Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2561
Gene name
Locationscaffold_21:50302..51538
Strand-
Gene length (bp)1236
Transcript length (bp)993
Coding sequence length (bp)990
Protein length (aa) 330

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 7 24 17
2 39 58 19
3 93 115 22
4 130 152 22
5 213 235 22
6 245 267 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2561
MAAEEAWAYLAISSAIVMLRLYARLRSPAGGGLHLDDHLMALVIPLFVAVVIIAQVIVTESGNLANNNMTPTQRE
QLDPLSVEFAMRVRGSQLHMAGWILYATLLWTLKFCWLLLYRRFGDRVGRIKLKINLGVVLCASTYLIVVFVVVF
ACRPIDRNWQINPDPGDACYPAVSKAQAAISAMANLGTDIYIISIPLPIVWGARISKTDKTVLGTMFVACLVITM
SIGLARFGLIIANSSEDTSFVGAWSYRECFVAIVITNMPVLFPWTRQRLRRRSKSSDAAVAPMPAPLQSLAIGSE
ETIVQPVEDEDLVETDRKKVEEVDRETLEV
Coding >Ophio5|2561
ATGGCGGCCGAGGAGGCTTGGGCGTATCTAGCTATTAGCTCTGCTATTGTGATGCTACGGCTTTACGCTCGGTTG
CGGAGCCCCGCGGGCGGAGGTTTGCATTTGGATGACCACTTGATGGCGCTGGTGATACCATTATTCGTGGCCGTC
GTTATTATTGCGCAGGTAATTGTGACGGAGTCTGGCAACCTAGCCAACAACAACATGACTCCCACCCAAAGAGAA
CAGCTCGACCCCTTAAGCGTCGAATTCGCAATGCGCGTTCGCGGCTCACAGCTTCACATGGCCGGCTGGATTCTC
TACGCGACGCTGTTGTGGACGCTCAAGTTCTGCTGGCTGCTGCTATATCGCCGCTTCGGGGATCGAGTTGGTCGC
ATCAAGCTCAAGATCAATCTCGGTGTCGTTCTCTGCGCTTCGACTTATCTTATTGTTGTTTTTGTTGTCGTCTTT
GCTTGCAGGCCGATTGATCGCAATTGGCAGATCAATCCGGACCCCGGCGATGCTTGTTATCCTGCCGTTTCCAAG
GCGCAGGCTGCCATCTCAGCCATGGCGAACCTGGGAACCGATATTTATATCATTTCGATTCCGCTGCCGATCGTC
TGGGGAGCCCGCATCTCCAAAACCGACAAAACAGTCCTCGGCACCATGTTCGTCGCCTGCCTCGTCATCACCATG
TCCATCGGACTCGCCCGCTTCGGCCTCATCATAGCCAACTCATCCGAGGACACGAGCTTTGTGGGCGCCTGGTCT
TATCGCGAGTGTTTCGTCGCCATCGTCATCACCAACATGCCCGTGCTATTTCCCTGGACCAGGCAGAGATTGCGG
AGGCGGAGTAAGAGTAGTGACGCTGCTGTCGCTCCGATGCCAGCTCCGCTACAGTCGCTGGCCATTGGCTCCGAG
GAGACGATTGTGCAACCAGTTGAGGATGAGGACCTTGTTGAGACGGATCGAAAGAAGGTCGAGGAGGTAGATCGA
GAGACTCTGGAGGTG
Transcript >Ophio5|2561
ATGGCGGCCGAGGAGGCTTGGGCGTATCTAGCTATTAGCTCTGCTATTGTGATGCTACGGCTTTACGCTCGGTTG
CGGAGCCCCGCGGGCGGAGGTTTGCATTTGGATGACCACTTGATGGCGCTGGTGATACCATTATTCGTGGCCGTC
GTTATTATTGCGCAGGTAATTGTGACGGAGTCTGGCAACCTAGCCAACAACAACATGACTCCCACCCAAAGAGAA
CAGCTCGACCCCTTAAGCGTCGAATTCGCAATGCGCGTTCGCGGCTCACAGCTTCACATGGCCGGCTGGATTCTC
TACGCGACGCTGTTGTGGACGCTCAAGTTCTGCTGGCTGCTGCTATATCGCCGCTTCGGGGATCGAGTTGGTCGC
ATCAAGCTCAAGATCAATCTCGGTGTCGTTCTCTGCGCTTCGACTTATCTTATTGTTGTTTTTGTTGTCGTCTTT
GCTTGCAGGCCGATTGATCGCAATTGGCAGATCAATCCGGACCCCGGCGATGCTTGTTATCCTGCCGTTTCCAAG
GCGCAGGCTGCCATCTCAGCCATGGCGAACCTGGGAACCGATATTTATATCATTTCGATTCCGCTGCCGATCGTC
TGGGGAGCCCGCATCTCCAAAACCGACAAAACAGTCCTCGGCACCATGTTCGTCGCCTGCCTCGTCATCACCATG
TCCATCGGACTCGCCCGCTTCGGCCTCATCATAGCCAACTCATCCGAGGACACGAGCTTTGTGGGCGCCTGGTCT
TATCGCGAGTGTTTCGTCGCCATCGTCATCACCAACATGCCCGTGCTATTTCCCTGGACCAGGCAGAGATTGCGG
AGGCGGAGTAAGAGTAGTGACGCTGCTGTCGCTCCGATGCCAGCTCCGCTACAGTCGCTGGCCATTGGCTCCGAG
GAGACGATTGTGCAACCAGTTGAGGATGAGGACCTTGTTGAGACGGATCGAAAGAAGGTCGAGGAGGTAGATCGA
GAGACTCTGGAGGTGTGA
Gene >Ophio5|2561
ATGGCGGCCGAGGAGGCTTGGGCGTATCTAGCTATTAGCTCTGCTATTGTGATGCTACGGCTTTACGCTCGGTTG
CGGAGCCCCGCGGGCGGAGGTTTGCATTTGGATGACCACTTGATGGCGCTGGTGATAGTGAGTTCATCCGAGTCG
GATCTCTGGCTTGCTTGCTTGCTTGGTACTGACGACAGTGGGATAGCCATTATTCGTGGCCGTCGTTATTATTGC
GCAGGTAATTGTGACGGAGTCTGGCAACCTAGCCAACAACAAGTAAGTTATCCCTTTCTCCTCCTCTTCCTACTC
CTTCCGTTCTCTTCTAACGAAAAAACAGCATGACTCCCACCCAAAGAGAACAGCTCGACCCCTTAAGCGTCGAAT
TCGCAATGCGCGTTCGCGGCTCACAGCTTCACATGGCCGGCTGGATTCTCTACGCGACGCTGTTGTGGACGCTCA
AGTTCTGCTGGCTGCTGCTATATCGCCGCTTCGGGGATCGAGTTGGTCGCATCAAGCTCAAGATCAATCTCGGTG
TCGTTCTCTGCGCTTCGACTTATCTTATTGTTGTTTTTGTTGTCGTCTTTGCTTGCAGGCCGATTGATCGCAATT
GGCAGATCAATCCGGACCCCGGCGGTGAGTTCTTTCGCATACATTCTTTATATGTTCCTCAAGCTGATCTCCTGC
AGATGCTTGTTATCCTGCCGTTTCCAAGGCGCAGGCTGCCATCTCAGCCATGGCGAACCTGGGAACCGATATTTA
TATCATTTCGATTCCGCTGCCGGTAAAGCTCTTCCACTCTTCTTCTTCATCCTTATCCTTCCTCCCAACTGACGA
TCCCCTTCTCAGATCGTCTGGGGAGCCCGCATCTCCAAAACCGACAAAACAGTCCTCGGCACCATGTTCGTCGCC
TGCCTCGTCATCACCATGTCCATCGGACTCGCCCGCTTCGGCCTCATCATAGCCAACTCATCCGAGGACACGAGC
TTTGTGGGCGCCTGGTCTTATCGCGAGTGTTTCGTCGCCATCGTCATCACCAACATGCCCGTGCTATTTCCCTGG
ACCAGGCAGAGATTGCGGAGGCGGAGTAAGAGTAGTGACGCTGCTGTCGCTCCGATGCCAGCTCCGCTACAGTCG
CTGGCCATTGGCTCCGAGGAGACGATTGTGCAACCAGTTGAGGATGAGGACCTTGTTGAGACGGATCGAAAGAAG
GTCGAGGAGGTAGATCGAGAGACTCTGGAGGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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