© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|2559 |
| Gene name | |
| Location | scaffold_21:46674..48052 |
| Strand | - |
| Gene length (bp) | 1378 |
| Transcript length (bp) | 1245 |
| Coding sequence length (bp) | 1242 |
| Protein length (aa) | 414 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 41 | 63 | 22 |
| 2 | 126 | 148 | 22 |
| 3 | 155 | 172 | 17 |
| 4 | 177 | 196 | 19 |
| 5 | 233 | 255 | 22 |
| 6 | 259 | 281 | 22 |
| 7 | 288 | 310 | 22 |
| 8 | 314 | 336 | 22 |
| 9 | 359 | 381 | 22 |
| 10 | 385 | 407 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|2559 MASITQRLPLSGERDGELKTKDKVVETPRPKLTDLTDRRILTFWLFTISSTASFVLWVVAATFVSHIPLRNYHSS SPPPPQQQKQLTGTTVAFNSSFTAHDFLPLESLALASLATETARHISIDVWFAVALTTALDAIAVVLTFNGLLIR RFHFAVSQRLMFIASALSYGVLQRHGFVARHPLVAVGMGFGLYLLFDRALDRFERPMPAGGLRAASKWGSIDKYS ADLGFVEASWPRASFLAACVGGFGLSLTMLVPPPWSALVPILHIFFESVFLSAMGAKRTARYLVLCSPVFFATIC VHWGVSALVTVPRLVIRPWAFVGLVLLGRGLLDLLLKTSLRHRSELQWARREALISTRLLVFLCAGLVALQSLGT GLVTYIKPTMVLAIYGLNGAGFLAVASYNVAFNLSGKDG |
| Coding | >Ophio5|2559 ATGGCCTCCATAACTCAGCGACTGCCTCTGAGCGGCGAGCGTGACGGCGAGTTGAAGACGAAGGACAAGGTGGTC GAAACCCCTCGTCCCAAACTCACCGACCTCACCGACCGTCGAATCCTCACCTTCTGGCTCTTCACCATCAGCAGC ACCGCCTCCTTTGTCCTCTGGGTTGTCGCCGCAACCTTCGTCTCTCACATCCCCCTGCGCAACTACCACTCTTCG TCTCCTCCTCCTCCGCAGCAGCAGAAGCAGCTCACAGGCACGACAGTTGCTTTCAACTCATCCTTCACCGCCCAT GACTTCCTCCCCCTTGAATCCTTGGCCCTCGCCTCCCTCGCGACGGAAACGGCCCGTCACATCTCCATAGACGTC TGGTTCGCCGTCGCCCTCACCACCGCCCTCGATGCCATCGCCGTTGTCCTCACCTTCAACGGCCTACTCATCCGA CGCTTCCACTTCGCCGTCTCACAGCGTCTCATGTTCATCGCCTCAGCGCTGTCGTATGGCGTGCTTCAGCGTCAT GGGTTCGTCGCTCGTCATCCCTTAGTGGCGGTCGGAATGGGATTCGGCCTCTACCTGCTCTTTGACCGCGCCCTC GATCGATTCGAGCGCCCCATGCCGGCTGGAGGGCTGCGCGCGGCGTCGAAATGGGGCTCCATCGATAAATATAGT GCTGATCTCGGCTTCGTCGAGGCGTCTTGGCCCAGGGCCTCGTTTCTGGCTGCCTGCGTTGGGGGCTTTGGCCTT TCCCTGACGATGCTCGTGCCGCCGCCTTGGTCAGCGCTGGTGCCAATTCTTCATATCTTCTTCGAGTCCGTCTTC CTCTCCGCCATGGGTGCCAAGCGAACTGCCCGCTACCTTGTGCTCTGCTCGCCCGTCTTCTTCGCCACTATCTGC GTCCACTGGGGCGTATCTGCTCTCGTGACAGTTCCTCGCCTTGTCATCCGTCCTTGGGCCTTTGTCGGTCTCGTC CTCCTCGGCCGCGGCTTGCTGGATCTGCTGCTGAAAACCAGCCTGAGGCACCGCTCGGAGCTGCAATGGGCCCGT CGCGAGGCCCTCATTAGCACTCGCCTGCTCGTCTTCCTATGTGCCGGCCTCGTGGCGCTACAATCCCTCGGCACA GGCCTAGTTACTTACATCAAGCCCACCATGGTGCTGGCCATCTATGGTCTGAACGGCGCCGGGTTCCTTGCCGTC GCTTCGTACAACGTTGCCTTTAACCTGTCCGGGAAAGACGGA |
| Transcript | >Ophio5|2559 ATGGCCTCCATAACTCAGCGACTGCCTCTGAGCGGCGAGCGTGACGGCGAGTTGAAGACGAAGGACAAGGTGGTC GAAACCCCTCGTCCCAAACTCACCGACCTCACCGACCGTCGAATCCTCACCTTCTGGCTCTTCACCATCAGCAGC ACCGCCTCCTTTGTCCTCTGGGTTGTCGCCGCAACCTTCGTCTCTCACATCCCCCTGCGCAACTACCACTCTTCG TCTCCTCCTCCTCCGCAGCAGCAGAAGCAGCTCACAGGCACGACAGTTGCTTTCAACTCATCCTTCACCGCCCAT GACTTCCTCCCCCTTGAATCCTTGGCCCTCGCCTCCCTCGCGACGGAAACGGCCCGTCACATCTCCATAGACGTC TGGTTCGCCGTCGCCCTCACCACCGCCCTCGATGCCATCGCCGTTGTCCTCACCTTCAACGGCCTACTCATCCGA CGCTTCCACTTCGCCGTCTCACAGCGTCTCATGTTCATCGCCTCAGCGCTGTCGTATGGCGTGCTTCAGCGTCAT GGGTTCGTCGCTCGTCATCCCTTAGTGGCGGTCGGAATGGGATTCGGCCTCTACCTGCTCTTTGACCGCGCCCTC GATCGATTCGAGCGCCCCATGCCGGCTGGAGGGCTGCGCGCGGCGTCGAAATGGGGCTCCATCGATAAATATAGT GCTGATCTCGGCTTCGTCGAGGCGTCTTGGCCCAGGGCCTCGTTTCTGGCTGCCTGCGTTGGGGGCTTTGGCCTT TCCCTGACGATGCTCGTGCCGCCGCCTTGGTCAGCGCTGGTGCCAATTCTTCATATCTTCTTCGAGTCCGTCTTC CTCTCCGCCATGGGTGCCAAGCGAACTGCCCGCTACCTTGTGCTCTGCTCGCCCGTCTTCTTCGCCACTATCTGC GTCCACTGGGGCGTATCTGCTCTCGTGACAGTTCCTCGCCTTGTCATCCGTCCTTGGGCCTTTGTCGGTCTCGTC CTCCTCGGCCGCGGCTTGCTGGATCTGCTGCTGAAAACCAGCCTGAGGCACCGCTCGGAGCTGCAATGGGCCCGT CGCGAGGCCCTCATTAGCACTCGCCTGCTCGTCTTCCTATGTGCCGGCCTCGTGGCGCTACAATCCCTCGGCACA GGCCTAGTTACTTACATCAAGCCCACCATGGTGCTGGCCATCTATGGTCTGAACGGCGCCGGGTTCCTTGCCGTC GCTTCGTACAACGTTGCCTTTAACCTGTCCGGGAAAGACGGATAG |
| Gene | >Ophio5|2559 ATGGCCTCCATAACTCAGCGACTGCCTCTGAGCGGCGAGCGTGACGGCGAGTTGAAGACGAAGGACAAGGTGGTC GGTAAGTGTCTCAGTCCCTTTCTTTCTCACAACGTATCCAGAAACCTCGCTCCTCTTCTCATCAAATCTCACTCA CATCTCACAGAAACCCCTCGTCCCAAACTCACCGACCTCACCGACCGTCGAATCCTCACCTTCTGGCTCTTCACC ATCAGCAGCACCGCCTCCTTTGTCCTCTGGGTTGTCGCCGCAACCTTCGTCTCTCACATCCCCCTGCGCAACTAC CACTCTTCGTCTCCTCCTCCTCCGCAGCAGCAGAAGCAGCTCACAGGCACGACAGTTGCTTTCAACTCATCCTTC ACCGCCCATGACTTCCTCCCCCTTGAATCCTTGGCCCTCGCCTCCCTCGCGACGGAAACGGCCCGTCACATCTCC ATAGACGTCTGGTTCGCCGTCGCCCTCACCACCGCCCTCGATGCCATCGCCGTTGTCCTCACCTTCAACGGCCTA CTCATCCGACGCTTCCACTTCGCCGTCTCACAGCGTCTCATGTTCATCGCCTCAGCGCTGTCGTATGGCGTGCTT CAGCGTCATGGGTTCGTCGCTCGTCATCCCTTAGTGGCGGTCGGAATGGGATTCGGCCTCTACCTGCTCTTTGAC CGCGCCCTCGATCGATTCGAGCGCCCCATGCCGGCTGGAGGGCTGCGCGCGGCGTCGAAATGGGGCTCCATCGAT AAATATAGTGCTGATCTCGGCTTCGTCGAGGCGTCTTGGCCCAGGGCCTCGTTTCTGGCTGCCTGCGTTGGGGGC TTTGGCCTTTCCCTGACGATGCTCGTGCCGCCGCCTTGGTCAGCGCTGGTGCCAATTCTTCATATCTTCTTCGAG GTAAGTCTTCCTCCGTCCAACTAAATATCCCTCTCTTGACACCCTCCAGTCCGTCTTCCTCTCCGCCATGGGTGC CAAGCGAACTGCCCGCTACCTTGTGCTCTGCTCGCCCGTCTTCTTCGCCACTATCTGCGTCCACTGGGGCGTATC TGCTCTCGTGACAGTTCCTCGCCTTGTCATCCGTCCTTGGGCCTTTGTCGGTCTCGTCCTCCTCGGCCGCGGCTT GCTGGATCTGCTGCTGAAAACCAGCCTGAGGCACCGCTCGGAGCTGCAATGGGCCCGTCGCGAGGCCCTCATTAG CACTCGCCTGCTCGTCTTCCTATGTGCCGGCCTCGTGGCGCTACAATCCCTCGGCACAGGCCTAGTTACTTACAT CAAGCCCACCATGGTGCTGGCCATCTATGGTCTGAACGGCGCCGGGTTCCTTGCCGTCGCTTCGTACAACGTTGC CTTTAACCTGTCCGGGAAAGACGGATAG |