Protein ID | Ophio5|2613 |
Gene name | |
Location | scaffold_213:3799..6999 |
Strand | + |
Gene length (bp) | 3200 |
Transcript length (bp) | 2841 |
Coding sequence length (bp) | 2838 |
Protein length (aa) | 946 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1941 | 0.1189 | 0.9142 | 0.1292 | 0.0604 | 0.0091 | 0.3413 | 0.2058 | 0.2687 | 0.0058 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 25 | 0.99962 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 1.20 | 0.23 | 2.16 |
CcL | In ants, during behavior modification | 29.55 | 13.93 | 45.17 |
CcD | In ants, recently dead | 152.86 | 55.62 | 250.09 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.000286 | yes |
SC16a | CcD | 0.000286 | yes |
CcL | CcD | 0.000286 | yes |
Orthofinder run ID | 4 |
Orthogroup | 28 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|2613 MSRHHPAFIFRVILCLLLSSGYILAVPLGSDDDTGATASANSSTAVSTRSVLLFKKSPKDEHGEGPPSRPPQGSR RPDSVSDDNYVRFLPSLPVPTNGAQSRRVGPVRRVTFAAVRIRHVPSRRNPPGPLRRMVAFMRRCLPANQHPEVE VWRGDLDDDDEEPSSSLDRHPTHHRLSFPQTQEEEPSTSVSEHSIPDDDSIPYDDEEPSTSASRHPNHHRIRIPQ IREPVLYFINDEDSLPTPDPDPPTTRMLPPPQPTSYSPEGLPEFEWWYTLPNRGNDAQRLPGDVHKPFQLIPKAG GCYKPLDGAIGSSLRIAGDHVKAEGVGHVPMVFGFPGAPGSGWYFSPLPEGTALQSNPGGASGASGQASSSSQAL AVTVANLAREIDAATVGSSGNTIAWDLMNALFDFIRPLSHGTDCRFMSVGQYIATYTPHLVEMLLQLFRAHLDKA SSKGPPSKRSADGNLSELRGRMCDREPSSDAVLETGLYINCAPSAEDPSESSLESASMMLGNWSLSAVCDVFPRA LQNPGPMPTIDIDCGLGEKDDAPSPSEGPSDVYLCINNHFNLPCTSVVAPLGQCVAVPSSYINNVTSLRPSVAAG DCSFYTEPGCQGGKFASRHPGIDLYQVGHLSSFNDKVRSFQCGLTHEPSVGTSGMKHWEWSKKTQKKLCSHFDQL SLGFQLGDSGGDGTYDTLKLQFIGETAAMHTIAQGPSAGFHEWHRIDLKRIFNVDKIDINRIRLVRIAERATSAN YGGDGWRFQGMKFRARCATSGIMVEHNKFASINKDLQIHNSYGGSVWTDRDYSAWEGFVNVEDWVATPPCSHFKA LDAVIRMSDKYWSGTSNDLYIKIGQGRFQLAHEPERNEVSPLSVDVKKAFNTDKVAFNDLKSVTIESQGGHDQAL PSEIQLKAICDSQQEMAVRYEQSIQVWIPDGGSWTHEITAQDWKRI |
Coding | >Ophio5|2613 ATGAGCCGTCACCACCCTGCCTTCATCTTTCGCGTCATCCTTTGTCTTCTTCTATCGTCTGGCTACATTTTGGCC GTTCCCCTGGGCTCCGATGATGATACGGGTGCCACTGCATCAGCAAATTCGAGCACCGCTGTCAGTACTCGATCG GTTCTGTTGTTCAAGAAATCACCCAAGGACGAGCACGGAGAGGGTCCCCCTTCACGGCCTCCTCAGGGCTCGAGG CGTCCGGACTCGGTTTCAGATGACAATTATGTCCGTTTTCTTCCATCATTACCCGTCCCAACAAACGGTGCCCAG TCTCGACGAGTTGGTCCCGTACGTCGTGTGACGTTTGCGGCAGTTAGAATCAGACATGTTCCCTCTCGAAGAAAT CCTCCTGGTCCGCTGCGTCGCATGGTAGCCTTTATGCGAAGATGTCTCCCCGCGAACCAGCACCCTGAAGTGGAA GTTTGGAGGGGCGATCTGGACGACGACGACGAGGAACCATCATCAAGTCTTGACCGACATCCAACTCACCATCGC CTCAGCTTTCCTCAGACTCAAGAGGAGGAACCATCAACAAGTGTTTCCGAGCATTCAATTCCCGATGACGACTCA ATTCCCTATGACGACGAGGAACCATCAACAAGTGCTTCCCGGCATCCAAATCACCATCGGATTAGAATTCCTCAG ATTCGAGAGCCGGTTCTATACTTTATCAATGATGAAGACTCTTTGCCGACCCCCGACCCCGACCCGCCCACTACC AGGATGCTGCCGCCCCCTCAGCCGACTTCTTACTCGCCCGAGGGCCTTCCTGAGTTTGAATGGTGGTATACTTTG CCCAACCGCGGTAACGACGCGCAGCGCCTTCCAGGTGATGTCCACAAGCCCTTTCAGCTGATCCCGAAAGCCGGC GGATGCTATAAGCCTCTTGATGGCGCTATCGGATCAAGTTTACGGATTGCCGGAGATCATGTCAAGGCTGAAGGC GTCGGTCATGTTCCCATGGTCTTTGGCTTTCCAGGAGCACCCGGATCAGGATGGTATTTCTCACCATTACCGGAA GGGACCGCACTTCAGAGCAATCCTGGGGGGGCTTCGGGTGCAAGTGGTCAAGCCAGCAGCAGCTCACAAGCCCTC GCTGTTACCGTGGCCAACTTGGCGAGAGAGATTGATGCCGCGACAGTAGGCAGTTCAGGAAACACGATTGCGTGG GACTTGATGAATGCCCTATTCGATTTCATTCGCCCCTTATCCCATGGCACAGACTGCCGCTTCATGTCAGTCGGA CAATACATAGCGACCTATACACCGCATTTGGTGGAAATGCTCTTGCAACTCTTCCGCGCCCACCTCGACAAAGCT TCCTCCAAAGGTCCTCCCAGCAAAAGGTCAGCAGATGGGAATCTGAGTGAATTGAGAGGTAGAATGTGTGATCGA GAGCCGAGCTCCGACGCAGTTCTCGAGACCGGCCTCTACATCAACTGCGCCCCTTCAGCAGAGGATCCTTCTGAG TCTTCACTGGAATCTGCGTCTATGATGTTGGGCAATTGGTCCCTGAGCGCAGTCTGTGATGTGTTTCCGAGGGCC TTGCAAAATCCCGGACCGATGCCCACCATCGACATAGACTGCGGCTTGGGGGAAAAAGACGATGCCCCGAGCCCG TCCGAGGGGCCTTCTGACGTCTATCTTTGCATCAACAATCACTTCAATCTGCCCTGCACCAGCGTCGTAGCTCCT CTCGGGCAGTGCGTCGCCGTCCCAAGCTCCTACATCAACAACGTGACCTCGCTGAGGCCAAGTGTAGCTGCCGGC GATTGTTCTTTTTACACTGAGCCCGGCTGTCAAGGCGGCAAGTTTGCCTCCCGTCACCCAGGCATTGATCTTTAC CAAGTCGGCCATCTATCAAGTTTCAACGACAAGGTTCGGTCTTTCCAATGCGGCCTGACTCACGAGCCAAGTGTG GGAACAAGCGGGATGAAGCATTGGGAGTGGTCCAAGAAAACGCAGAAGAAACTCTGCTCTCATTTCGATCAGCTA TCCCTGGGATTTCAGCTGGGCGACAGCGGAGGGGATGGAACCTATGATACTCTGAAGCTGCAGTTCATCGGCGAG ACGGCAGCAATGCACACCATCGCACAAGGTCCCAGCGCAGGATTCCACGAGTGGCACCGGATTGATCTCAAGAGA ATATTCAACGTCGACAAGATTGACATCAATCGAATTCGATTAGTCCGCATCGCGGAGAGGGCAACCAGCGCCAAT TATGGCGGAGACGGATGGAGATTCCAAGGCATGAAGTTCAGAGCACGATGCGCCACCTCCGGAATCATGGTAGAG CACAACAAATTTGCCTCAATCAATAAAGACTTGCAGATCCACAACAGCTACGGAGGCTCGGTCTGGACGGACAGG GACTACTCGGCCTGGGAGGGCTTCGTCAACGTTGAGGATTGGGTGGCGACGCCTCCTTGCAGCCATTTCAAGGCA CTCGATGCTGTCATTCGGATGAGCGACAAGTATTGGTCGGGTACAAGCAATGACCTGTACATCAAAATCGGTCAA GGTCGCTTCCAACTCGCTCATGAACCAGAGCGGAATGAGGTGTCCCCGCTCAGCGTCGACGTGAAGAAGGCGTTT AACACGGACAAGGTTGCCTTCAATGACCTGAAGAGTGTCACCATTGAAAGTCAAGGGGGCCATGACCAGGCCCTT CCCAGTGAAATACAACTCAAAGCAATCTGTGACAGTCAGCAAGAGATGGCAGTCCGCTATGAGCAATCAATCCAG GTCTGGATTCCCGACGGCGGATCGTGGACTCACGAGATCACAGCCCAAGATTGGAAGCGGATC |
Transcript | >Ophio5|2613 ATGAGCCGTCACCACCCTGCCTTCATCTTTCGCGTCATCCTTTGTCTTCTTCTATCGTCTGGCTACATTTTGGCC GTTCCCCTGGGCTCCGATGATGATACGGGTGCCACTGCATCAGCAAATTCGAGCACCGCTGTCAGTACTCGATCG GTTCTGTTGTTCAAGAAATCACCCAAGGACGAGCACGGAGAGGGTCCCCCTTCACGGCCTCCTCAGGGCTCGAGG CGTCCGGACTCGGTTTCAGATGACAATTATGTCCGTTTTCTTCCATCATTACCCGTCCCAACAAACGGTGCCCAG TCTCGACGAGTTGGTCCCGTACGTCGTGTGACGTTTGCGGCAGTTAGAATCAGACATGTTCCCTCTCGAAGAAAT CCTCCTGGTCCGCTGCGTCGCATGGTAGCCTTTATGCGAAGATGTCTCCCCGCGAACCAGCACCCTGAAGTGGAA GTTTGGAGGGGCGATCTGGACGACGACGACGAGGAACCATCATCAAGTCTTGACCGACATCCAACTCACCATCGC CTCAGCTTTCCTCAGACTCAAGAGGAGGAACCATCAACAAGTGTTTCCGAGCATTCAATTCCCGATGACGACTCA ATTCCCTATGACGACGAGGAACCATCAACAAGTGCTTCCCGGCATCCAAATCACCATCGGATTAGAATTCCTCAG ATTCGAGAGCCGGTTCTATACTTTATCAATGATGAAGACTCTTTGCCGACCCCCGACCCCGACCCGCCCACTACC AGGATGCTGCCGCCCCCTCAGCCGACTTCTTACTCGCCCGAGGGCCTTCCTGAGTTTGAATGGTGGTATACTTTG CCCAACCGCGGTAACGACGCGCAGCGCCTTCCAGGTGATGTCCACAAGCCCTTTCAGCTGATCCCGAAAGCCGGC GGATGCTATAAGCCTCTTGATGGCGCTATCGGATCAAGTTTACGGATTGCCGGAGATCATGTCAAGGCTGAAGGC GTCGGTCATGTTCCCATGGTCTTTGGCTTTCCAGGAGCACCCGGATCAGGATGGTATTTCTCACCATTACCGGAA GGGACCGCACTTCAGAGCAATCCTGGGGGGGCTTCGGGTGCAAGTGGTCAAGCCAGCAGCAGCTCACAAGCCCTC GCTGTTACCGTGGCCAACTTGGCGAGAGAGATTGATGCCGCGACAGTAGGCAGTTCAGGAAACACGATTGCGTGG GACTTGATGAATGCCCTATTCGATTTCATTCGCCCCTTATCCCATGGCACAGACTGCCGCTTCATGTCAGTCGGA CAATACATAGCGACCTATACACCGCATTTGGTGGAAATGCTCTTGCAACTCTTCCGCGCCCACCTCGACAAAGCT TCCTCCAAAGGTCCTCCCAGCAAAAGGTCAGCAGATGGGAATCTGAGTGAATTGAGAGGTAGAATGTGTGATCGA GAGCCGAGCTCCGACGCAGTTCTCGAGACCGGCCTCTACATCAACTGCGCCCCTTCAGCAGAGGATCCTTCTGAG TCTTCACTGGAATCTGCGTCTATGATGTTGGGCAATTGGTCCCTGAGCGCAGTCTGTGATGTGTTTCCGAGGGCC TTGCAAAATCCCGGACCGATGCCCACCATCGACATAGACTGCGGCTTGGGGGAAAAAGACGATGCCCCGAGCCCG TCCGAGGGGCCTTCTGACGTCTATCTTTGCATCAACAATCACTTCAATCTGCCCTGCACCAGCGTCGTAGCTCCT CTCGGGCAGTGCGTCGCCGTCCCAAGCTCCTACATCAACAACGTGACCTCGCTGAGGCCAAGTGTAGCTGCCGGC GATTGTTCTTTTTACACTGAGCCCGGCTGTCAAGGCGGCAAGTTTGCCTCCCGTCACCCAGGCATTGATCTTTAC CAAGTCGGCCATCTATCAAGTTTCAACGACAAGGTTCGGTCTTTCCAATGCGGCCTGACTCACGAGCCAAGTGTG GGAACAAGCGGGATGAAGCATTGGGAGTGGTCCAAGAAAACGCAGAAGAAACTCTGCTCTCATTTCGATCAGCTA TCCCTGGGATTTCAGCTGGGCGACAGCGGAGGGGATGGAACCTATGATACTCTGAAGCTGCAGTTCATCGGCGAG ACGGCAGCAATGCACACCATCGCACAAGGTCCCAGCGCAGGATTCCACGAGTGGCACCGGATTGATCTCAAGAGA ATATTCAACGTCGACAAGATTGACATCAATCGAATTCGATTAGTCCGCATCGCGGAGAGGGCAACCAGCGCCAAT TATGGCGGAGACGGATGGAGATTCCAAGGCATGAAGTTCAGAGCACGATGCGCCACCTCCGGAATCATGGTAGAG CACAACAAATTTGCCTCAATCAATAAAGACTTGCAGATCCACAACAGCTACGGAGGCTCGGTCTGGACGGACAGG GACTACTCGGCCTGGGAGGGCTTCGTCAACGTTGAGGATTGGGTGGCGACGCCTCCTTGCAGCCATTTCAAGGCA CTCGATGCTGTCATTCGGATGAGCGACAAGTATTGGTCGGGTACAAGCAATGACCTGTACATCAAAATCGGTCAA GGTCGCTTCCAACTCGCTCATGAACCAGAGCGGAATGAGGTGTCCCCGCTCAGCGTCGACGTGAAGAAGGCGTTT AACACGGACAAGGTTGCCTTCAATGACCTGAAGAGTGTCACCATTGAAAGTCAAGGGGGCCATGACCAGGCCCTT CCCAGTGAAATACAACTCAAAGCAATCTGTGACAGTCAGCAAGAGATGGCAGTCCGCTATGAGCAATCAATCCAG GTCTGGATTCCCGACGGCGGATCGTGGACTCACGAGATCACAGCCCAAGATTGGAAGCGGATCTGA |
Gene | >Ophio5|2613 ATGAGCCGTCACCACCCTGCCTTCATCTTTCGCGTCATCCTTTGTCTTCTTCTATCGTCTGGCTACATTTTGGCC GTTCCCCTGGGCTCCGATGATGATACGGGTGCCACTGCATCAGCAAATTCGAGCACCGCTGTCAGTACTCGATCG GTTCTGTTGTTCAAGAAATCACCCAAGGACGAGCACGGAGAGGGTCCCCCTTCACGGCCTCCTCAGGGCTCGAGG CGTCCGGACTCGGTTTCAGATGACAATTATGTCCGTTTTCTTCCATCATTACCCGTCCCAACAAACGGTGCCCAG TCTCGACGAGTTGGTCCCGTACGTCGTGTGACGTTTGCGGCAGTTAGAATCAGACATGTTCCCTCTCGAAGAAAT CCTCCTGGTCCGCTGCGTCGCATGGTAGCCTTTATGCGAAGATGTCTCCCCGCGAACCAGCACCCTGAAGTGGAA GTTTGGAGGGGCGATCTGGACGACGACGACGAGGAACCATCATCAAGTCTTGACCGACATCCAACTCACCATCGC CTCAGCTTTCCTCAGACTCAAGAGGAGGAACCATCAACAAGTGTTTCCGAGCATTCAATTCCCGATGACGACTCA ATTCCCTATGACGACGAGGAACCATCAACAAGTGCTTCCCGGCATCCAAATCACCATCGGATTAGAATTCCTCAG ATTCGAGAGCCGGTTCTATACTTTATCAATGATGAAGACTCTTTGCCGACCCCCGACCCCGACCCGCCCACTACC AGGATGCTGCCGCCCCCTCAGCCGACTTCTTACTCGCCCGAGGGCCTTCCTGAGTTTGAATGGTGGTATACTTTG CCCAACCGCGGTAACGACGCGCAGCGCCTTCCAGGTGATGTCCACAAGCCCTTTCAGCTGATCCCGAAAGCCGGC GGATGCTATAAGCCTCTTGATGGCGCTATCGGATCAAGTTTACGGATTGCCGGAGATCATGTCAAGGCTGAAGGC GTCGGTCATGTTCCCATGGTCTTTGGCTTTCCAGGAGCACCCGGATCAGGATGGTATTTCTCACCATTACCGGAA GGGACCGCACTTCAGAGCAATCCTGGGGGGGCTTCGGGTGCAAGTGGTCAAGCCAGCAGCAGCTCACAAGGTGCC CGCCCCCCCCTCATCTCTCTCCCAAGGCTACTCGTGTCATGCTCGTGCTCATGCTCATGCTCATGCTGACCTTTT TTTGTTTACATAGCCCTCGCTGTTACCGTGGCCAACTTGGCGAGAGAGATTGATGCCGCGACAGTAGGCAGTTCA GGAAACACGATTGCGTGGGACTTGATGAATGCCCTATTCGATTTCATTCGCCCCTTATCCCATGGCACAGACTGC CGCTTCATGTCAGTCGGACAATACATAGCGACCTATACACCGCATTTGGTGGAAATGCTCTTGCAACTCTTCCGC GCCCACCTCGACAAAGCTTCCTCCAAAGGTCCTCCCAGCAAAAGGTCAGCAGATGGGAATCTGAGTGAATGTAAA TGTCCCTCCCCCGGCTCGAAGCATGTTTTGATCAAACCCCAACTGATGATGATGGATAGTGAGAGGTAGAATGTG TGATCGAGAGCCGAGCTCCGACGCAGTTCTCGAGACCGGCCTCTACATCAACTGCGCCCCTTCAGCAGAGGATCC TTCTGAGTCTTCACTGGAATCTGCGTCTATGATGTTGGGCAATTGGTCCCTGAGCGCAGTCTGTGATGTGTTTCC GAGGGCCTTGCAAAATCCCGGACCGATGCCCACCATCGACATAGACTGCGGCTTGGGGGAAAAAGACGATGCCCC GAGCCCGTCCGAGGGGCCTTCTGACGTCTATCTTTGCATCAACAATCACTTCAATCTGCCCTGCACCAGCGTCGT AGCTCCTCTCGGGCAGTGCGGTCAGTAAACACACGACTTGGTTTTGTTTTCATATCGCTGCTGACAATGTGCCTC CTGCAGTCGCCGTCCCAAGCTCCTACATCAACAACGTGACCTCGCTGAGGCCAAGTGTAGCTGCCGGCGATTGTT CTTTTTACACGTAAGCCCCCCCCCCCCCCCCTTTTTTTTGTAGCAGCATTCAGGGGCTCACAGAGACGACAACCC AGTGAGCCCGGCTGTCAAGGCGGCAAGTTTGCCTCCCGTCACCCAGGCATTGATCTTTACCAAGTCGGCCATCTA TCAAGTTTCAACGACAAGGTTCGGTCTTTCCAATGCGGCCTGACTCACGAGCCAAGTGTGGGAACAAGCGGGATG AAGCATTGGGAGTGGTCCAAGAAAACGCAGAAGAAACTCTGCTCTCATTTCGATCAGCTATCCCTGGGATTTCAG CTGGGCGACAGCGGAGGGGATGGAACCTATGATACTCTGAAGCTGCAGTTCATCGGCGAGACGGCAGCAATGCAC ACCATCGCACAAGGTCCCAGCGCAGGATTCCACGAGTGGCACCGGATTGATCTCAAGAGAATATTCAACGTCGAC AAGATTGACATCAATCGAATTCGATTAGTCCGCATCGCGGAGAGGGCAACCAGCGCCAATTATGGCGGAGACGGA TGGAGATTCCAAGGCATGAAGTTCAGAGCACGATGCGCCACCTCCGGAATCATGGTAGAGCACAACAAATTTGCC TCAATCAATAAAGACTTGCAGATCCACAACAGCTACGGAGGCTCGGTCTGGACGGACAGGGACTACTCGGCCTGG GAGGGCTTCGTCAACGTTGAGGATTGGGTGGCGACGCCTCCTTGCAGCCATTTCAAGGCACTCGATGCTGTCATT CGGATGAGCGACAAGTATTGGTCGGGTACAAGCAATGACCTGTACATCAAAATCGGTCAAGGTCGCTTCCAACTC GCTCATGAACCAGAGCGGAATGAGGTGTCCCCGCTCAGCGTCGACGTGAAGAAGGCGTTTAACACGGACAAGGTT GCCTTCAATGACCTGAAGAGTGTCACCATTGAAAGTCAAGGGGGCCATGACCAGGCCCTTCCCAGTGGTGAGTTG CTGAAATGGCTTCTTCCCTCTCATCTGCTGCCAACATGACTTCTAACCCGGTTCTCATCCATACAGAAATACAAC TCAAAGCAATCTGTGACAGTCAGCAAGAGATGGCAGTCCGCTATGAGCAATCAATCCAGGTCTGGATTCCCGACG GCGGATCGTGGACTCACGAGATCACAGCCCAAGATTGGAAGCGGATCTGA |