Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2554
Gene name
Locationscaffold_21:35011..35769
Strand+
Gene length (bp)758
Transcript length (bp)648
Coding sequence length (bp)645
Protein length (aa) 215

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 44 66 22
3 73 95 22
4 134 156 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2554
MIFALVFVCTRIAQIATLIPLMGMLAWFINIFVSNNALTPDSILILFITTVLALAWAVFTLFSYHRSSANARFVA
LVDLAICGTLIAAVYQLRGIGNADCVPSPGPGRFWAPLVGVSDGFAWGPPDKPCAMLKASWAFAIMNVIFFFVTA
LAAFSHGDHLSAAGFDDGRYRESSRHGHHHHHHHHHRSHSGGRVRSRSRHSSHRSPNSYTRRVYV
Coding >Ophio5|2554
ATGATCTTCGCACTCGTTTTTGTGTGTACGCGCATCGCGCAGATCGCGACCCTCATCCCCCTCATGGGCATGCTT
GCTTGGTTCATCAATATCTTCGTCAGCAACAACGCCCTCACGCCAGACTCGATCCTCATCCTTTTCATCACCACC
GTCCTAGCTCTAGCCTGGGCCGTCTTCACCCTCTTCAGCTACCACCGGTCATCGGCCAATGCCCGATTCGTCGCT
CTCGTCGACCTCGCCATCTGCGGAACCCTCATCGCGGCCGTGTACCAACTTAGAGGTATCGGGAACGCTGATTGT
GTGCCGAGTCCTGGACCGGGACGCTTTTGGGCACCGCTCGTTGGCGTCTCCGACGGGTTTGCTTGGGGGCCTCCG
GATAAGCCTTGTGCTATGCTTAAGGCCTCTTGGGCGTTTGCCATCATGAACGTCATCTTTTTCTTTGTTACTGCC
CTCGCCGCTTTTAGCCATGGCGATCACCTCAGTGCTGCGGGATTTGATGATGGGCGCTATCGCGAGTCGTCGCGA
CATGGACATCATCATCATCACCATCATCATCATCGGTCGCATTCCGGTGGACGCGTTCGAAGCCGTTCTCGACAT
AGCAGCCACCGGAGCCCTAACTCGTACACCCGACGCGTCTACGTC
Transcript >Ophio5|2554
ATGATCTTCGCACTCGTTTTTGTGTGTACGCGCATCGCGCAGATCGCGACCCTCATCCCCCTCATGGGCATGCTT
GCTTGGTTCATCAATATCTTCGTCAGCAACAACGCCCTCACGCCAGACTCGATCCTCATCCTTTTCATCACCACC
GTCCTAGCTCTAGCCTGGGCCGTCTTCACCCTCTTCAGCTACCACCGGTCATCGGCCAATGCCCGATTCGTCGCT
CTCGTCGACCTCGCCATCTGCGGAACCCTCATCGCGGCCGTGTACCAACTTAGAGGTATCGGGAACGCTGATTGT
GTGCCGAGTCCTGGACCGGGACGCTTTTGGGCACCGCTCGTTGGCGTCTCCGACGGGTTTGCTTGGGGGCCTCCG
GATAAGCCTTGTGCTATGCTTAAGGCCTCTTGGGCGTTTGCCATCATGAACGTCATCTTTTTCTTTGTTACTGCC
CTCGCCGCTTTTAGCCATGGCGATCACCTCAGTGCTGCGGGATTTGATGATGGGCGCTATCGCGAGTCGTCGCGA
CATGGACATCATCATCATCACCATCATCATCATCGGTCGCATTCCGGTGGACGCGTTCGAAGCCGTTCTCGACAT
AGCAGCCACCGGAGCCCTAACTCGTACACCCGACGCGTCTACGTCTAG
Gene >Ophio5|2554
ATGATCTTCGCACTCGTTTTTGTGTGTACGCGCATCGCGCAGATCGCGACCCTCGTACGAAGACGCCCCCCTTCC
CCGCAAGACGAATTACATCCAAGTCTATGCCTAGTCGTATCATGACTGATTTATTTATTTTTTTCTTCCTCTCTC
TCTTTCACTGACAGATCCCCCTCATGGGCATGCTTGCTTGGTTCATCAATATCTTCGTCAGCAACAACGCCCTCA
CGCCAGACTCGATCCTCATCCTTTTCATCACCACCGTCCTAGCTCTAGCCTGGGCCGTCTTCACCCTCTTCAGCT
ACCACCGGTCATCGGCCAATGCCCGATTCGTCGCTCTCGTCGACCTCGCCATCTGCGGAACCCTCATCGCGGCCG
TGTACCAACTTAGAGGTATCGGGAACGCTGATTGTGTGCCGAGTCCTGGACCGGGACGCTTTTGGGCACCGCTCG
TTGGCGTCTCCGACGGGTTTGCTTGGGGGCCTCCGGATAAGCCTTGTGCTATGCTTAAGGCCTCTTGGGCGTTTG
CCATCATGAACGTCATCTTTTTCTTTGTTACTGCCCTCGCCGCTTTTAGCCATGGCGATCACCTCAGTGCTGCGG
GATTTGATGATGGGCGCTATCGCGAGTCGTCGCGACATGGACATCATCATCATCACCATCATCATCATCGGTCGC
ATTCCGGTGGACGCGTTCGAAGCCGTTCTCGACATAGCAGCCACCGGAGCCCTAACTCGTACACCCGACGCGTCT
ACGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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