Protein ID | Ophio5|2627 |
Gene name | |
Location | scaffold_213:28673..30101 |
Strand | - |
Gene length (bp) | 1428 |
Transcript length (bp) | 1218 |
Coding sequence length (bp) | 1215 |
Protein length (aa) | 405 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 66 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 33 | 52 | 19 |
2 | 67 | 89 | 22 |
3 | 145 | 167 | 22 |
4 | 198 | 220 | 22 |
5 | 233 | 255 | 22 |
6 | 265 | 287 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|2627 MADPRIEEAIASGQVPSNITAAYLGRNRDSEGIGGIVLVTLLVIAVVVSRLLSRALVVKRLGLDDGLALTSLIIF VPFAIVCTEMIRLGSGRPFTFRKLILPDEQFDMTQTLDTVSQLLYATTLVLCRASGLAFYHRICALYNEFLIIIK FIFFIIFLGYLAQMSLIILHCMPVTTLWEPSPLGKFKCVSWIEVQVVSSTISLLSDLLVFGIPLAMLHVLKSMDR KRKVQLSCIFFPGLIVVFISIARIALAIIWDWETDDDFIYAFLSLLVVEVSEIGVSLIAISLPGLRPLFDKYIMR KSNNHDTPSPRSSVHHNTQATNFKLPRLSIDSLEKSGAAGFEVKTITSVKSPNRDSTAKKGNKATRADEESTMRG ISVTSEFMIEEQDAQKPDWGTETGTALGQL |
Coding | >Ophio5|2627 ATGGCCGACCCCCGGATCGAAGAGGCCATCGCCTCGGGCCAGGTCCCGTCCAACATCACGGCCGCATACCTGGGC CGAAACCGAGACTCGGAGGGCATCGGCGGAATCGTCCTCGTTACTCTTCTCGTCATCGCCGTCGTCGTCTCCCGG TTACTGTCGCGGGCGTTGGTAGTCAAGCGGCTTGGGCTGGATGATGGTCTGGCCTTGACATCACTGATCATCTTC GTTCCTTTTGCCATCGTCTGCACCGAGATGATCCGGCTTGGTTCCGGGAGACCGTTCACCTTCCGCAAGCTCATC CTCCCGGATGAACAGTTCGACATGACGCAGACGCTCGACACGGTATCGCAGCTTCTTTACGCCACGACGCTGGTG CTGTGCCGCGCCTCGGGTTTGGCCTTTTACCACCGTATCTGCGCGCTGTACAACGAGTTCCTCATCATCATCAAG TTCATCTTCTTCATCATCTTTCTCGGCTACCTGGCGCAGATGAGCCTCATCATCCTGCACTGTATGCCCGTCACG ACGCTCTGGGAGCCGTCTCCGTTGGGCAAGTTCAAGTGCGTGTCGTGGATCGAGGTTCAGGTCGTCAGCTCCACC ATCTCGCTACTCTCCGATCTGCTGGTCTTTGGCATCCCCTTGGCTATGTTGCACGTCCTCAAGTCCATGGACAGG AAACGCAAGGTCCAGCTCAGTTGCATATTCTTCCCGGGCCTTATCGTTGTTTTCATCTCTATTGCCCGCATCGCC TTGGCCATCATCTGGGACTGGGAAACCGACGACGACTTCATCTACGCTTTCCTCTCGCTGCTCGTAGTCGAGGTC TCCGAGATCGGTGTATCGTTGATTGCCATTTCACTTCCTGGACTGAGGCCGTTATTCGACAAGTACATTATGCGC AAAAGCAACAATCACGACACCCCCTCTCCCCGATCCAGTGTCCACCACAACACCCAAGCCACAAACTTCAAGTTG CCACGGCTCAGCATCGACTCGCTGGAAAAGAGCGGCGCGGCCGGATTCGAGGTCAAGACCATCACGTCCGTCAAG TCTCCAAACCGAGACAGCACCGCAAAGAAGGGAAATAAGGCGACGAGAGCTGATGAGGAGTCGACCATGAGAGGC ATCAGTGTCACTTCCGAGTTCATGATCGAGGAACAGGATGCCCAGAAGCCTGATTGGGGGACCGAGACTGGTACG GCACTCGGACAACTC |
Transcript | >Ophio5|2627 ATGGCCGACCCCCGGATCGAAGAGGCCATCGCCTCGGGCCAGGTCCCGTCCAACATCACGGCCGCATACCTGGGC CGAAACCGAGACTCGGAGGGCATCGGCGGAATCGTCCTCGTTACTCTTCTCGTCATCGCCGTCGTCGTCTCCCGG TTACTGTCGCGGGCGTTGGTAGTCAAGCGGCTTGGGCTGGATGATGGTCTGGCCTTGACATCACTGATCATCTTC GTTCCTTTTGCCATCGTCTGCACCGAGATGATCCGGCTTGGTTCCGGGAGACCGTTCACCTTCCGCAAGCTCATC CTCCCGGATGAACAGTTCGACATGACGCAGACGCTCGACACGGTATCGCAGCTTCTTTACGCCACGACGCTGGTG CTGTGCCGCGCCTCGGGTTTGGCCTTTTACCACCGTATCTGCGCGCTGTACAACGAGTTCCTCATCATCATCAAG TTCATCTTCTTCATCATCTTTCTCGGCTACCTGGCGCAGATGAGCCTCATCATCCTGCACTGTATGCCCGTCACG ACGCTCTGGGAGCCGTCTCCGTTGGGCAAGTTCAAGTGCGTGTCGTGGATCGAGGTTCAGGTCGTCAGCTCCACC ATCTCGCTACTCTCCGATCTGCTGGTCTTTGGCATCCCCTTGGCTATGTTGCACGTCCTCAAGTCCATGGACAGG AAACGCAAGGTCCAGCTCAGTTGCATATTCTTCCCGGGCCTTATCGTTGTTTTCATCTCTATTGCCCGCATCGCC TTGGCCATCATCTGGGACTGGGAAACCGACGACGACTTCATCTACGCTTTCCTCTCGCTGCTCGTAGTCGAGGTC TCCGAGATCGGTGTATCGTTGATTGCCATTTCACTTCCTGGACTGAGGCCGTTATTCGACAAGTACATTATGCGC AAAAGCAACAATCACGACACCCCCTCTCCCCGATCCAGTGTCCACCACAACACCCAAGCCACAAACTTCAAGTTG CCACGGCTCAGCATCGACTCGCTGGAAAAGAGCGGCGCGGCCGGATTCGAGGTCAAGACCATCACGTCCGTCAAG TCTCCAAACCGAGACAGCACCGCAAAGAAGGGAAATAAGGCGACGAGAGCTGATGAGGAGTCGACCATGAGAGGC ATCAGTGTCACTTCCGAGTTCATGATCGAGGAACAGGATGCCCAGAAGCCTGATTGGGGGACCGAGACTGGTACG GCACTCGGACAACTCTGA |
Gene | >Ophio5|2627 ATGGCCGACCCCCGGATCGAAGAGGCCATCGCCTCGGGCCAGGTCCCGTCCAACATCACGGCCGCATACCTGGGC CGAAACCGAGACTCGGAGGGCATCGGCGGAATCGTCCTCGTTACTCTTCTCGTCATCGCCGTCGTCGTCTCCCGG TTACTGTCGCGGGCGTTGGTAGTCAAGCGGCTTGGGCTGGATGATGGTCTGGCCTTGACATCACTGGTGAGATGG GTTGAGATGGTTTTTTTCTTTACCGGTTCTGACAAGCGGAAAATCATTCTAGATCATCTTCGTTCCTTTTGCCAT CGTCTGCACCGAGATGATCCGGCTTGGTTCCGGGAGACCGTTCACCTTCCGCAAGCTCATCCTCCCGGATGAACA GTTCGACATGACGCAGACGCTCGACACGGTATCGCAGCTTCTTTACGCCACGACGCTGGTGCTGTGCCGCGCCTC GGGTTTGGCCTTTTACCACCGTATCTGCGCGCTGTACAACGAGTTCCTCATCATCATCAAGTTCATCTTCTTCAT CATCTTTCTCGGCTACCTGGCGCAGATGAGCCTCATCATCCTGCACTGTATGCCCGTCACGACGCTCTGGGAGCC GTCTCCGTTGGGCAAGTTCAAGTGCGTGTCGTGGATCGAGGTTCAGGTCGTCAGCTCCACCATCTCGCTACTCTC CGATCTGCTGGTCTTTGGCATCCCCTTGGCTATGTTGCACGTCCTCAAGTCCATGGACAGGAAACGCAAGGTCCA GCTCAGTTGCATATTCTTCCCGGGCCTTATGTGAGTCCCCCCCGCCTCCGACTTTTCTCCTGCTCTAAGTGAAGA CGTAAAGGAGGCCCCAAGATGGGGAGACTGACGACGGGTAAAATAAAAACGCAGCGTTGTTTTCATCTCTATTGC CCGCATCGCCTTGGCCATCATCTGGGACTGTGAGTCTTACAAAACCGCACTTTTTGATATCTCGCTAAACTCGGC AAAGGGGAAACCGACGACGACTTCATCTACGCTTTCCTCTCGCTGCTCGTAGTCGAGGTCTCCGAGATCGGTGTA TCGTTGATTGCCATTTCACTTCCTGGACTGAGGCCGTTATTCGACAAGTACATTATGCGCAAAAGCAACAATCAC GACACCCCCTCTCCCCGATCCAGTGTCCACCACAACACCCAAGCCACAAACTTCAAGTTGCCACGGCTCAGCATC GACTCGCTGGAAAAGAGCGGCGCGGCCGGATTCGAGGTCAAGACCATCACGTCCGTCAAGTCTCCAAACCGAGAC AGCACCGCAAAGAAGGGAAATAAGGCGACGAGAGCTGATGAGGAGTCGACCATGAGAGGCATCAGTGTCACTTCC GAGTTCATGATCGAGGAACAGGATGCCCAGAAGCCTGATTGGGGGACCGAGACTGGTACGGCACTCGGACAACTC TGA |