Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2605
Gene name
Locationscaffold_212:9178..11016
Strand-
Gene length (bp)1838
Transcript length (bp)1611
Coding sequence length (bp)1608
Protein length (aa) 536

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01565 FAD_binding_4 FAD binding domain 1.2E-21 116 262

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|D4B1Z7|A2478_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 29 483 1.0E-60
sp|D4AS41|A7056_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 24 505 2.0E-52
sp|P08159|HDNO_ARTOX 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 116 293 7.0E-17
sp|Q9FZC6|FOX3_ARATH Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 119 296 5.0E-08
sp|Q33DQ2|THCAI_CANSA Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1 116 295 5.0E-08
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|D4B1Z7|A2478_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 29 483 1.0E-60
sp|D4AS41|A7056_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 24 505 2.0E-52
sp|P08159|HDNO_ARTOX 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 116 293 7.0E-17
sp|Q9FZC6|FOX3_ARATH Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 119 296 5.0E-08
sp|Q33DQ2|THCAI_CANSA Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1 116 295 5.0E-08
sp|Q9FZC4|FOX1_ARATH Flavin-dependent oxidoreductase FOX1 OS=Arabidopsis thaliana GN=FOX1 PE=2 SV=1 119 296 1.0E-07
sp|O22213|CKX1_ARATH Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana GN=CKX1 PE=1 SV=1 115 306 1.0E-07
sp|Q8GTB6|THCAS_CANSA Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1 116 295 3.0E-07
sp|Q67YU0|CKX5_ARATH Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana GN=CKX5 PE=2 SV=1 222 333 1.0E-06
sp|Q9FZC8|FOX5_ARATH Flavin-dependent oxidoreductase FOX5 OS=Arabidopsis thaliana GN=FOX5 PE=3 SV=1 119 296 1.0E-06
sp|A6P6V9|CBDAS_CANSA Cannabidiolic acid synthase OS=Cannabis sativa GN=CBDAS PE=1 SV=1 116 301 4.0E-06
sp|Q9FZC5|FOX2_ARATH Flavin-dependent oxidoreductase FOX2 OS=Arabidopsis thaliana GN=FOX2 PE=2 SV=1 119 285 5.0E-06
sp|A6P6W0|CASL1_CANSA Cannabidiolic acid synthase-like 1 OS=Cannabis sativa GN=CBDAS2 PE=2 SV=1 116 296 7.0E-06
sp|D4B1P2|A2372_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 107 293 7.0E-06
sp|Q796Y5|YGAK_BACSU Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 115 303 8.0E-06
[Show less]

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:1901265 nucleoside phosphate binding No
GO:0000166 nucleotide binding No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2605
MKPISSFCLLSSLTTAGCSLTANCKTLPGDRDWPSTTIWESLNSTLNGRLLAPPPPAAVCHTEQPLHNASACPSL
REAWTHSAWHSENPVSVMWDQFTNFSCLPEPSTPCSSRGYPAYVIDASTAEHVRVGINFAKEHNIRLIVKSSGHD
FIGRSVGPGALSIWTHHLDSIEFHPDQFELDGSRRLISGNAMTLGGGVEMYNAYKAADKYNQTLVGGGGKTVACG
GFISGGGHSFIAPHYGLAADNVLQMEVVTPSGHVLTVNEDRHPELFWALRGGGGSTFGVITKVTMSTHPSVKVTS
VNWMIVTDPQAPYLIDVISFVVSKIPYLMDEGLYGGNYVDHSLPNPVAAPGVLREVGGIMGKNLMLAVDKPNMVE
KMFEPINNTLNARWSGNVVLHLKVQEHPSFLAWFEINHDSSPVGRSRYLVSRLLDKQTLTGNEPTLRNALKTANE
PNGLLAFFAVAGKGVQNAKPRGGNAVHPAWRLSYVHAVATAEFPPLNKTAEQEAIEILDRSFQPLRDLTPNSGSK
NKRLTVSMSFN
Coding >Ophio5|2605
ATGAAACCCATCTCGTCGTTCTGTCTTCTCTCTAGCCTCACCACCGCCGGCTGTTCACTCACCGCAAACTGTAAA
ACCTTGCCAGGAGACCGTGATTGGCCTTCGACGACCATCTGGGAGAGCCTGAATAGCACTCTCAACGGACGCCTC
CTCGCTCCGCCCCCTCCGGCCGCTGTTTGTCACACCGAGCAGCCCTTACATAACGCGAGTGCATGCCCTAGTCTG
AGGGAAGCATGGACTCACAGCGCATGGCACTCAGAAAACCCAGTGTCTGTCATGTGGGACCAGTTCACCAACTTC
AGCTGTCTGCCTGAACCCAGTACCCCGTGCAGCAGTCGGGGTTACCCTGCCTATGTCATCGACGCATCGACCGCG
GAGCATGTCAGGGTTGGCATCAACTTTGCCAAAGAGCACAACATCAGGCTCATCGTCAAAAGCTCTGGCCACGAC
TTCATCGGCCGCTCCGTTGGCCCTGGGGCATTATCCATCTGGACACACCACCTGGACAGCATCGAGTTCCACCCA
GATCAATTCGAGCTCGACGGCTCACGGAGATTGATAAGTGGTAATGCCATGACGCTGGGCGGCGGAGTCGAAATG
TACAATGCTTATAAGGCTGCCGACAAGTACAACCAAACTCTTGTTGGCGGCGGGGGCAAAACTGTTGCCTGTGGC
GGCTTCATCTCAGGCGGCGGCCATTCCTTCATTGCACCACACTATGGCTTAGCTGCTGACAACGTCCTGCAAATG
GAGGTCGTTACTCCAAGTGGCCATGTTCTTACCGTTAACGAGGATCGTCATCCCGAGCTTTTCTGGGCCTTGAGA
GGAGGCGGTGGCTCAACCTTTGGCGTCATCACCAAAGTTACCATGTCCACCCACCCCAGCGTCAAGGTAACCTCT
GTGAACTGGATGATCGTCACTGATCCTCAGGCGCCTTATCTCATCGATGTCATCTCCTTCGTAGTCTCCAAGATT
CCTTATCTCATGGACGAGGGACTTTACGGGGGAAACTATGTCGACCACAGCCTTCCGAATCCCGTGGCAGCGCCT
GGTGTGCTCCGGGAGGTCGGCGGAATAATGGGCAAGAACTTGATGCTGGCTGTGGACAAGCCAAACATGGTAGAG
AAGATGTTCGAACCGATAAACAATACTCTCAATGCGAGATGGTCCGGAAACGTGGTGCTTCACCTAAAGGTACAG
GAACATCCCTCGTTCTTGGCCTGGTTCGAGATCAATCACGACTCAAGCCCGGTAGGAAGAAGTCGTTATCTTGTA
TCACGACTTCTGGACAAGCAGACACTCACAGGCAATGAACCGACGCTGCGAAATGCCCTGAAAACAGCCAATGAG
CCTAATGGCCTCTTGGCTTTCTTTGCCGTTGCCGGCAAGGGTGTCCAGAATGCAAAGCCGCGGGGAGGAAACGCT
GTTCATCCAGCTTGGCGCCTGTCTTATGTGCATGCTGTCGCCACCGCCGAGTTCCCACCATTGAACAAGACAGCC
GAGCAGGAGGCCATCGAGATCCTTGACAGATCATTCCAGCCACTGCGTGATTTGACGCCCAATTCGGGGTCGAAG
AACAAGCGGCTAACGGTTTCAATGTCTTTCAAC
Transcript >Ophio5|2605
ATGAAACCCATCTCGTCGTTCTGTCTTCTCTCTAGCCTCACCACCGCCGGCTGTTCACTCACCGCAAACTGTAAA
ACCTTGCCAGGAGACCGTGATTGGCCTTCGACGACCATCTGGGAGAGCCTGAATAGCACTCTCAACGGACGCCTC
CTCGCTCCGCCCCCTCCGGCCGCTGTTTGTCACACCGAGCAGCCCTTACATAACGCGAGTGCATGCCCTAGTCTG
AGGGAAGCATGGACTCACAGCGCATGGCACTCAGAAAACCCAGTGTCTGTCATGTGGGACCAGTTCACCAACTTC
AGCTGTCTGCCTGAACCCAGTACCCCGTGCAGCAGTCGGGGTTACCCTGCCTATGTCATCGACGCATCGACCGCG
GAGCATGTCAGGGTTGGCATCAACTTTGCCAAAGAGCACAACATCAGGCTCATCGTCAAAAGCTCTGGCCACGAC
TTCATCGGCCGCTCCGTTGGCCCTGGGGCATTATCCATCTGGACACACCACCTGGACAGCATCGAGTTCCACCCA
GATCAATTCGAGCTCGACGGCTCACGGAGATTGATAAGTGGTAATGCCATGACGCTGGGCGGCGGAGTCGAAATG
TACAATGCTTATAAGGCTGCCGACAAGTACAACCAAACTCTTGTTGGCGGCGGGGGCAAAACTGTTGCCTGTGGC
GGCTTCATCTCAGGCGGCGGCCATTCCTTCATTGCACCACACTATGGCTTAGCTGCTGACAACGTCCTGCAAATG
GAGGTCGTTACTCCAAGTGGCCATGTTCTTACCGTTAACGAGGATCGTCATCCCGAGCTTTTCTGGGCCTTGAGA
GGAGGCGGTGGCTCAACCTTTGGCGTCATCACCAAAGTTACCATGTCCACCCACCCCAGCGTCAAGGTAACCTCT
GTGAACTGGATGATCGTCACTGATCCTCAGGCGCCTTATCTCATCGATGTCATCTCCTTCGTAGTCTCCAAGATT
CCTTATCTCATGGACGAGGGACTTTACGGGGGAAACTATGTCGACCACAGCCTTCCGAATCCCGTGGCAGCGCCT
GGTGTGCTCCGGGAGGTCGGCGGAATAATGGGCAAGAACTTGATGCTGGCTGTGGACAAGCCAAACATGGTAGAG
AAGATGTTCGAACCGATAAACAATACTCTCAATGCGAGATGGTCCGGAAACGTGGTGCTTCACCTAAAGGTACAG
GAACATCCCTCGTTCTTGGCCTGGTTCGAGATCAATCACGACTCAAGCCCGGTAGGAAGAAGTCGTTATCTTGTA
TCACGACTTCTGGACAAGCAGACACTCACAGGCAATGAACCGACGCTGCGAAATGCCCTGAAAACAGCCAATGAG
CCTAATGGCCTCTTGGCTTTCTTTGCCGTTGCCGGCAAGGGTGTCCAGAATGCAAAGCCGCGGGGAGGAAACGCT
GTTCATCCAGCTTGGCGCCTGTCTTATGTGCATGCTGTCGCCACCGCCGAGTTCCCACCATTGAACAAGACAGCC
GAGCAGGAGGCCATCGAGATCCTTGACAGATCATTCCAGCCACTGCGTGATTTGACGCCCAATTCGGGGTCGAAG
AACAAGCGGCTAACGGTTTCAATGTCTTTCAACTAA
Gene >Ophio5|2605
ATGAAACCCATCTCGTCGTTCTGTCTTCTCTCTAGCCTCACCACCGCCGGCTGTTCACTCACCGCAAACTGTAAA
ACCTTGCCAGGAGACCGTGATTGGCCTTCGACGACCATCTGGGAGAGCCTGAATAGCACTCTCAACGGACGCCTC
CTCGCTCCGCCCCCTCCGGCCGCTGTTTGTCACACCGAGCAGCCCTTACATAACGCGAGTGCATGCCCTAGTCTG
AGGGAAGCATGGACTCACAGCGCATGGCACTCAGAAAACCCAGTGTCTGTCATGTGGGACCAGTTCACCAACTTC
AGCTGTCTGCCTGAACCCAGTACCCCGTGCAGCAGTCGGGGTTACCCTGCCTATGTCATCGACGCATCGACCGCG
GAGCATGTCAGGGTTGGCATCAACTTTGGTACGTCTACATATTCCTTCCAAGCATGGTAAAGAGACGATATCTGA
ATAGCGGGTAGCCAAAGAGCACAACATCAGGCTCATCGTCAAAAGCTCTGGCCACGACTTCATCGGCCGCTCCGT
TGGCCCTGGGGCATTATCCATCTGGACACACCACCTGGACAGCATCGAGTTCCACCCAGATCAATTCGAGCTCGA
CGGCTCACGGAGATTGATAAGTGGTAATGCCATGACGCTGGGCGGCGGAGTCGAAATGTACAATGCTTATAAGGC
TGCCGACAAGTACAACCAAACTCTTGTTGGCGGCGGGGGCAAAACTGTTGCCTGTGGCGGCTTCATCTCAGGCGG
CGGCCATTCCTTCATTGCACCACACTATGGCTTAGCTGCTGACAACGTCCTGCAAATGGAGGTCGTTACTCCAAG
TGGCCATGTTCTTACCGTTAACGAGGATCGTCATCCCGAGCTTTTCTGGGCCTTGAGAGGAGTACGTGCCCCATG
TAATTGTTGATCCATCCGTGACTAACGTATTCCATTGCGATTCAGGGCGGTGGCTCAACCTTTGGCGTCATCACC
AAAGTTACCATGTCCACCCACCCCAGCGTCAAGGTAACCTCTGTGAACTGGATGATCGTCACTGATCCTCAGGCG
CCTTATCTCATCGATGTCATCTCCTTCGTAGTCTCCAAGATTCCTTATCTCATGGACGAGGGACTTTACGGGGGA
AACTATGTCGACCACAGCCTTCCGAATCCCGTGGCAGCGCCTGGTGTGCTCCGGGAGGTCGGCGGAATAATGGGC
AAGAACTTGATGCTGGCTGTGGACAAGCCAAACATGGTAGAGAAGATGTTCGAACCGATAAACAATACTCTCAAT
GCGAGATGGTCCGGAAACGTGGTGCTTCACCTAAAGGTACAGGAACATCCCTCGTTCTTGGCCTGGTTCGAGATC
AATCACGACTCAAGCCCGGTAGGAAGAAGTCGTTATCTTGTATCACGACTTCTGGACAAGCAGACACTCACAGGC
AATGAACCGACGCTGCGAAATGCCCTGAAAACAGCCAATGAGCCTAATGGCCTCTTGGCTTTCTTTGCCGTTGCC
GGCAAGGGTGTCCAGAATGCAAAGCCGCGGGGAGGAAACGCTGTTCATCCAGCTTGGCGCCTGTCTTATGTGCAT
GCTGGTATAAATCTGTGTTCACCTAGGGGAGAAGTCGCATTGTCTGCTAACCGTCTTCGATAGTCGCCACCGCCG
AGTTCCCACCATTGAACAAGACAGCCGAGCAGGAGGCCATCGAGATCCTTGACAGATCATTCCAGCCACTGCGTG
ATTTGACGCCCAATTCGGGGTCGTACGTTAACGAGGTTTGGCCATCTCCAGTCTGTCTTAATATTTCCCTTAGGA
AGAACAAGCGGCTAACGGTTTCAATGTCTTTCAACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail