Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2542
Gene name
Locationscaffold_21:8795..9740
Strand-
Gene length (bp)945
Transcript length (bp)888
Coding sequence length (bp)885
Protein length (aa) 295

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane Signal peptide 0.1077 0.1074 0.6451 0.7418 0.0947 0.0065 0.0943 0.3167 0.1415 0.0476

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 190 212 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup6317
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|00058
Ophiocordyceps camponoti-rufipedis Ophun1|618
Ophiocordyceps kimflemingae Ophio5|2542 (this protein)
Ophiocordyceps subramaniannii Hirsu2|9532

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2542
MALSTLLHGAIPSMPMTESAMSCAAPVLPTEFERCRIPGGVDFWTSGGFYSPGVCFAGYSALCTQTTASSGGWPI
QAGETAVRCVPKAYKCNAEGEDQRFAVSDFAGTVLSAPAFEIRWRGVDLKKTAAGLLSSSTSRWALPSETVTVSE
STDAITGAGIASTLRAGTTSSSEAVVESAAVPTTAVGHGYIAAIVVGVVAVLLIAGALIGLCVNRRRRKSSKEGR
RADHLEPVEYTGSQRSPVLEMQPAEMDSMPMGPRELPPTPIDRHASQPTAAAHVSGVFEMAAEQAPNAIK
Coding >Ophio5|2542
ATGGCTCTCAGCACTCTCCTCCACGGCGCCATTCCGTCCATGCCCATGACGGAGTCGGCGATGTCCTGCGCAGCT
CCTGTGCTGCCGACCGAATTCGAGCGCTGCCGCATCCCCGGCGGCGTCGACTTCTGGACAAGCGGCGGCTTCTAC
TCGCCCGGTGTATGCTTCGCCGGCTACAGCGCCCTTTGCACGCAGACGACGGCGTCGAGTGGAGGCTGGCCCATC
CAGGCCGGGGAAACGGCAGTCAGATGCGTGCCGAAGGCCTACAAATGCAACGCCGAAGGCGAGGACCAACGCTTC
GCCGTCTCTGATTTTGCCGGCACTGTTCTCTCTGCCCCTGCCTTTGAAATTCGATGGCGAGGGGTGGACCTAAAG
AAAACAGCGGCCGGCCTTCTCTCGTCTTCCACGTCCCGCTGGGCCCTTCCCAGCGAGACCGTGACCGTCTCGGAA
TCTACCGATGCAATTACCGGCGCCGGCATCGCCTCCACTTTGAGAGCCGGCACCACCTCTTCTTCGGAAGCCGTG
GTTGAGTCTGCGGCCGTGCCGACGACCGCCGTCGGCCACGGATACATTGCTGCCATTGTTGTTGGTGTCGTCGCC
GTTCTGCTGATTGCAGGAGCCCTAATCGGGCTCTGTGTTAACAGACGCCGTCGGAAGAGCAGTAAAGAAGGTCGG
AGAGCGGACCACCTGGAACCAGTAGAATACACGGGGTCACAACGGTCACCAGTCCTCGAAATGCAGCCCGCTGAG
ATGGACAGCATGCCGATGGGCCCTCGCGAACTGCCACCCACCCCCATAGATCGCCATGCTTCGCAGCCAACAGCA
GCAGCCCATGTCTCGGGCGTCTTTGAGATGGCTGCTGAGCAAGCGCCAAACGCCATCAAG
Transcript >Ophio5|2542
ATGGCTCTCAGCACTCTCCTCCACGGCGCCATTCCGTCCATGCCCATGACGGAGTCGGCGATGTCCTGCGCAGCT
CCTGTGCTGCCGACCGAATTCGAGCGCTGCCGCATCCCCGGCGGCGTCGACTTCTGGACAAGCGGCGGCTTCTAC
TCGCCCGGTGTATGCTTCGCCGGCTACAGCGCCCTTTGCACGCAGACGACGGCGTCGAGTGGAGGCTGGCCCATC
CAGGCCGGGGAAACGGCAGTCAGATGCGTGCCGAAGGCCTACAAATGCAACGCCGAAGGCGAGGACCAACGCTTC
GCCGTCTCTGATTTTGCCGGCACTGTTCTCTCTGCCCCTGCCTTTGAAATTCGATGGCGAGGGGTGGACCTAAAG
AAAACAGCGGCCGGCCTTCTCTCGTCTTCCACGTCCCGCTGGGCCCTTCCCAGCGAGACCGTGACCGTCTCGGAA
TCTACCGATGCAATTACCGGCGCCGGCATCGCCTCCACTTTGAGAGCCGGCACCACCTCTTCTTCGGAAGCCGTG
GTTGAGTCTGCGGCCGTGCCGACGACCGCCGTCGGCCACGGATACATTGCTGCCATTGTTGTTGGTGTCGTCGCC
GTTCTGCTGATTGCAGGAGCCCTAATCGGGCTCTGTGTTAACAGACGCCGTCGGAAGAGCAGTAAAGAAGGTCGG
AGAGCGGACCACCTGGAACCAGTAGAATACACGGGGTCACAACGGTCACCAGTCCTCGAAATGCAGCCCGCTGAG
ATGGACAGCATGCCGATGGGCCCTCGCGAACTGCCACCCACCCCCATAGATCGCCATGCTTCGCAGCCAACAGCA
GCAGCCCATGTCTCGGGCGTCTTTGAGATGGCTGCTGAGCAAGCGCCAAACGCCATCAAGTAA
Gene >Ophio5|2542
ATGGCTCTCAGCACTCTCCTCCACGGCGCCATTCCGTCCATGCCCATGACGGAGTCGGCGATGTCCTGCGCAGCT
CCTGTGCTGCCGACCGAATTCGAGCGCTGCCGCATCCCCGGCGGCGTCGACTTCTGGACAAGCGGCGGCTTCTAC
TCGCCCGGTGTATGCTTCGCCGGCTACAGCGCCCTTTGCACGCAGACGACGGCGTCGAGTGGAGGCTGGCCCATC
CAGGCCGGGGAAACGGCAGTCAGATGCGTGCCGAAGTGAGACCAGCATCCACATCTCCGCGGGCCTCGTTGCCGC
TGACGACGCGGCTGCAGGGCCTACAAATGCAACGCCGAAGGCGAGGACCAACGCTTCGCCGTCTCTGATTTTGCC
GGCACTGTTCTCTCTGCCCCTGCCTTTGAAATTCGATGGCGAGGGGTGGACCTAAAGAAAACAGCGGCCGGCCTT
CTCTCGTCTTCCACGTCCCGCTGGGCCCTTCCCAGCGAGACCGTGACCGTCTCGGAATCTACCGATGCAATTACC
GGCGCCGGCATCGCCTCCACTTTGAGAGCCGGCACCACCTCTTCTTCGGAAGCCGTGGTTGAGTCTGCGGCCGTG
CCGACGACCGCCGTCGGCCACGGATACATTGCTGCCATTGTTGTTGGTGTCGTCGCCGTTCTGCTGATTGCAGGA
GCCCTAATCGGGCTCTGTGTTAACAGACGCCGTCGGAAGAGCAGTAAAGAAGGTCGGAGAGCGGACCACCTGGAA
CCAGTAGAATACACGGGGTCACAACGGTCACCAGTCCTCGAAATGCAGCCCGCTGAGATGGACAGCATGCCGATG
GGCCCTCGCGAACTGCCACCCACCCCCATAGATCGCCATGCTTCGCAGCCAACAGCAGCAGCCCATGTCTCGGGC
GTCTTTGAGATGGCTGCTGAGCAAGCGCCAAACGCCATCAAGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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