Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|2621
Gene name
Location	scaffold_213:18147..19482
Strand	-
Gene length (bp)	1335
Transcript length (bp)	1335
Coding sequence length (bp)	1332
Protein length (aa)	444

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P32339\|HMX1_YEAST	Heme-binding protein HMX1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HMX1 PE=2 SV=3	16	181	1.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	417	439	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|2621 MSNPDLDALLQQGWPLTQSLNMATRHVHTRINKLIMSRLSMALPPRAEDATLYLMGLIHVTAMYEAVESSWQQVC DGEEEEEERCTRTVMRPAVGHLLQRLRLPGLMRTRRLRHDVFALSGWSDELVEERISDLVLGTQLVADFVDRLKG LVSLKPHVLVAYAHVLFMALFAGGKYIGARIEAAGVEFWESFRRGGGGGGGGHGAFHHHHHHHHHHHHHHHLLLH RHLPHLPPSNQPHPPDALPLRFFRFDTPQQGQDLKHEFKLILAESESLLTQTEKYDILQEAIYLFEYVGHLVSHL DTVCGALQPPLRRRSSAPSISSSSSSPSSPSLVSGFLAHGLGSRMRDSIAVTRQRWDHDYRQRGSPPPSDHASSL CPVAVASPLKPSDVDEDRVAASVKVVRFDKSSSAVDAARSPHVLLLMAAVLLFAAVVLSRWSLGTWLHD
Coding	>Ophio5\|2621 ATGTCGAATCCCGACCTCGACGCCCTACTACAACAAGGCTGGCCACTGACGCAAAGCCTCAACATGGCGACGCGG CACGTGCACACGCGAATCAACAAGCTGATCATGTCGCGACTTTCGATGGCGCTTCCACCACGGGCGGAGGATGCG ACTCTGTACCTGATGGGACTGATACACGTCACGGCCATGTACGAAGCGGTGGAATCGTCATGGCAGCAAGTCTGC GACGGCGAAGAAGAAGAAGAAGAAAGGTGCACAAGGACGGTGATGCGACCTGCTGTTGGTCATCTTCTCCAGCGA TTGCGTCTTCCTGGCTTGATGCGTACCCGTCGCTTGCGTCATGATGTGTTTGCCCTCTCGGGCTGGAGTGACGAG TTGGTGGAGGAGAGGATTTCGGATCTGGTCTTGGGTACGCAACTGGTGGCTGACTTTGTCGACAGGTTGAAGGGA CTGGTTAGCTTGAAGCCTCATGTTTTGGTCGCCTATGCTCATGTCCTCTTCATGGCGCTCTTTGCTGGCGGCAAG TATATCGGTGCCAGGATTGAGGCGGCCGGGGTGGAGTTTTGGGAGTCGTTTCGCAGGGGAGGAGGAGGAGGAGGA GGAGGACATGGTGCTTTCCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCTGCTTCTTCAC CGGCATCTTCCTCATCTCCCTCCGTCGAACCAACCACACCCCCCAGACGCCCTCCCGCTACGCTTCTTCCGCTTC GACACCCCCCAACAAGGCCAAGACCTCAAACACGAATTCAAGCTCATCCTCGCCGAGTCCGAATCGCTGCTGACC CAGACGGAAAAGTACGACATCCTCCAGGAAGCCATCTACCTATTCGAATACGTCGGCCACCTCGTCAGCCACCTC GACACCGTCTGCGGAGCCCTACAACCGCCACTCCGTCGACGCTCATCCGCTCCTTCAATCTCTTCTTCTTCTTCT TCTCCTTCTTCGCCTTCCCTCGTGTCCGGCTTCTTGGCCCATGGTCTTGGTTCGAGGATGCGTGATAGCATTGCT GTTACGCGTCAGCGTTGGGATCATGATTATCGTCAAAGGGGCTCGCCACCACCATCGGATCATGCTTCTTCGCTT TGCCCTGTTGCCGTTGCCTCTCCTCTCAAGCCGTCTGACGTGGACGAGGACCGTGTTGCTGCTTCCGTCAAGGTG GTGCGCTTTGACAAGTCTTCGTCGGCCGTCGATGCTGCTCGCTCACCCCATGTCTTACTCCTCATGGCTGCTGTT TTGCTCTTTGCTGCTGTCGTGCTTTCGCGCTGGAGTCTTGGCACTTGGTTGCATGAT
Transcript	>Ophio5\|2621 ATGTCGAATCCCGACCTCGACGCCCTACTACAACAAGGCTGGCCACTGACGCAAAGCCTCAACATGGCGACGCGG CACGTGCACACGCGAATCAACAAGCTGATCATGTCGCGACTTTCGATGGCGCTTCCACCACGGGCGGAGGATGCG ACTCTGTACCTGATGGGACTGATACACGTCACGGCCATGTACGAAGCGGTGGAATCGTCATGGCAGCAAGTCTGC GACGGCGAAGAAGAAGAAGAAGAAAGGTGCACAAGGACGGTGATGCGACCTGCTGTTGGTCATCTTCTCCAGCGA TTGCGTCTTCCTGGCTTGATGCGTACCCGTCGCTTGCGTCATGATGTGTTTGCCCTCTCGGGCTGGAGTGACGAG TTGGTGGAGGAGAGGATTTCGGATCTGGTCTTGGGTACGCAACTGGTGGCTGACTTTGTCGACAGGTTGAAGGGA CTGGTTAGCTTGAAGCCTCATGTTTTGGTCGCCTATGCTCATGTCCTCTTCATGGCGCTCTTTGCTGGCGGCAAG TATATCGGTGCCAGGATTGAGGCGGCCGGGGTGGAGTTTTGGGAGTCGTTTCGCAGGGGAGGAGGAGGAGGAGGA GGAGGACATGGTGCTTTCCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCTGCTTCTTCAC CGGCATCTTCCTCATCTCCCTCCGTCGAACCAACCACACCCCCCAGACGCCCTCCCGCTACGCTTCTTCCGCTTC GACACCCCCCAACAAGGCCAAGACCTCAAACACGAATTCAAGCTCATCCTCGCCGAGTCCGAATCGCTGCTGACC CAGACGGAAAAGTACGACATCCTCCAGGAAGCCATCTACCTATTCGAATACGTCGGCCACCTCGTCAGCCACCTC GACACCGTCTGCGGAGCCCTACAACCGCCACTCCGTCGACGCTCATCCGCTCCTTCAATCTCTTCTTCTTCTTCT TCTCCTTCTTCGCCTTCCCTCGTGTCCGGCTTCTTGGCCCATGGTCTTGGTTCGAGGATGCGTGATAGCATTGCT GTTACGCGTCAGCGTTGGGATCATGATTATCGTCAAAGGGGCTCGCCACCACCATCGGATCATGCTTCTTCGCTT TGCCCTGTTGCCGTTGCCTCTCCTCTCAAGCCGTCTGACGTGGACGAGGACCGTGTTGCTGCTTCCGTCAAGGTG GTGCGCTTTGACAAGTCTTCGTCGGCCGTCGATGCTGCTCGCTCACCCCATGTCTTACTCCTCATGGCTGCTGTT TTGCTCTTTGCTGCTGTCGTGCTTTCGCGCTGGAGTCTTGGCACTTGGTTGCATGATTGA
Gene	>Ophio5\|2621 ATGTCGAATCCCGACCTCGACGCCCTACTACAACAAGGCTGGCCACTGACGCAAAGCCTCAACATGGCGACGCGG CACGTGCACACGCGAATCAACAAGCTGATCATGTCGCGACTTTCGATGGCGCTTCCACCACGGGCGGAGGATGCG ACTCTGTACCTGATGGGACTGATACACGTCACGGCCATGTACGAAGCGGTGGAATCGTCATGGCAGCAAGTCTGC GACGGCGAAGAAGAAGAAGAAGAAAGGTGCACAAGGACGGTGATGCGACCTGCTGTTGGTCATCTTCTCCAGCGA TTGCGTCTTCCTGGCTTGATGCGTACCCGTCGCTTGCGTCATGATGTGTTTGCCCTCTCGGGCTGGAGTGACGAG TTGGTGGAGGAGAGGATTTCGGATCTGGTCTTGGGTACGCAACTGGTGGCTGACTTTGTCGACAGGTTGAAGGGA CTGGTTAGCTTGAAGCCTCATGTTTTGGTCGCCTATGCTCATGTCCTCTTCATGGCGCTCTTTGCTGGCGGCAAG TATATCGGTGCCAGGATTGAGGCGGCCGGGGTGGAGTTTTGGGAGTCGTTTCGCAGGGGAGGAGGAGGAGGAGGA GGAGGACATGGTGCTTTCCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCTGCTTCTTCAC CGGCATCTTCCTCATCTCCCTCCGTCGAACCAACCACACCCCCCAGACGCCCTCCCGCTACGCTTCTTCCGCTTC GACACCCCCCAACAAGGCCAAGACCTCAAACACGAATTCAAGCTCATCCTCGCCGAGTCCGAATCGCTGCTGACC CAGACGGAAAAGTACGACATCCTCCAGGAAGCCATCTACCTATTCGAATACGTCGGCCACCTCGTCAGCCACCTC GACACCGTCTGCGGAGCCCTACAACCGCCACTCCGTCGACGCTCATCCGCTCCTTCAATCTCTTCTTCTTCTTCT TCTCCTTCTTCGCCTTCCCTCGTGTCCGGCTTCTTGGCCCATGGTCTTGGTTCGAGGATGCGTGATAGCATTGCT GTTACGCGTCAGCGTTGGGATCATGATTATCGTCAAAGGGGCTCGCCACCACCATCGGATCATGCTTCTTCGCTT TGCCCTGTTGCCGTTGCCTCTCCTCTCAAGCCGTCTGACGTGGACGAGGACCGTGTTGCTGCTTCCGTCAAGGTG GTGCGCTTTGACAAGTCTTCGTCGGCCGTCGATGCTGCTCGCTCACCCCATGTCTTACTCCTCATGGCTGCTGTT TTGCTCTTTGCTGCTGTCGTGCTTTCGCGCTGGAGTCTTGGCACTTGGTTGCATGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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