Protein ID | Ophio5|2573 |
Gene name | |
Location | scaffold_21:77163..78191 |
Strand | + |
Gene length (bp) | 1028 |
Transcript length (bp) | 951 |
Coding sequence length (bp) | 948 |
Protein length (aa) | 316 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.116 | 0.086 | 0.8904 | 0.1463 | 0.1565 | 0.013 | 0.0994 | 0.0862 | 0.0517 | 0.002 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 15 | 0.999533 |
Orthofinder run ID | 4 |
Orthogroup | 463 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|2573 MKFASILAFAATAMATEAGGVLGGGGGLLGTGLGGGSSNGGGSSSGGGGLLGNVGVGVGVGIGGNGRGTGIDNRG GGRNGNRGGNRGGNRGGNWGHGGNHGGVRGHGGNWGHGGRGGNWGHGGRGRNWGHGRGIGHGRRGYWRGGKFFND YYYGDDYYYDDYYKVAYFKDDYYKSGFYNKGFYGNVGYYDRDDYFKGSYKGYYKGELYGKGGYGYGGDYGYGKGG YGGDYGYGGDYGYGGDYGYGKGGYGGDYDFKDGGYGGICQRERYCCDKESKILGIFGDNYKSCEGGEWFCCDKGS KFGGFLEKGRNKCYRV |
Coding | >Ophio5|2573 ATGAAGTTCGCCAGCATCCTCGCCTTCGCGGCTACGGCCATGGCCACTGAGGCCGGTGGTGTTCTTGGTGGTGGC GGCGGTCTCCTCGGCACTGGCCTTGGTGGCGGAAGCTCCAACGGTGGTGGCAGCTCCAGCGGAGGCGGTGGCCTG CTGGGTAATGTCGGCGTCGGCGTCGGCGTCGGCATTGGCGGAAACGGTCGCGGAACCGGCATCGACAACCGTGGA GGTGGCCGTAACGGAAACCGTGGTGGAAACCGCGGTGGAAACCGCGGTGGCAACTGGGGTCACGGCGGAAACCAC GGCGGCGTCCGGGGACACGGAGGCAACTGGGGCCACGGAGGCCGAGGAGGCAACTGGGGACACGGAGGCCGTGGC CGCAACTGGGGTCACGGCCGTGGCATCGGACACGGTCGTCGTGGCTACTGGCGTGGTGGCAAGTTCTTCAACGAC TACTACTACGGCGACGACTACTACTACGATGACTACTACAAGGTCGCCTACTTCAAGGACGATTACTACAAGTCG GGCTTCTACAACAAGGGCTTCTACGGAAATGTCGGCTACTACGACCGGGACGACTACTTCAAGGGCTCCTACAAG GGCTACTACAAGGGTGAGCTGTACGGCAAGGGTGGCTACGGCTACGGTGGCGACTACGGCTACGGCAAGGGTGGC TATGGTGGTGATTACGGCTATGGCGGTGACTACGGCTACGGCGGTGATTACGGCTACGGCAAGGGTGGCTATGGC GGCGACTACGACTTCAAGGACGGTGGCTACGGCGGTATCTGCCAGCGTGAGCGTTACTGCTGCGACAAGGAGTCC AAAATTCTGGGTATCTTCGGCGACAACTACAAGTCTTGCGAGGGCGGCGAGTGGTTCTGTTGCGACAAGGGGTCC AAGTTTGGTGGTTTCCTTGAGAAGGGTCGCAACAAGTGCTACCGCGTC |
Transcript | >Ophio5|2573 ATGAAGTTCGCCAGCATCCTCGCCTTCGCGGCTACGGCCATGGCCACTGAGGCCGGTGGTGTTCTTGGTGGTGGC GGCGGTCTCCTCGGCACTGGCCTTGGTGGCGGAAGCTCCAACGGTGGTGGCAGCTCCAGCGGAGGCGGTGGCCTG CTGGGTAATGTCGGCGTCGGCGTCGGCGTCGGCATTGGCGGAAACGGTCGCGGAACCGGCATCGACAACCGTGGA GGTGGCCGTAACGGAAACCGTGGTGGAAACCGCGGTGGAAACCGCGGTGGCAACTGGGGTCACGGCGGAAACCAC GGCGGCGTCCGGGGACACGGAGGCAACTGGGGCCACGGAGGCCGAGGAGGCAACTGGGGACACGGAGGCCGTGGC CGCAACTGGGGTCACGGCCGTGGCATCGGACACGGTCGTCGTGGCTACTGGCGTGGTGGCAAGTTCTTCAACGAC TACTACTACGGCGACGACTACTACTACGATGACTACTACAAGGTCGCCTACTTCAAGGACGATTACTACAAGTCG GGCTTCTACAACAAGGGCTTCTACGGAAATGTCGGCTACTACGACCGGGACGACTACTTCAAGGGCTCCTACAAG GGCTACTACAAGGGTGAGCTGTACGGCAAGGGTGGCTACGGCTACGGTGGCGACTACGGCTACGGCAAGGGTGGC TATGGTGGTGATTACGGCTATGGCGGTGACTACGGCTACGGCGGTGATTACGGCTACGGCAAGGGTGGCTATGGC GGCGACTACGACTTCAAGGACGGTGGCTACGGCGGTATCTGCCAGCGTGAGCGTTACTGCTGCGACAAGGAGTCC AAAATTCTGGGTATCTTCGGCGACAACTACAAGTCTTGCGAGGGCGGCGAGTGGTTCTGTTGCGACAAGGGGTCC AAGTTTGGTGGTTTCCTTGAGAAGGGTCGCAACAAGTGCTACCGCGTCTAA |
Gene | >Ophio5|2573 ATGAAGTTCGCCAGCATCCTCGCCTTCGCGGCTACGGCCATGGCCACTGAGGCCGGTGGTGTTCTTGGTGGTGGC GGCGGTCTCCTCGGCACTGGCCTTGGTGGCGGAAGCTCCAACGGTGGTGGCAGCTCCAGCGGAGGCGGTGGCCTG CTGGGTAATGTCGGCGTCGGCGTCGGCGTCGGCATTGGCGGAAACGGTCGCGGAACCGGCATCGACAACCGTGGA GGTGGCCGTAACGGAAACCGTGGTGGAAACCGCGGTGGAAACCGCGGTGGCAACTGGGGTCACGGCGGAAACCAC GGCGGCGTCCGGGGACACGGAGGCAACTGGGGCCACGGAGGCCGAGGAGGCAACTGGGGACACGGAGGCCGTGGC CGCAACTGGGGTCACGGCCGTGGCATCGGACACGGTCGTCGTGGCTACTGGCGTGGTGGCAAGTTCTTCAACGAC TACTACTACGGCGACGACTACTACTACGATGACTACTACAAGGTCGCCTACTTCAAGGACGATTACTACAAGTCG GGCTTCTACAACAAGGGCTTCTACGGAAATGTCGGCTACTACGACCGGGACGACTACTTCAAGGGCTCCTACAAG GGCTACTACAAGGGTGAGCTGTACGGCAAGGGTGGCTACGGCTACGGTGGCGACTACGGCTACGGCAAGGGTGGC TATGGTGGTGATTACGGCTATGGCGGTGACTACGGCTACGGCGGTGATTACGGCTACGGCAAGGGTGGCTATGGC GGCGACTACGACTTCAAGGACGGTGGCTACGGCGGTATCTGCCAGCGTGAGCGTTACTGCTGCGACAAGGAGTCC AAAATTCTGGGTATCTTCGGCGACAACTACAAGTCTTGCGAGGGCGGCGAGTGGTTCTGTTGCGACAAGGGGTCC AAGTTTGTGAGTTCCCCCCCCCCCCCCCCCGACCTTCACCACTTCTCGCCTCTTGAATATTTGACTAATAGAGTT GACAACAGGGTGGTTTCCTTGAGAAGGGTCGCAACAAGTGCTACCGCGTCTAA |