Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2616
Gene name
Locationscaffold_213:10485..11449
Strand-
Gene length (bp)964
Transcript length (bp)849
Coding sequence length (bp)846
Protein length (aa) 282

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13398 Peptidase_M50B Peptidase M50B-like 4.3E-60 55 256

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 48 70 22
2 77 99 22
3 119 141 22
4 143 165 22
5 170 189 19
6 194 212 18
7 243 265 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2616
MAPRLLALEASQTTTTTTHLLSVRHDADQTTTSWLFARHLEHPSSSQQLTLGVIAVYVVAIAILWNVPYLRMVLW
PFKMLVIAFHEFGHAITAILTGGRVDSITLDPREGGVTQLRGGISFLTLPAGYLGSSLIGALLIFCGFNIVASKI
ASIVLGLCFILTLWWGKRDWLTIITVFLAVALLVACWFIQHAEALRFVVLFIGVMSSLYSVWDICDDLILRKVNS
SDASVFAKRYGGSSTCWGVIWAFVSVLVMAVGIVAGLAAFSQSSEQQQQDSKAFMPT
Coding >Ophio5|2616
ATGGCGCCTCGGCTTCTCGCCTTGGAAGCAAGCCAGACGACGACGACGACGACGCATCTTCTCTCCGTCCGGCAT
GATGCAGACCAGACGACGACGTCTTGGCTATTCGCGCGACATCTTGAGCATCCGTCGTCGTCGCAGCAGTTGACG
CTTGGCGTTATAGCTGTCTATGTGGTGGCCATTGCCATTTTGTGGAATGTGCCGTATCTGCGCATGGTTCTCTGG
CCCTTCAAGATGCTGGTCATCGCATTCCACGAATTCGGTCACGCCATCACCGCCATCTTGACCGGTGGCCGCGTC
GACTCCATCACCCTCGATCCACGAGAAGGCGGCGTGACGCAGCTCCGGGGTGGAATCAGCTTCCTCACTCTTCCC
GCCGGCTATCTGGGATCCTCGCTGATCGGCGCCCTGCTCATCTTCTGCGGCTTTAACATCGTCGCCTCGAAAATC
GCGAGCATCGTTCTTGGCCTATGCTTCATACTGACGCTGTGGTGGGGGAAACGCGATTGGTTGACCATCATTACC
GTCTTTCTAGCCGTCGCTTTGCTAGTTGCCTGTTGGTTCATTCAGCACGCCGAAGCTCTTCGCTTCGTCGTCCTC
TTCATTGGCGTTATGAGTTCGCTGTATAGCGTGTGGGATATTTGCGATGATTTGATCCTTCGCAAGGTGAACTCG
TCGGATGCCAGCGTCTTTGCGAAGCGCTATGGCGGCTCCTCGACCTGCTGGGGCGTCATCTGGGCCTTTGTGTCG
GTGCTGGTCATGGCTGTTGGAATCGTTGCCGGCTTGGCCGCTTTTTCGCAGTCCTCGGAGCAGCAGCAGCAGGAC
TCCAAGGCTTTTATGCCCACG
Transcript >Ophio5|2616
ATGGCGCCTCGGCTTCTCGCCTTGGAAGCAAGCCAGACGACGACGACGACGACGCATCTTCTCTCCGTCCGGCAT
GATGCAGACCAGACGACGACGTCTTGGCTATTCGCGCGACATCTTGAGCATCCGTCGTCGTCGCAGCAGTTGACG
CTTGGCGTTATAGCTGTCTATGTGGTGGCCATTGCCATTTTGTGGAATGTGCCGTATCTGCGCATGGTTCTCTGG
CCCTTCAAGATGCTGGTCATCGCATTCCACGAATTCGGTCACGCCATCACCGCCATCTTGACCGGTGGCCGCGTC
GACTCCATCACCCTCGATCCACGAGAAGGCGGCGTGACGCAGCTCCGGGGTGGAATCAGCTTCCTCACTCTTCCC
GCCGGCTATCTGGGATCCTCGCTGATCGGCGCCCTGCTCATCTTCTGCGGCTTTAACATCGTCGCCTCGAAAATC
GCGAGCATCGTTCTTGGCCTATGCTTCATACTGACGCTGTGGTGGGGGAAACGCGATTGGTTGACCATCATTACC
GTCTTTCTAGCCGTCGCTTTGCTAGTTGCCTGTTGGTTCATTCAGCACGCCGAAGCTCTTCGCTTCGTCGTCCTC
TTCATTGGCGTTATGAGTTCGCTGTATAGCGTGTGGGATATTTGCGATGATTTGATCCTTCGCAAGGTGAACTCG
TCGGATGCCAGCGTCTTTGCGAAGCGCTATGGCGGCTCCTCGACCTGCTGGGGCGTCATCTGGGCCTTTGTGTCG
GTGCTGGTCATGGCTGTTGGAATCGTTGCCGGCTTGGCCGCTTTTTCGCAGTCCTCGGAGCAGCAGCAGCAGGAC
TCCAAGGCTTTTATGCCCACGTGA
Gene >Ophio5|2616
ATGGCGCCTCGGCTTCTCGCCTTGGAAGCAAGCCAGACGACGACGACGACGACGCATCTTCTCTCCGTCCGGCAT
GATGCAGACCAGACGACGACGTCTTGGCTATTCGCGCGACATCTTGAGCATCCGTCGTCGTCGCAGCAGTTGACG
CTTGGCGTTATAGCTGTCTATGTGGTGGCCATTGCCATTTTGTGGAATGTGCCGTATCTGCGCATGGTTCTCTGG
CCCTTCAAGGTACGGGATATGCGGTTTTTTTTTTTTTTTTTGGCGCAAGGCTTCCCTCCCTCGTCTTGAAAATTA
TCTGTCAGATTGCTTATCCAACCTCTTTTTTTTTCTTTCTTTTTCTTAGATGCTGGTCATCGCATTCCACGAATT
CGGTCACGCCATCACCGCCATCTTGACCGGTGGCCGCGTCGACTCCATCACCCTCGATCCACGAGAAGGCGGCGT
GACGCAGCTCCGGGGTGGAATCAGCTTCCTCACTCTTCCCGCCGGCTATCTGGGATCCTCGCTGATCGGCGCCCT
GCTCATCTTCTGCGGCTTTAACATCGTCGCCTCGAAAATCGCGAGCATCGTTCTTGGCCTATGCTTCATACTGAC
GCTGTGGTGGGGGAAACGCGATTGGTTGACCATCATTACCGTCTTTCTAGCCGTCGCTTTGCTAGTTGCCTGTTG
GTTCATTCAGCACGCCGAAGCTCTTCGCTTCGTCGTCCTCTTCATTGGCGTTATGAGTTCGCTGTATAGCGTGTG
GGATATTTGCGATGATTTGATCCTTCGCAAGGTGAACTCGTCGGATGCCAGCGTCTTTGCGAAGCGCTATGGCGG
CTCCTCGACCTGCTGGGGCGTCATCTGGGCCTTTGTGTCGGTGCTGGTCATGGCTGTTGGAATCGTTGCCGGCTT
GGCCGCTTTTTCGCAGTCCTCGGAGCAGCAGCAGCAGGACTCCAAGGCTTTTATGCCCACGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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