Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|2561
Gene name
Location	scaffold_21:50302..51538
Strand	-
Gene length (bp)	1236
Transcript length (bp)	993
Coding sequence length (bp)	990
Protein length (aa)	330

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	24	17
2	39	58	19
3	93	115	22
4	130	152	22
5	213	235	22
6	245	267	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	11.68	3.90	19.45
CcL	In ants, during behavior modification	5.33	0.21	10.46
CcD	In ants, recently dead	6.85	1.90	11.79

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.066536	no
SC16a	CcD	0.127842	no
CcL	CcD	0.588150	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|2561 MAAEEAWAYLAISSAIVMLRLYARLRSPAGGGLHLDDHLMALVIPLFVAVVIIAQVIVTESGNLANNNMTPTQRE QLDPLSVEFAMRVRGSQLHMAGWILYATLLWTLKFCWLLLYRRFGDRVGRIKLKINLGVVLCASTYLIVVFVVVF ACRPIDRNWQINPDPGDACYPAVSKAQAAISAMANLGTDIYIISIPLPIVWGARISKTDKTVLGTMFVACLVITM SIGLARFGLIIANSSEDTSFVGAWSYRECFVAIVITNMPVLFPWTRQRLRRRSKSSDAAVAPMPAPLQSLAIGSE ETIVQPVEDEDLVETDRKKVEEVDRETLEV
Coding	>Ophio5\|2561 ATGGCGGCCGAGGAGGCTTGGGCGTATCTAGCTATTAGCTCTGCTATTGTGATGCTACGGCTTTACGCTCGGTTG CGGAGCCCCGCGGGCGGAGGTTTGCATTTGGATGACCACTTGATGGCGCTGGTGATACCATTATTCGTGGCCGTC GTTATTATTGCGCAGGTAATTGTGACGGAGTCTGGCAACCTAGCCAACAACAACATGACTCCCACCCAAAGAGAA CAGCTCGACCCCTTAAGCGTCGAATTCGCAATGCGCGTTCGCGGCTCACAGCTTCACATGGCCGGCTGGATTCTC TACGCGACGCTGTTGTGGACGCTCAAGTTCTGCTGGCTGCTGCTATATCGCCGCTTCGGGGATCGAGTTGGTCGC ATCAAGCTCAAGATCAATCTCGGTGTCGTTCTCTGCGCTTCGACTTATCTTATTGTTGTTTTTGTTGTCGTCTTT GCTTGCAGGCCGATTGATCGCAATTGGCAGATCAATCCGGACCCCGGCGATGCTTGTTATCCTGCCGTTTCCAAG GCGCAGGCTGCCATCTCAGCCATGGCGAACCTGGGAACCGATATTTATATCATTTCGATTCCGCTGCCGATCGTC TGGGGAGCCCGCATCTCCAAAACCGACAAAACAGTCCTCGGCACCATGTTCGTCGCCTGCCTCGTCATCACCATG TCCATCGGACTCGCCCGCTTCGGCCTCATCATAGCCAACTCATCCGAGGACACGAGCTTTGTGGGCGCCTGGTCT TATCGCGAGTGTTTCGTCGCCATCGTCATCACCAACATGCCCGTGCTATTTCCCTGGACCAGGCAGAGATTGCGG AGGCGGAGTAAGAGTAGTGACGCTGCTGTCGCTCCGATGCCAGCTCCGCTACAGTCGCTGGCCATTGGCTCCGAG GAGACGATTGTGCAACCAGTTGAGGATGAGGACCTTGTTGAGACGGATCGAAAGAAGGTCGAGGAGGTAGATCGA GAGACTCTGGAGGTG
Transcript	>Ophio5\|2561 ATGGCGGCCGAGGAGGCTTGGGCGTATCTAGCTATTAGCTCTGCTATTGTGATGCTACGGCTTTACGCTCGGTTG CGGAGCCCCGCGGGCGGAGGTTTGCATTTGGATGACCACTTGATGGCGCTGGTGATACCATTATTCGTGGCCGTC GTTATTATTGCGCAGGTAATTGTGACGGAGTCTGGCAACCTAGCCAACAACAACATGACTCCCACCCAAAGAGAA CAGCTCGACCCCTTAAGCGTCGAATTCGCAATGCGCGTTCGCGGCTCACAGCTTCACATGGCCGGCTGGATTCTC TACGCGACGCTGTTGTGGACGCTCAAGTTCTGCTGGCTGCTGCTATATCGCCGCTTCGGGGATCGAGTTGGTCGC ATCAAGCTCAAGATCAATCTCGGTGTCGTTCTCTGCGCTTCGACTTATCTTATTGTTGTTTTTGTTGTCGTCTTT GCTTGCAGGCCGATTGATCGCAATTGGCAGATCAATCCGGACCCCGGCGATGCTTGTTATCCTGCCGTTTCCAAG GCGCAGGCTGCCATCTCAGCCATGGCGAACCTGGGAACCGATATTTATATCATTTCGATTCCGCTGCCGATCGTC TGGGGAGCCCGCATCTCCAAAACCGACAAAACAGTCCTCGGCACCATGTTCGTCGCCTGCCTCGTCATCACCATG TCCATCGGACTCGCCCGCTTCGGCCTCATCATAGCCAACTCATCCGAGGACACGAGCTTTGTGGGCGCCTGGTCT TATCGCGAGTGTTTCGTCGCCATCGTCATCACCAACATGCCCGTGCTATTTCCCTGGACCAGGCAGAGATTGCGG AGGCGGAGTAAGAGTAGTGACGCTGCTGTCGCTCCGATGCCAGCTCCGCTACAGTCGCTGGCCATTGGCTCCGAG GAGACGATTGTGCAACCAGTTGAGGATGAGGACCTTGTTGAGACGGATCGAAAGAAGGTCGAGGAGGTAGATCGA GAGACTCTGGAGGTGTGA
Gene	>Ophio5\|2561 ATGGCGGCCGAGGAGGCTTGGGCGTATCTAGCTATTAGCTCTGCTATTGTGATGCTACGGCTTTACGCTCGGTTG CGGAGCCCCGCGGGCGGAGGTTTGCATTTGGATGACCACTTGATGGCGCTGGTGATAGTGAGTTCATCCGAGTCG GATCTCTGGCTTGCTTGCTTGCTTGGTACTGACGACAGTGGGATAGCCATTATTCGTGGCCGTCGTTATTATTGC GCAGGTAATTGTGACGGAGTCTGGCAACCTAGCCAACAACAAGTAAGTTATCCCTTTCTCCTCCTCTTCCTACTC CTTCCGTTCTCTTCTAACGAAAAAACAGCATGACTCCCACCCAAAGAGAACAGCTCGACCCCTTAAGCGTCGAAT TCGCAATGCGCGTTCGCGGCTCACAGCTTCACATGGCCGGCTGGATTCTCTACGCGACGCTGTTGTGGACGCTCA AGTTCTGCTGGCTGCTGCTATATCGCCGCTTCGGGGATCGAGTTGGTCGCATCAAGCTCAAGATCAATCTCGGTG TCGTTCTCTGCGCTTCGACTTATCTTATTGTTGTTTTTGTTGTCGTCTTTGCTTGCAGGCCGATTGATCGCAATT GGCAGATCAATCCGGACCCCGGCGGTGAGTTCTTTCGCATACATTCTTTATATGTTCCTCAAGCTGATCTCCTGC AGATGCTTGTTATCCTGCCGTTTCCAAGGCGCAGGCTGCCATCTCAGCCATGGCGAACCTGGGAACCGATATTTA TATCATTTCGATTCCGCTGCCGGTAAAGCTCTTCCACTCTTCTTCTTCATCCTTATCCTTCCTCCCAACTGACGA TCCCCTTCTCAGATCGTCTGGGGAGCCCGCATCTCCAAAACCGACAAAACAGTCCTCGGCACCATGTTCGTCGCC TGCCTCGTCATCACCATGTCCATCGGACTCGCCCGCTTCGGCCTCATCATAGCCAACTCATCCGAGGACACGAGC TTTGTGGGCGCCTGGTCTTATCGCGAGTGTTTCGTCGCCATCGTCATCACCAACATGCCCGTGCTATTTCCCTGG ACCAGGCAGAGATTGCGGAGGCGGAGTAAGAGTAGTGACGCTGCTGTCGCTCCGATGCCAGCTCCGCTACAGTCG CTGGCCATTGGCTCCGAGGAGACGATTGTGCAACCAGTTGAGGATGAGGACCTTGTTGAGACGGATCGAAAGAAG GTCGAGGAGGTAGATCGAGAGACTCTGGAGGTGTGA

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