Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2653
Gene name
Locationscaffold_215:21679..22654
Strand-
Gene length (bp)975
Transcript length (bp)975
Coding sequence length (bp)972
Protein length (aa) 324

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 29 51 22
2 66 88 22
3 97 119 22
4 134 156 22
5 177 199 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2653
MIVFISIALYNVLELNFLIANTFKKYQGLYFWSLIVATWGIALNAIGYLLRILQSDHSGYGHSTIILVGWCTMVT
GQSLVLYSRLHFVLHNTTVLRGILILIIVDAIWLGVPVIVFVYGSNSDKSKLFIGPYAIFERIQLCVFTVQELII
SGFYIVETSKTLKLQRRVGLAPLDARRGMAHLILANILIVLLDVSVLVLEFSGNYDIQTAWKPLVYSIKLKVEFS
VLNRLVEFSQHMRTGSLAKMGSDTDKGASLGGMTMAASESPTEARYSVHVGTSQSHEINVNDNDEFCVVKTTDVY
IDSSDNSASGGSSRDSTGLGTEPV
Coding >Ophio5|2653
ATGATCGTCTTCATCAGCATCGCTCTCTACAACGTGCTGGAGCTAAACTTCCTGATCGCCAACACCTTCAAGAAA
TACCAGGGCCTGTACTTTTGGAGCCTGATCGTGGCGACATGGGGAATCGCTCTCAACGCCATTGGCTACCTGCTG
CGCATCTTGCAGTCTGATCACTCAGGCTATGGCCATTCCACCATCATCCTCGTCGGCTGGTGCACCATGGTGACG
GGACAGTCGCTGGTCCTGTATTCACGCCTGCATTTCGTCTTGCACAACACGACGGTGCTGCGTGGCATCCTCATC
TTGATCATCGTAGATGCCATTTGGCTGGGCGTCCCCGTCATCGTCTTCGTTTACGGCTCCAACAGCGACAAGTCC
AAGCTTTTTATCGGGCCGTATGCCATCTTCGAGAGGATCCAGCTGTGCGTCTTCACGGTGCAGGAACTCATCATC
TCCGGCTTCTATATCGTCGAGACATCCAAGACACTGAAGCTCCAGAGGCGTGTGGGTTTAGCGCCTCTCGACGCG
CGCCGTGGCATGGCCCATCTCATCCTGGCCAACATACTCATAGTCCTGCTCGATGTGAGCGTCCTGGTGCTCGAG
TTCAGCGGAAACTACGACATTCAGACGGCGTGGAAGCCGCTGGTGTACAGCATCAAGCTCAAGGTCGAGTTCAGT
GTACTGAACCGGCTCGTCGAGTTTTCACAGCACATGAGGACAGGGAGTCTAGCCAAGATGGGTTCGGACACGGAC
AAGGGCGCCTCTCTCGGCGGCATGACCATGGCCGCCTCCGAGTCGCCGACGGAAGCGCGATACAGCGTCCATGTC
GGCACGTCTCAGAGCCACGAGATCAACGTGAACGACAACGACGAATTCTGCGTTGTCAAGACCACCGACGTCTAC
ATCGATAGCTCAGACAACTCGGCTAGCGGCGGCAGCTCCCGCGACTCTACCGGCCTTGGCACCGAACCAGTA
Transcript >Ophio5|2653
ATGATCGTCTTCATCAGCATCGCTCTCTACAACGTGCTGGAGCTAAACTTCCTGATCGCCAACACCTTCAAGAAA
TACCAGGGCCTGTACTTTTGGAGCCTGATCGTGGCGACATGGGGAATCGCTCTCAACGCCATTGGCTACCTGCTG
CGCATCTTGCAGTCTGATCACTCAGGCTATGGCCATTCCACCATCATCCTCGTCGGCTGGTGCACCATGGTGACG
GGACAGTCGCTGGTCCTGTATTCACGCCTGCATTTCGTCTTGCACAACACGACGGTGCTGCGTGGCATCCTCATC
TTGATCATCGTAGATGCCATTTGGCTGGGCGTCCCCGTCATCGTCTTCGTTTACGGCTCCAACAGCGACAAGTCC
AAGCTTTTTATCGGGCCGTATGCCATCTTCGAGAGGATCCAGCTGTGCGTCTTCACGGTGCAGGAACTCATCATC
TCCGGCTTCTATATCGTCGAGACATCCAAGACACTGAAGCTCCAGAGGCGTGTGGGTTTAGCGCCTCTCGACGCG
CGCCGTGGCATGGCCCATCTCATCCTGGCCAACATACTCATAGTCCTGCTCGATGTGAGCGTCCTGGTGCTCGAG
TTCAGCGGAAACTACGACATTCAGACGGCGTGGAAGCCGCTGGTGTACAGCATCAAGCTCAAGGTCGAGTTCAGT
GTACTGAACCGGCTCGTCGAGTTTTCACAGCACATGAGGACAGGGAGTCTAGCCAAGATGGGTTCGGACACGGAC
AAGGGCGCCTCTCTCGGCGGCATGACCATGGCCGCCTCCGAGTCGCCGACGGAAGCGCGATACAGCGTCCATGTC
GGCACGTCTCAGAGCCACGAGATCAACGTGAACGACAACGACGAATTCTGCGTTGTCAAGACCACCGACGTCTAC
ATCGATAGCTCAGACAACTCGGCTAGCGGCGGCAGCTCCCGCGACTCTACCGGCCTTGGCACCGAACCAGTATAG
Gene >Ophio5|2653
ATGATCGTCTTCATCAGCATCGCTCTCTACAACGTGCTGGAGCTAAACTTCCTGATCGCCAACACCTTCAAGAAA
TACCAGGGCCTGTACTTTTGGAGCCTGATCGTGGCGACATGGGGAATCGCTCTCAACGCCATTGGCTACCTGCTG
CGCATCTTGCAGTCTGATCACTCAGGCTATGGCCATTCCACCATCATCCTCGTCGGCTGGTGCACCATGGTGACG
GGACAGTCGCTGGTCCTGTATTCACGCCTGCATTTCGTCTTGCACAACACGACGGTGCTGCGTGGCATCCTCATC
TTGATCATCGTAGATGCCATTTGGCTGGGCGTCCCCGTCATCGTCTTCGTTTACGGCTCCAACAGCGACAAGTCC
AAGCTTTTTATCGGGCCGTATGCCATCTTCGAGAGGATCCAGCTGTGCGTCTTCACGGTGCAGGAACTCATCATC
TCCGGCTTCTATATCGTCGAGACATCCAAGACACTGAAGCTCCAGAGGCGTGTGGGTTTAGCGCCTCTCGACGCG
CGCCGTGGCATGGCCCATCTCATCCTGGCCAACATACTCATAGTCCTGCTCGATGTGAGCGTCCTGGTGCTCGAG
TTCAGCGGAAACTACGACATTCAGACGGCGTGGAAGCCGCTGGTGTACAGCATCAAGCTCAAGGTCGAGTTCAGT
GTACTGAACCGGCTCGTCGAGTTTTCACAGCACATGAGGACAGGGAGTCTAGCCAAGATGGGTTCGGACACGGAC
AAGGGCGCCTCTCTCGGCGGCATGACCATGGCCGCCTCCGAGTCGCCGACGGAAGCGCGATACAGCGTCCATGTC
GGCACGTCTCAGAGCCACGAGATCAACGTGAACGACAACGACGAATTCTGCGTTGTCAAGACCACCGACGTCTAC
ATCGATAGCTCAGACAACTCGGCTAGCGGCGGCAGCTCCCGCGACTCTACCGGCCTTGGCACCGAACCAGTATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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