Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2593
Gene name
Locationscaffold_211:11117..12345
Strand-
Gene length (bp)1228
Transcript length (bp)1170
Coding sequence length (bp)1167
Protein length (aa) 389

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 316 338 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2593
MDSQSVQRARSNPALPLARRFDESWYEVSSQPSSSSISSIGDEIVTTGLHVSSPYNRRRRRLHPSTRASAPQQPT
ATHATEYEETESEEDRLLTSSGEKKTHNEDNDDSDADSDGGDNATALGRASDRTVFQPQPNAFSHPPSHVARRSH
STTGAAAPHPHGGFSRPSFSQRSQTRVHRNFMSPSSAREDNEAALRASLTTLLSCAAAARGLPKTREEAEEQRLA
SNGIEPSNQPVELKLVPESDLTGAVASTQAGSQPVRGAPRVSERSPSRMGGAAGDKPKRAVSAGRNPRATKKKRT
TAMAAAQDTLISPTLLTWVMSAGVVVLVSVVGFGAGYVMGREAGRQEALSASASGVNETTRCGRDVISSGGGLRR
LRWGAVGRRMVTQA
Coding >Ophio5|2593
ATGGACAGCCAGAGCGTACAACGGGCGAGGTCCAACCCAGCCCTGCCGCTTGCGCGCCGCTTTGACGAATCATGG
TACGAGGTGTCGTCGCAGCCCTCGTCCTCGTCTATTTCGAGCATCGGAGACGAGATTGTCACCACCGGTCTGCAC
GTCAGCAGCCCGTATAATCGTCGTCGACGCCGCCTGCATCCTTCCACCAGGGCCTCGGCGCCCCAGCAGCCGACG
GCGACGCACGCGACCGAGTACGAAGAGACGGAGAGCGAAGAAGACCGCCTCCTGACGAGCTCGGGCGAGAAGAAG
ACTCACAACGAGGACAATGACGACTCAGACGCCGACTCCGACGGCGGCGACAATGCTACCGCCCTTGGCCGAGCG
TCGGACCGAACTGTCTTCCAGCCGCAACCGAACGCTTTCTCCCACCCTCCGTCCCACGTCGCTCGGCGAAGCCAC
TCGACCACCGGTGCCGCCGCCCCGCATCCCCATGGCGGCTTCTCGCGGCCGTCTTTTTCTCAGCGGTCGCAGACG
AGAGTCCATCGCAATTTCATGTCGCCGTCTAGTGCCCGGGAGGACAATGAGGCGGCGCTGCGGGCGTCTCTGACG
ACGTTGCTGTCGTGCGCCGCTGCCGCGAGGGGTTTGCCCAAGACGAGGGAGGAGGCGGAGGAGCAGCGACTGGCA
AGTAACGGCATAGAGCCGAGTAACCAGCCTGTGGAGCTGAAGCTGGTCCCTGAATCGGATTTGACAGGGGCCGTC
GCGTCGACACAAGCTGGCTCACAACCGGTTCGCGGCGCGCCGAGGGTTTCGGAGCGATCGCCATCTCGGATGGGC
GGTGCGGCCGGCGACAAGCCGAAACGGGCCGTCTCGGCGGGGCGGAATCCCCGAGCGACGAAGAAGAAGAGGACG
ACGGCCATGGCGGCGGCCCAAGACACGTTGATCTCTCCGACGCTGCTGACGTGGGTCATGAGCGCCGGTGTCGTC
GTCCTCGTGTCAGTTGTCGGCTTCGGGGCCGGCTACGTGATGGGACGCGAGGCCGGGCGGCAAGAAGCGCTGTCG
GCGAGCGCGAGCGGCGTCAACGAGACGACGCGCTGCGGTCGGGACGTCATCAGCTCCGGCGGCGGTCTTCGGCGG
CTGAGATGGGGAGCTGTTGGCAGGAGGATGGTGACGCAGGCG
Transcript >Ophio5|2593
ATGGACAGCCAGAGCGTACAACGGGCGAGGTCCAACCCAGCCCTGCCGCTTGCGCGCCGCTTTGACGAATCATGG
TACGAGGTGTCGTCGCAGCCCTCGTCCTCGTCTATTTCGAGCATCGGAGACGAGATTGTCACCACCGGTCTGCAC
GTCAGCAGCCCGTATAATCGTCGTCGACGCCGCCTGCATCCTTCCACCAGGGCCTCGGCGCCCCAGCAGCCGACG
GCGACGCACGCGACCGAGTACGAAGAGACGGAGAGCGAAGAAGACCGCCTCCTGACGAGCTCGGGCGAGAAGAAG
ACTCACAACGAGGACAATGACGACTCAGACGCCGACTCCGACGGCGGCGACAATGCTACCGCCCTTGGCCGAGCG
TCGGACCGAACTGTCTTCCAGCCGCAACCGAACGCTTTCTCCCACCCTCCGTCCCACGTCGCTCGGCGAAGCCAC
TCGACCACCGGTGCCGCCGCCCCGCATCCCCATGGCGGCTTCTCGCGGCCGTCTTTTTCTCAGCGGTCGCAGACG
AGAGTCCATCGCAATTTCATGTCGCCGTCTAGTGCCCGGGAGGACAATGAGGCGGCGCTGCGGGCGTCTCTGACG
ACGTTGCTGTCGTGCGCCGCTGCCGCGAGGGGTTTGCCCAAGACGAGGGAGGAGGCGGAGGAGCAGCGACTGGCA
AGTAACGGCATAGAGCCGAGTAACCAGCCTGTGGAGCTGAAGCTGGTCCCTGAATCGGATTTGACAGGGGCCGTC
GCGTCGACACAAGCTGGCTCACAACCGGTTCGCGGCGCGCCGAGGGTTTCGGAGCGATCGCCATCTCGGATGGGC
GGTGCGGCCGGCGACAAGCCGAAACGGGCCGTCTCGGCGGGGCGGAATCCCCGAGCGACGAAGAAGAAGAGGACG
ACGGCCATGGCGGCGGCCCAAGACACGTTGATCTCTCCGACGCTGCTGACGTGGGTCATGAGCGCCGGTGTCGTC
GTCCTCGTGTCAGTTGTCGGCTTCGGGGCCGGCTACGTGATGGGACGCGAGGCCGGGCGGCAAGAAGCGCTGTCG
GCGAGCGCGAGCGGCGTCAACGAGACGACGCGCTGCGGTCGGGACGTCATCAGCTCCGGCGGCGGTCTTCGGCGG
CTGAGATGGGGAGCTGTTGGCAGGAGGATGGTGACGCAGGCGTGA
Gene >Ophio5|2593
ATGGACAGCCAGAGCGTACAACGGGCGAGGTCCAACCCAGCCCTGCCGCTTGCGCGCCGCTTTGACGGTTCGTCT
CCCTCCTCGGCCACTCGTCGGGGGCTGGCTGGCTGACGTCGTGCGCGCAGAATCATGGTACGAGGTGTCGTCGCA
GCCCTCGTCCTCGTCTATTTCGAGCATCGGAGACGAGATTGTCACCACCGGTCTGCACGTCAGCAGCCCGTATAA
TCGTCGTCGACGCCGCCTGCATCCTTCCACCAGGGCCTCGGCGCCCCAGCAGCCGACGGCGACGCACGCGACCGA
GTACGAAGAGACGGAGAGCGAAGAAGACCGCCTCCTGACGAGCTCGGGCGAGAAGAAGACTCACAACGAGGACAA
TGACGACTCAGACGCCGACTCCGACGGCGGCGACAATGCTACCGCCCTTGGCCGAGCGTCGGACCGAACTGTCTT
CCAGCCGCAACCGAACGCTTTCTCCCACCCTCCGTCCCACGTCGCTCGGCGAAGCCACTCGACCACCGGTGCCGC
CGCCCCGCATCCCCATGGCGGCTTCTCGCGGCCGTCTTTTTCTCAGCGGTCGCAGACGAGAGTCCATCGCAATTT
CATGTCGCCGTCTAGTGCCCGGGAGGACAATGAGGCGGCGCTGCGGGCGTCTCTGACGACGTTGCTGTCGTGCGC
CGCTGCCGCGAGGGGTTTGCCCAAGACGAGGGAGGAGGCGGAGGAGCAGCGACTGGCAAGTAACGGCATAGAGCC
GAGTAACCAGCCTGTGGAGCTGAAGCTGGTCCCTGAATCGGATTTGACAGGGGCCGTCGCGTCGACACAAGCTGG
CTCACAACCGGTTCGCGGCGCGCCGAGGGTTTCGGAGCGATCGCCATCTCGGATGGGCGGTGCGGCCGGCGACAA
GCCGAAACGGGCCGTCTCGGCGGGGCGGAATCCCCGAGCGACGAAGAAGAAGAGGACGACGGCCATGGCGGCGGC
CCAAGACACGTTGATCTCTCCGACGCTGCTGACGTGGGTCATGAGCGCCGGTGTCGTCGTCCTCGTGTCAGTTGT
CGGCTTCGGGGCCGGCTACGTGATGGGACGCGAGGCCGGGCGGCAAGAAGCGCTGTCGGCGAGCGCGAGCGGCGT
CAACGAGACGACGCGCTGCGGTCGGGACGTCATCAGCTCCGGCGGCGGTCTTCGGCGGCTGAGATGGGGAGCTGT
TGGCAGGAGGATGGTGACGCAGGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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