Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2627
Gene name
Locationscaffold_213:28673..30101
Strand-
Gene length (bp)1428
Transcript length (bp)1218
Coding sequence length (bp)1215
Protein length (aa) 405

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 66 0.5

Transmembrane Domains

Domain # Start End Length
1 33 52 19
2 67 89 22
3 145 167 22
4 198 220 22
5 233 255 22
6 265 287 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2627
MADPRIEEAIASGQVPSNITAAYLGRNRDSEGIGGIVLVTLLVIAVVVSRLLSRALVVKRLGLDDGLALTSLIIF
VPFAIVCTEMIRLGSGRPFTFRKLILPDEQFDMTQTLDTVSQLLYATTLVLCRASGLAFYHRICALYNEFLIIIK
FIFFIIFLGYLAQMSLIILHCMPVTTLWEPSPLGKFKCVSWIEVQVVSSTISLLSDLLVFGIPLAMLHVLKSMDR
KRKVQLSCIFFPGLIVVFISIARIALAIIWDWETDDDFIYAFLSLLVVEVSEIGVSLIAISLPGLRPLFDKYIMR
KSNNHDTPSPRSSVHHNTQATNFKLPRLSIDSLEKSGAAGFEVKTITSVKSPNRDSTAKKGNKATRADEESTMRG
ISVTSEFMIEEQDAQKPDWGTETGTALGQL
Coding >Ophio5|2627
ATGGCCGACCCCCGGATCGAAGAGGCCATCGCCTCGGGCCAGGTCCCGTCCAACATCACGGCCGCATACCTGGGC
CGAAACCGAGACTCGGAGGGCATCGGCGGAATCGTCCTCGTTACTCTTCTCGTCATCGCCGTCGTCGTCTCCCGG
TTACTGTCGCGGGCGTTGGTAGTCAAGCGGCTTGGGCTGGATGATGGTCTGGCCTTGACATCACTGATCATCTTC
GTTCCTTTTGCCATCGTCTGCACCGAGATGATCCGGCTTGGTTCCGGGAGACCGTTCACCTTCCGCAAGCTCATC
CTCCCGGATGAACAGTTCGACATGACGCAGACGCTCGACACGGTATCGCAGCTTCTTTACGCCACGACGCTGGTG
CTGTGCCGCGCCTCGGGTTTGGCCTTTTACCACCGTATCTGCGCGCTGTACAACGAGTTCCTCATCATCATCAAG
TTCATCTTCTTCATCATCTTTCTCGGCTACCTGGCGCAGATGAGCCTCATCATCCTGCACTGTATGCCCGTCACG
ACGCTCTGGGAGCCGTCTCCGTTGGGCAAGTTCAAGTGCGTGTCGTGGATCGAGGTTCAGGTCGTCAGCTCCACC
ATCTCGCTACTCTCCGATCTGCTGGTCTTTGGCATCCCCTTGGCTATGTTGCACGTCCTCAAGTCCATGGACAGG
AAACGCAAGGTCCAGCTCAGTTGCATATTCTTCCCGGGCCTTATCGTTGTTTTCATCTCTATTGCCCGCATCGCC
TTGGCCATCATCTGGGACTGGGAAACCGACGACGACTTCATCTACGCTTTCCTCTCGCTGCTCGTAGTCGAGGTC
TCCGAGATCGGTGTATCGTTGATTGCCATTTCACTTCCTGGACTGAGGCCGTTATTCGACAAGTACATTATGCGC
AAAAGCAACAATCACGACACCCCCTCTCCCCGATCCAGTGTCCACCACAACACCCAAGCCACAAACTTCAAGTTG
CCACGGCTCAGCATCGACTCGCTGGAAAAGAGCGGCGCGGCCGGATTCGAGGTCAAGACCATCACGTCCGTCAAG
TCTCCAAACCGAGACAGCACCGCAAAGAAGGGAAATAAGGCGACGAGAGCTGATGAGGAGTCGACCATGAGAGGC
ATCAGTGTCACTTCCGAGTTCATGATCGAGGAACAGGATGCCCAGAAGCCTGATTGGGGGACCGAGACTGGTACG
GCACTCGGACAACTC
Transcript >Ophio5|2627
ATGGCCGACCCCCGGATCGAAGAGGCCATCGCCTCGGGCCAGGTCCCGTCCAACATCACGGCCGCATACCTGGGC
CGAAACCGAGACTCGGAGGGCATCGGCGGAATCGTCCTCGTTACTCTTCTCGTCATCGCCGTCGTCGTCTCCCGG
TTACTGTCGCGGGCGTTGGTAGTCAAGCGGCTTGGGCTGGATGATGGTCTGGCCTTGACATCACTGATCATCTTC
GTTCCTTTTGCCATCGTCTGCACCGAGATGATCCGGCTTGGTTCCGGGAGACCGTTCACCTTCCGCAAGCTCATC
CTCCCGGATGAACAGTTCGACATGACGCAGACGCTCGACACGGTATCGCAGCTTCTTTACGCCACGACGCTGGTG
CTGTGCCGCGCCTCGGGTTTGGCCTTTTACCACCGTATCTGCGCGCTGTACAACGAGTTCCTCATCATCATCAAG
TTCATCTTCTTCATCATCTTTCTCGGCTACCTGGCGCAGATGAGCCTCATCATCCTGCACTGTATGCCCGTCACG
ACGCTCTGGGAGCCGTCTCCGTTGGGCAAGTTCAAGTGCGTGTCGTGGATCGAGGTTCAGGTCGTCAGCTCCACC
ATCTCGCTACTCTCCGATCTGCTGGTCTTTGGCATCCCCTTGGCTATGTTGCACGTCCTCAAGTCCATGGACAGG
AAACGCAAGGTCCAGCTCAGTTGCATATTCTTCCCGGGCCTTATCGTTGTTTTCATCTCTATTGCCCGCATCGCC
TTGGCCATCATCTGGGACTGGGAAACCGACGACGACTTCATCTACGCTTTCCTCTCGCTGCTCGTAGTCGAGGTC
TCCGAGATCGGTGTATCGTTGATTGCCATTTCACTTCCTGGACTGAGGCCGTTATTCGACAAGTACATTATGCGC
AAAAGCAACAATCACGACACCCCCTCTCCCCGATCCAGTGTCCACCACAACACCCAAGCCACAAACTTCAAGTTG
CCACGGCTCAGCATCGACTCGCTGGAAAAGAGCGGCGCGGCCGGATTCGAGGTCAAGACCATCACGTCCGTCAAG
TCTCCAAACCGAGACAGCACCGCAAAGAAGGGAAATAAGGCGACGAGAGCTGATGAGGAGTCGACCATGAGAGGC
ATCAGTGTCACTTCCGAGTTCATGATCGAGGAACAGGATGCCCAGAAGCCTGATTGGGGGACCGAGACTGGTACG
GCACTCGGACAACTCTGA
Gene >Ophio5|2627
ATGGCCGACCCCCGGATCGAAGAGGCCATCGCCTCGGGCCAGGTCCCGTCCAACATCACGGCCGCATACCTGGGC
CGAAACCGAGACTCGGAGGGCATCGGCGGAATCGTCCTCGTTACTCTTCTCGTCATCGCCGTCGTCGTCTCCCGG
TTACTGTCGCGGGCGTTGGTAGTCAAGCGGCTTGGGCTGGATGATGGTCTGGCCTTGACATCACTGGTGAGATGG
GTTGAGATGGTTTTTTTCTTTACCGGTTCTGACAAGCGGAAAATCATTCTAGATCATCTTCGTTCCTTTTGCCAT
CGTCTGCACCGAGATGATCCGGCTTGGTTCCGGGAGACCGTTCACCTTCCGCAAGCTCATCCTCCCGGATGAACA
GTTCGACATGACGCAGACGCTCGACACGGTATCGCAGCTTCTTTACGCCACGACGCTGGTGCTGTGCCGCGCCTC
GGGTTTGGCCTTTTACCACCGTATCTGCGCGCTGTACAACGAGTTCCTCATCATCATCAAGTTCATCTTCTTCAT
CATCTTTCTCGGCTACCTGGCGCAGATGAGCCTCATCATCCTGCACTGTATGCCCGTCACGACGCTCTGGGAGCC
GTCTCCGTTGGGCAAGTTCAAGTGCGTGTCGTGGATCGAGGTTCAGGTCGTCAGCTCCACCATCTCGCTACTCTC
CGATCTGCTGGTCTTTGGCATCCCCTTGGCTATGTTGCACGTCCTCAAGTCCATGGACAGGAAACGCAAGGTCCA
GCTCAGTTGCATATTCTTCCCGGGCCTTATGTGAGTCCCCCCCGCCTCCGACTTTTCTCCTGCTCTAAGTGAAGA
CGTAAAGGAGGCCCCAAGATGGGGAGACTGACGACGGGTAAAATAAAAACGCAGCGTTGTTTTCATCTCTATTGC
CCGCATCGCCTTGGCCATCATCTGGGACTGTGAGTCTTACAAAACCGCACTTTTTGATATCTCGCTAAACTCGGC
AAAGGGGAAACCGACGACGACTTCATCTACGCTTTCCTCTCGCTGCTCGTAGTCGAGGTCTCCGAGATCGGTGTA
TCGTTGATTGCCATTTCACTTCCTGGACTGAGGCCGTTATTCGACAAGTACATTATGCGCAAAAGCAACAATCAC
GACACCCCCTCTCCCCGATCCAGTGTCCACCACAACACCCAAGCCACAAACTTCAAGTTGCCACGGCTCAGCATC
GACTCGCTGGAAAAGAGCGGCGCGGCCGGATTCGAGGTCAAGACCATCACGTCCGTCAAGTCTCCAAACCGAGAC
AGCACCGCAAAGAAGGGAAATAAGGCGACGAGAGCTGATGAGGAGTCGACCATGAGAGGCATCAGTGTCACTTCC
GAGTTCATGATCGAGGAACAGGATGCCCAGAAGCCTGATTGGGGGACCGAGACTGGTACGGCACTCGGACAACTC
TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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