© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|2663 |
| Gene name | |
| Location | scaffold_216:8725..9730 |
| Strand | + |
| Gene length (bp) | 1005 |
| Transcript length (bp) | 858 |
| Coding sequence length (bp) | 855 |
| Protein length (aa) | 285 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 46 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 27 | 49 | 22 |
| 2 | 59 | 76 | 17 |
| 3 | 89 | 111 | 22 |
| 4 | 131 | 153 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|2663 MSHQATPVVDPPQTRKEIDVLQTPAWVLGVRIAQSVLSLLILALAATIATRNYIDESGLALAVALMTWLAITYMT LTERLPSLRTGYHVVAVLALDGLLVVLWLAAFAALAARRALFWGYTAIEGLTSATAGLGSLEWILFIITFVWGLV SFIQGRKQGRFPLNGFGVSTTEDCPMESKTGSAQPAQPPAPTQSLHPTQSPYTPPSPSPYTPPQQSPYSDDALPH AQGGGGGAVVAYGSPSPVYGFHQQQQQQQPYRQPQGSELPAQELPFSTTSAHAGSPTNHA |
| Coding | >Ophio5|2663 ATGAGCCACCAAGCAACTCCCGTCGTGGACCCGCCACAGACACGAAAAGAAATAGACGTACTGCAGACACCAGCG TGGGTGTTGGGTGTGCGCATCGCCCAGTCGGTTCTCTCTCTCCTCATTCTTGCGCTCGCGGCGACGATAGCGACG CGAAACTATATAGACGAGTCTGGACTCGCGCTGGCTGTTGCGCTCATGACTTGGCTGGCGATAACATATATGACG CTGACCGAACGGCTTCCGTCCCTCCGTACGGGCTATCACGTCGTCGCCGTGCTAGCTCTCGACGGGCTTCTGGTC GTGCTATGGCTCGCTGCGTTTGCGGCACTGGCGGCGCGGAGGGCCCTGTTCTGGGGGTATACAGCCATCGAGGGC CTGACGTCGGCCACGGCCGGCCTCGGGTCTTTGGAGTGGATTCTATTTATTATCACCTTTGTCTGGGGCCTCGTT AGCTTTATACAAGGCCGTAAGCAGGGCCGCTTCCCCCTCAACGGCTTCGGCGTGTCAACGACGGAGGACTGTCCG ATGGAATCGAAGACAGGCTCAGCTCAGCCAGCGCAGCCACCGGCGCCGACGCAGAGCCTACATCCGACGCAAAGC CCGTACACGCCCCCGTCGCCGAGCCCCTACACGCCACCGCAACAGTCGCCATACTCGGATGACGCCCTGCCCCAT GCCCAAGGTGGAGGAGGCGGCGCCGTGGTAGCCTACGGGTCGCCGAGTCCGGTCTACGGGTTTCATCAGCAGCAG CAGCAGCAGCAGCCGTACAGACAGCCCCAGGGCAGTGAACTTCCCGCGCAGGAGCTGCCATTCAGCACGACGTCT GCCCACGCCGGCTCTCCGACGAATCATGCT |
| Transcript | >Ophio5|2663 ATGAGCCACCAAGCAACTCCCGTCGTGGACCCGCCACAGACACGAAAAGAAATAGACGTACTGCAGACACCAGCG TGGGTGTTGGGTGTGCGCATCGCCCAGTCGGTTCTCTCTCTCCTCATTCTTGCGCTCGCGGCGACGATAGCGACG CGAAACTATATAGACGAGTCTGGACTCGCGCTGGCTGTTGCGCTCATGACTTGGCTGGCGATAACATATATGACG CTGACCGAACGGCTTCCGTCCCTCCGTACGGGCTATCACGTCGTCGCCGTGCTAGCTCTCGACGGGCTTCTGGTC GTGCTATGGCTCGCTGCGTTTGCGGCACTGGCGGCGCGGAGGGCCCTGTTCTGGGGGTATACAGCCATCGAGGGC CTGACGTCGGCCACGGCCGGCCTCGGGTCTTTGGAGTGGATTCTATTTATTATCACCTTTGTCTGGGGCCTCGTT AGCTTTATACAAGGCCGTAAGCAGGGCCGCTTCCCCCTCAACGGCTTCGGCGTGTCAACGACGGAGGACTGTCCG ATGGAATCGAAGACAGGCTCAGCTCAGCCAGCGCAGCCACCGGCGCCGACGCAGAGCCTACATCCGACGCAAAGC CCGTACACGCCCCCGTCGCCGAGCCCCTACACGCCACCGCAACAGTCGCCATACTCGGATGACGCCCTGCCCCAT GCCCAAGGTGGAGGAGGCGGCGCCGTGGTAGCCTACGGGTCGCCGAGTCCGGTCTACGGGTTTCATCAGCAGCAG CAGCAGCAGCAGCCGTACAGACAGCCCCAGGGCAGTGAACTTCCCGCGCAGGAGCTGCCATTCAGCACGACGTCT GCCCACGCCGGCTCTCCGACGAATCATGCTTGA |
| Gene | >Ophio5|2663 ATGAGCCACCAAGCAACTCCCGTCGTGGACCCGCCACAGACACGAAAAGAAATAGACGTACTGCAGACACCAGCG TGGGTGTTGGGTGTGCGCATCGCCCAGTCGGTTCTCTCTCTCCTCATTCTTGCGCTCGCGGCGACGATAGCGACG CGAAACTATATAGACGAGTCTGGACTCGCGCTGGCTGTTGTTCGTTCTCACCTCCCTTTCTTCCCCTTGTTTTTC GCCACAGGGACGTTCAAGTCAGTAGACGGATGGGGCGAAGAGAACTAACGCTGTTGCTCAGGCGCTCATGACTTG GCTGGCGATAACATATATGACGCTGACCGAACGGCTTCCGTCCCTCCGTACGGGCTATCACGTCGTCGCCGTGCT AGCTCTCGACGGGCTTCTGGTCGTGCTATGGCTCGCTGCGTTTGCGGCACTGGCGGCGCGGAGGGCCCTGTTCTG GGGGTATACAGCCATCGAGGGCCTGACGTCGGCCACGGCCGGCCTCGGGTCTTTGGAGTGGTAGGTGGAAGACTC TGGCTGATAGATGGGTGCAGCTAACAGTGTTGAAGGATTCTATTTATTATCACCTTTGTCTGGGGCCTCGTTAGC TTTATACAAGGCCGTAAGCAGGGCCGCTTCCCCCTCAACGGCTTCGGCGTGTCAACGACGGAGGACTGTCCGATG GAATCGAAGACAGGCTCAGCTCAGCCAGCGCAGCCACCGGCGCCGACGCAGAGCCTACATCCGACGCAAAGCCCG TACACGCCCCCGTCGCCGAGCCCCTACACGCCACCGCAACAGTCGCCATACTCGGATGACGCCCTGCCCCATGCC CAAGGTGGAGGAGGCGGCGCCGTGGTAGCCTACGGGTCGCCGAGTCCGGTCTACGGGTTTCATCAGCAGCAGCAG CAGCAGCAGCCGTACAGACAGCCCCAGGGCAGTGAACTTCCCGCGCAGGAGCTGCCATTCAGCACGACGTCTGCC CACGCCGGCTCTCCGACGAATCATGCTTGA |