Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2564
Gene name
Locationscaffold_21:59648..61600
Strand+
Gene length (bp)1952
Transcript length (bp)1608
Coding sequence length (bp)1605
Protein length (aa) 535

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 5.4E-53 49 508
PF00324 AA_permease Amino acid permease 3.0E-23 60 449

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 7 531 4.0E-67
sp|O74537|YCQ4_SCHPO Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 22 534 1.0E-42
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 20 524 4.0E-42
sp|Q09887|YC9D_SCHPO Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 32 523 1.0E-41
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 36 520 3.0E-39
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Swissprot ID Swissprot Description Start End E-value
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 7 531 4.0E-67
sp|O74537|YCQ4_SCHPO Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 22 534 1.0E-42
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 20 524 4.0E-42
sp|Q09887|YC9D_SCHPO Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 32 523 1.0E-41
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 36 520 3.0E-39
sp|Q9US40|YFZ1_SCHPO Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 8 529 4.0E-39
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 34 521 4.0E-38
sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 36 501 2.0E-36
sp|P32837|UGA4_YEAST GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 23 521 4.0E-35
sp|P36029|TPO5_YEAST Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 31 516 2.0E-31
sp|Q10087|YAO8_SCHPO Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 12 519 4.0E-31
sp|P53744|BIO5_YEAST 7-keto 8-aminopelargonic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIO5 PE=1 SV=1 23 512 2.0E-30
sp|O74248|GPT1_CANAX Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 32 529 1.0E-26
sp|Q9C0Z0|YKM2_SCHPO Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 31 519 1.0E-25
sp|O59813|YCT3_SCHPO Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 10 518 1.0E-24
sp|Q9UT18|THI9_SCHPO Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 16 514 2.0E-24
sp|P76037|PUUP_ECOLI Putrescine importer PuuP OS=Escherichia coli (strain K12) GN=puuP PE=1 SV=2 274 425 3.0E-09
sp|P0AA47|PLAP_ECOLI Low-affinity putrescine importer PlaP OS=Escherichia coli (strain K12) GN=plaP PE=1 SV=1 274 418 9.0E-07
sp|P0AA48|PLAP_ECO57 Low-affinity putrescine importer PlaP OS=Escherichia coli O157:H7 GN=plaP PE=3 SV=1 274 418 9.0E-07
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GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0055085 transmembrane transport Yes
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0110165 cellular anatomical entity No
GO:0008150 biological_process No
GO:0005215 transporter activity No
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.5

Transmembrane Domains

Domain # Start End Length
1 49 68 19
2 83 105 22
3 130 152 22
4 181 203 22
5 215 237 22
6 257 279 22
7 300 322 22
8 349 371 22
9 404 426 22
10 430 452 22
11 465 487 22
12 502 519 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2564
MSSPSAVSPSEDNGAVVGDSRQDAALLQARRDAQDLADLGHDQALSRKFSLWSMLALALCVLGTWTTFAQGLSSG
LVHGGPIAILWGLVLVALCNGCVAISLGELCSSMPTALGQADWISRLLSGRGARFASYLCAWLNTFGWWTLSASQ
VAFMTDFILSMRLMFIQDDAAAAAARDALPGWQRFLVYLAVTLLFTLINVVSCRRESLLPIISNSVGVGFIGLFV
AFVVALPVAVATRPGRHFQPASFVFAGWINRTGWPDGVTWFVGLVQSAYGLTAFDSVIHMAEEIPAPRRNVPRTM
WLAVASGAVSGFVFMVVCLFCIQDVDRILSPTSGFPFIEISQSTLGRNAAAVLIGLFILNGLGQGFGILTSASRL
TWSFARDGGLPLSQYWAHVDPRWRVPARALWLQASLIGLVGLLYLFASTVLQAVLSVSTIALTLSYAMPIAALLL
AGRGALPSGQFRLGPRLGPIANGVSLVYCAITTVFFFFPGSPNPSPGDMNYAIAVFGVMVVVALAFWLLEGPRKR
QSRRTAFVSV
Coding >Ophio5|2564
ATGTCCTCTCCGTCTGCCGTCTCCCCCTCGGAAGACAATGGCGCCGTCGTCGGAGATTCTCGGCAAGATGCCGCC
CTTCTCCAGGCCCGTCGCGACGCTCAAGACCTCGCCGACCTCGGCCACGATCAGGCCCTCAGCCGCAAGTTTAGC
CTCTGGAGTATGCTCGCCCTCGCCCTCTGCGTCCTCGGCACCTGGACCACGTTTGCTCAGGGCCTCAGCAGCGGC
CTCGTTCACGGCGGTCCCATCGCTATTCTTTGGGGCCTCGTCCTCGTCGCTCTGTGCAATGGCTGCGTCGCCATC
TCTCTCGGGGAGCTGTGTAGCAGCATGCCGACGGCACTGGGACAGGCAGATTGGATATCGCGTCTTCTTAGTGGC
CGTGGCGCCCGCTTCGCTTCCTATCTCTGCGCCTGGCTCAATACGTTTGGATGGTGGACGCTCAGTGCGTCACAG
GTGGCCTTCATGACCGACTTTATCTTATCCATGCGCCTCATGTTCATCCAAGATGATGCCGCTGCTGCTGCTGCT
AGAGACGCACTGCCCGGCTGGCAGCGGTTTCTCGTCTACCTGGCCGTCACGCTACTCTTCACTCTCATCAATGTC
GTTTCATGCCGTCGCGAGTCGCTGCTACCCATCATCAGCAACTCTGTGGGCGTCGGCTTCATCGGCCTCTTCGTC
GCCTTCGTCGTCGCACTGCCAGTCGCCGTCGCAACCCGTCCGGGCCGACATTTCCAGCCGGCCTCGTTTGTCTTC
GCCGGCTGGATCAACCGCACGGGCTGGCCAGACGGCGTGACTTGGTTCGTCGGCCTCGTTCAGAGCGCCTACGGC
TTGACGGCTTTCGACTCCGTCATCCACATGGCCGAGGAGATTCCCGCGCCTCGACGCAACGTTCCGCGCACAATG
TGGCTGGCCGTCGCTTCCGGCGCCGTCTCCGGCTTCGTCTTCATGGTCGTCTGCCTTTTCTGCATCCAGGACGTC
GATCGGATATTGTCCCCGACTTCGGGCTTCCCCTTTATCGAAATCAGCCAGTCGACGCTTGGTCGCAACGCCGCC
GCCGTCCTCATTGGCCTTTTCATCCTCAACGGCCTCGGACAGGGTTTCGGCATCCTGACGTCTGCCTCTCGTCTG
ACGTGGAGCTTCGCCCGCGATGGTGGCCTACCCCTGAGTCAGTACTGGGCACACGTCGACCCACGTTGGCGCGTG
CCCGCCCGCGCCCTCTGGCTACAGGCGTCCCTCATCGGTCTCGTCGGCCTGCTGTACCTGTTCGCCAGCACGGTT
CTACAGGCGGTGCTCAGCGTCAGCACCATTGCGCTGACGCTGTCGTATGCCATGCCCATCGCCGCCCTGCTGCTG
GCCGGACGAGGGGCTCTTCCGTCGGGTCAGTTCCGGCTGGGCCCTCGACTGGGACCCATCGCCAATGGTGTCTCG
CTCGTTTACTGCGCCATCACCACCGTCTTCTTCTTCTTTCCCGGCTCGCCGAACCCGTCACCCGGTGATATGAAC
TACGCAATCGCCGTCTTTGGCGTCATGGTCGTCGTAGCCCTCGCCTTTTGGCTCCTCGAGGGGCCAAGAAAGAGG
CAAAGCAGACGGACAGCCTTCGTCTCAGTA
Transcript >Ophio5|2564
ATGTCCTCTCCGTCTGCCGTCTCCCCCTCGGAAGACAATGGCGCCGTCGTCGGAGATTCTCGGCAAGATGCCGCC
CTTCTCCAGGCCCGTCGCGACGCTCAAGACCTCGCCGACCTCGGCCACGATCAGGCCCTCAGCCGCAAGTTTAGC
CTCTGGAGTATGCTCGCCCTCGCCCTCTGCGTCCTCGGCACCTGGACCACGTTTGCTCAGGGCCTCAGCAGCGGC
CTCGTTCACGGCGGTCCCATCGCTATTCTTTGGGGCCTCGTCCTCGTCGCTCTGTGCAATGGCTGCGTCGCCATC
TCTCTCGGGGAGCTGTGTAGCAGCATGCCGACGGCACTGGGACAGGCAGATTGGATATCGCGTCTTCTTAGTGGC
CGTGGCGCCCGCTTCGCTTCCTATCTCTGCGCCTGGCTCAATACGTTTGGATGGTGGACGCTCAGTGCGTCACAG
GTGGCCTTCATGACCGACTTTATCTTATCCATGCGCCTCATGTTCATCCAAGATGATGCCGCTGCTGCTGCTGCT
AGAGACGCACTGCCCGGCTGGCAGCGGTTTCTCGTCTACCTGGCCGTCACGCTACTCTTCACTCTCATCAATGTC
GTTTCATGCCGTCGCGAGTCGCTGCTACCCATCATCAGCAACTCTGTGGGCGTCGGCTTCATCGGCCTCTTCGTC
GCCTTCGTCGTCGCACTGCCAGTCGCCGTCGCAACCCGTCCGGGCCGACATTTCCAGCCGGCCTCGTTTGTCTTC
GCCGGCTGGATCAACCGCACGGGCTGGCCAGACGGCGTGACTTGGTTCGTCGGCCTCGTTCAGAGCGCCTACGGC
TTGACGGCTTTCGACTCCGTCATCCACATGGCCGAGGAGATTCCCGCGCCTCGACGCAACGTTCCGCGCACAATG
TGGCTGGCCGTCGCTTCCGGCGCCGTCTCCGGCTTCGTCTTCATGGTCGTCTGCCTTTTCTGCATCCAGGACGTC
GATCGGATATTGTCCCCGACTTCGGGCTTCCCCTTTATCGAAATCAGCCAGTCGACGCTTGGTCGCAACGCCGCC
GCCGTCCTCATTGGCCTTTTCATCCTCAACGGCCTCGGACAGGGTTTCGGCATCCTGACGTCTGCCTCTCGTCTG
ACGTGGAGCTTCGCCCGCGATGGTGGCCTACCCCTGAGTCAGTACTGGGCACACGTCGACCCACGTTGGCGCGTG
CCCGCCCGCGCCCTCTGGCTACAGGCGTCCCTCATCGGTCTCGTCGGCCTGCTGTACCTGTTCGCCAGCACGGTT
CTACAGGCGGTGCTCAGCGTCAGCACCATTGCGCTGACGCTGTCGTATGCCATGCCCATCGCCGCCCTGCTGCTG
GCCGGACGAGGGGCTCTTCCGTCGGGTCAGTTCCGGCTGGGCCCTCGACTGGGACCCATCGCCAATGGTGTCTCG
CTCGTTTACTGCGCCATCACCACCGTCTTCTTCTTCTTTCCCGGCTCGCCGAACCCGTCACCCGGTGATATGAAC
TACGCAATCGCCGTCTTTGGCGTCATGGTCGTCGTAGCCCTCGCCTTTTGGCTCCTCGAGGGGCCAAGAAAGAGG
CAAAGCAGACGGACAGCCTTCGTCTCAGTATAA
Gene >Ophio5|2564
ATGTCCTCTCCGTCTGCCGTCTCCCCCTCGGAAGACAATGGCGCCGTCGTCGGAGATTCTCGGCAAGATGCCGCC
CTTCTCCAGGCCCGTCGCGACGCTCAAGACCTCGCCGACCTCGGCCACGATCAGGCCCTCAGCCGCAAGTTTAGC
CTCTGGAGTATGCTCGCCCTCGCCCTCTGCGTCCTCGGCACCTGGACCACGTTTGCTCAGGGCCTCAGCAGCGGC
CTCGTTCACGGCGGTCCCATCGCTATTCTTTGGGGCCTCGTCCTCGTCGCTCTGTGCAATGGCTGCGTCGCCATC
TCTCTCGGGGAGCTGTGTAGCAGCATGCCGACGGCACTGGGACAGGCAGATTGGATATCGCGTCTTCTTAGTGGC
CGTGGCGCCCGCTTCGCTTCCTATCTCTGCGCCTGGCTCAATACGTTTGGATGGTGGACGCTCAGTGCGTCACAG
GTGGCCTTCATGACCGACTTTATCTTATCCATGCGCCTCATGTTCATCCAAGATGATGCCGCTGCTGCTGCTGCT
AGAGACGCACTGCCCGGCTGGCAGCGGTTTCTCGTCTACCTGGCCGTCACGCTACTCTTCACTCTCATCAATGTC
GTTTCATGCCGTCGCGAGTCGCTGCTACCCATCATCAGCAACTCTGTGGGCGTCGGCTTCATCGGCCTCTTCGTC
GCCTTCGTCGTCGCACTGCCAGTCGCCGTCGCAACCCGTCCGGGCCGACATTTCCAGCCGGCCTCGTTTGTCTTC
GCCGGCTGGATCAACCGCACGGGCTGGCCAGACGGCGTGACTTGGTTCGTCGGCCTCGTTCAGAGCGCCTACGGC
TTGACGGCTTTCGACTCCGTCATCCACATGGCCGAGGAGATTCCCGCGCCTCGACGCAACGTTCCGCGCACAATG
TGGCTGGCCGTCGCTTCCGGCGCCGTCTCCGGCTTCGTCTTCATGGTCGTCTGCCTTTTCTGCATCCAGGACGTC
GATCGGATATTGTCCCCGACTTCGGGCTTCCCCTTTATCGAAATCAGCCAGTCGACGCTTGGTCGCAACGCCGCC
GCCGTCCTCATTGGCCTTTTCATCCTCAACGGCCTCGGACAGGGTTTCGGCATCCTGACGTCTGCCTCTCGTCTG
ACGTGGAGCTTCGCCCGCGATGGTGGCCTACCCCTGAGTCAGTACTGGGCACACGTCGACCCACGTTGGCGCGTG
CCCGCCCGCGCCCTCTGGCTACAGGCGTCCCTCATCGGTCTCGTCGGCCTGCTGTACCTGTTCGCCAGCACGGTT
CTACAGGCGGTGCTCAGCGTCAGCACCATTGCGCTGACGCTGTCGTATGCCATGCCCATCGCCGCCCTGCTGCTG
GCCGGACGAGGGGCTCTTCCGTCGGGTCAGTTCCGGCTGGGCCCTCGACTGGGACCCATCGCCAATGGTGTCTCG
CTCGTTTACTGCGCCATCACCACCGTCTTCTTCTTCTTTCCCGGCTCGCCGAACCCGTCACCCGGTGATATGAAC
TACGCAATCGCCGTCTTTGGCGTCATGGTCGTCGTAGCCCTCGCCTTTTGGCTCCTCGAGGGGCGTCACTCCTAC
AAGCGACCCGCCGGCCATGTGCTATACGCTCAGGACCCGGTCGAGACGGTCGACGACGGTGATGGTAAAGGTTCG
GCGAAGAAGTTATAGCAAGAAGTACGAGCGGTATTCTCTTCTTCTTTCCCCCCTACTCTTTTTCCTCCCTTGAGC
AACGATTGAAACGATTTTGTACGTGGAAATGAGTTAGAGAGGCAAAGCAGACGGACAGGTGAGCAGGATTTTCAA
CACCATTTCTTCATTGTTTTTTCTGTGGCCTTTCCCCTTTCATGGTAGTCCATGTCAAAGCCAGTCATGCAGAGA
ATGGCAACACCTCAACCACAGAGCCATGTTACAGCCGCGACCCCAAATTAACATGAACAGCCTTCGTCTCAGTAT
AA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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