Transcript >Ophio5|2671
ATGGCTAGCGTCGACGACATCTTCAAGAATGTCGGCCTGCCCAGCAAGCGGAAACGAGATGCCATCACCGACCCA
AACGAAATCTACAAATCCAGCAAGCTCGCGGCCTCAAGCCAACGACACCGCAACCAAGACGACTCCAATGCTGGC
AGCCATGCTGCCGACGATGACGACGACCTCGAGGCCGGCCCCGCGCCCCCGCCGCAACAACCGGAGGCCGAGGAC
GTCGGCGACGATGATGAGGGCCGTTTCTTTGGAGGCGGCATATCCGCCCAAGAGTCCGAGATGCTCGACTTCGTA
GCCGGCGCAGGGGAGGACGCGGACCAAAGTCCCGAAAAGATCGACGCCGCTTGGATGCGCAGGACGGCCCAGAAC
TTGGAGAAGCGCATCGTCACAAACACCCAGCTCCGCGCCAAGCACGAAGGCGAACCGCAAAAGTTCATCGACAGC
GAGGCCCAGCTCGATGCCGATGTCAAGGCTCTGTCCATCCTCTCCGACCACCCCGAGCTGTACCCTGACTTTGTT
GCTCTTGGCTGCACAACCCACCTCGTCAGTCTTCTCGCCCACGACAATACCGACATCGCCATCGACGCCCTGGAG
ATTATGGGCGAGCTGACGGACGAGGACGTCGCCGCCGACGACAGCCAATGGGATGCTTTGGTTGACGCTCTGCTT
GAGGCCGACCTGATCGGACTACTCGTCTCCAACCTGGCTCGCCTGGACGAAGCCGATGAGGCCGACCGCAGCGGC
GTCTACTATGCTCTCGGTATTGTTGAGAATCTCTGCTCGCGTTCGACGACGGCCACCCGCATCGGAGCCCATGAC
GGTCTCCTTGGCTGGTTGCTGCTGCGCATCCAGCGCAAGGAGCAGCCTATCGCCGTCTCCCAGAACAAGCAGTAC
GCCGCCGAGATTCTCGCCATCCTTGCCCAGTCTTCGGCCGAGACTCGCCGCCAGATGGCCGGCCACGATGCCATC
GATGTCATGCTGCAGCTAGTTGCGCCCTACCGGAAAAGCGACCCGGACAAGGGCGGCGAGGAGGAAGAGTATATG
GAGAACCTCTTCGAGGCCCTCACCTGCCTCGTCGACGAGCCGTCGGGCAAGGTCAAGTTCATCGAGGCCGAAGGT
GTCGAGCTCTGCCTCATCATGTTCAAAGAGGGCAAGCGGAGCAAGGCCCCAGCCCTTCGCCTCATGGACCATGCC
ACGAGCGGCGCCACTGCCGCCGCCGTTGACGTCTGCGTCAAGCTCGTGGACGCCGGCGGCCTGAGGCCCCTCTTT
ACCCTCTTCGTCAAAAAGAGCCGGGACCAACGCTTGCTGGGTCACATGCTCGGCGTGCTGACGTCTATGCTGCGC
TTGCTGCCCGCCGGCTCGGCCGAGAGGATCCGCACCCTGGCCAAGTTCGTGGAGAAGGATTACGAGAAGACGGCG
AAGCTGGTGCAGCTGCACGCCGACTTTGGCGCTCGCGTCGCGCGAGCCGAGGCCCAACATCGTCAGGACGCTGCC
AATGCCGATGACGAGGACCCGGCCAAAGCCGAGGTCGAGCTGTTGTCGCGCCGGCTCGACGCGGGGCTCTTCGCC
TTGCAGCAGGTGGACGTCTTATTGGCCTGGCTGGTGGCCGAGGATGGCGGAGCTAGGAAACGGATCCAGAAGCTG
CTGGCGGAGCGGGACGAGAATTTGGATACCATGGCGGCGACTATCAAGGAGCAGCGGGAGGCTTTAGATACCACC
GAGGAGGACAGTCGGGATATGAGCGACATGTTAGATACACTACTGGAGTTATTGCGATAG
Gene >Ophio5|2671
ATGGCTAGCGTCGACGACATCTTCAAGGTCCGTCTCTTCGAATACGGAAGAATCAGCCTGCGCTTCTCTTTCCTC
CGCCTAACCCGGTCTCACCGCTCAGAATGTCGGCCTGCCCAGCAAGCGGAAACGAGATGCCATCACCGACCCAAG
TTTGTCCTTTCTTTGTCTCCACTCGACGCCGCCACTCAGATTTCTGTCTTTCACTGACTCGGATGACTCCGGCTT
CGTCTCGCAGACGAAATCTACAAATCCAGCAAGCTCGCGGCCTCAAGCCAACGACACCGCAACCAAGACGACTCC
AATGCTGGCAGCCATGCTGCCGACGATGACGACGACCTCGAGGCCGGCCCCGCGCCCCCGCCGCAACAACCGGAG
GCCGAGGACGTCGGCGACGATGATGAGGGCCGTTTCTTTGGAGGCGGCATATCCGCCCAAGAGTCCGAGATGCTC
GACTTCGTAGCCGGCGCAGGGGAGGACGCGGACCAAAGTCCCGAAAAGATCGACGCCGCTTGGATGCGCAGGACG
GCCCAGAACTTGGAGAAGCGCATCGTCACAAACACCCAGCTCCGCGCCAAGCACGAAGGCGAACCGCAAAAGTTC
ATCGACAGCGAGGCCCAGCTCGATGCCGATGTCAAGGCTCTGTCCATCCTCTCCGACCACCCCGAGCTGTACCCT
GACTTTGTTGCTCTTGGCTGCACAACCCACCTCGTCAGTCTTCTCGCCCACGACAATACCGACATCGCCATCGAC
GCCCTGGAGATTATGGGCGAGCTGACGGACGAGGACGTCGCCGCCGACGACAGCCAATGGGATGCTTTGGTTGAC
GCTCTGCTTGAGGCCGACCTGATCGGACTACTCGTCTCCAACCTGGCTCGCCTGGACGAAGCCGATGAGGCCGAC
CGCAGCGGCGTCTACTATGCTCTCGGTATTGTTGAGAATCTCTGCTCGCGTTCGACGACGGCCACCCGCATCGGA
GCCCATGACGGTCTCCTTGGCTGGTTGCTGCTGCGCATCCAGCGCAAGGAGCAGCCTATCGCCGTCTCCCAGAAC
AAGCAGTACGCCGCCGAGATTCTCGCCATCCTTGCCCAGTCTTCGGCCGAGACTCGCCGCCAGATGGCCGGCCAC
GATGCCATCGATGTCATGCTGCAGCTAGTTGCGCCCTACCGGAAAAGCGACCCGGACAAGGGCGGCGAGGAGGAA
GAGTATATGGAGAACCTCTTCGAGGCCCTCACCTGCCTCGTCGACGAGCCGTCGGGCAAGGTCAAGTTCATCGAG
GCCGAAGGTGTCGAGCTCTGCCTCATCATGTTCAAAGAGGGCAAGCGGAGCAAGGCCCCAGCCCTTCGCCTCATG
GACCATGCCACGAGCGGCGCCACTGCCGCCGCCGTTGACGTCTGCGTCAAGCTCGTGGACGCCGGCGGCCTGAGG
CCCCTCTTTACCCTCTTCGTCAAAAAGAGCCGGGACCAACGCTTGCTGGGTCACATGCTCGGCGTGCTGACGTCT
ATGCTGCGCTTGCTGCCCGCCGGCTCGGCCGAGAGGATCCGCACCCTGGCCAAGTTCGTGGAGAAGGATTACGAG
AAGACGGCGAAGCTGGTGCAGCTGCACGCCGACTTTGGCGCTCGCGTCGCGCGAGCCGAGGCCCAACATCGTCAG
GACGCTGCCAATGCCGATGACGAGGACCCGGCCAAAGCCGAGGTCGAGCTGTTGTCGCGCCGGCTCGACGCGGGG
CTCTTCGCCTTGCAGCAGGTGGACGTCTTATTGGCCTGGCTGGTGGCCGAGGATGGCGGAGCTAGGAAACGGATC
CAGAAGCTGCTGGCGGAGCGGGACGAGAATTTGGATACCATGGCGGCGACTATCAAGGAGCAGCGGGAGGCTTTA
GATACCACCGAGGAGGACAGTCGGGATATGAGCGACATGTTAGATACACTACTGGAGTTATTGCGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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