Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|2535
Gene name
Location	scaffold_209:22847..23981
Strand	+
Gene length (bp)	1134
Transcript length (bp)	1134
Coding sequence length (bp)	1131
Protein length (aa)	377

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03690	UPF0160	Uncharacterised protein family (UPF0160)	3.4E-118	24	375

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9JK81\|MYG1_MOUSE	UPF0160 protein MYG1, mitochondrial OS=Mus musculus GN=Myg1 PE=1 SV=1	5	375	2.0E-90
sp\|Q9HB07\|MYG1_HUMAN	UPF0160 protein MYG1, mitochondrial OS=Homo sapiens GN=C12orf10 PE=1 SV=2	20	375	3.0E-89
sp\|Q58DG1\|MYG1_BOVIN	UPF0160 protein MYG1, mitochondrial OS=Bos taurus PE=2 SV=1	20	375	5.0E-89
sp\|Q641W2\|MYG1_RAT	UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus GN=Myg1 PE=1 SV=1	6	375	1.0E-88
sp\|O17606\|YK4P_CAEEL	UPF0160 protein C27H6.8 OS=Caenorhabditis elegans GN=C27H6.8 PE=3 SV=2	25	377	2.0E-81

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9JK81\|MYG1_MOUSE	UPF0160 protein MYG1, mitochondrial OS=Mus musculus GN=Myg1 PE=1 SV=1	5	375	2.0E-90
sp\|Q9HB07\|MYG1_HUMAN	UPF0160 protein MYG1, mitochondrial OS=Homo sapiens GN=C12orf10 PE=1 SV=2	20	375	3.0E-89
sp\|Q58DG1\|MYG1_BOVIN	UPF0160 protein MYG1, mitochondrial OS=Bos taurus PE=2 SV=1	20	375	5.0E-89
sp\|Q641W2\|MYG1_RAT	UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus GN=Myg1 PE=1 SV=1	6	375	1.0E-88
sp\|O17606\|YK4P_CAEEL	UPF0160 protein C27H6.8 OS=Caenorhabditis elegans GN=C27H6.8 PE=3 SV=2	25	377	2.0E-81
sp\|Q55G91\|U160_DICDI	UPF0160 protein OS=Dictyostelium discoideum GN=DDB_G0267768 PE=3 SV=1	20	376	9.0E-80
sp\|Q9P7T6\|YIW4_SCHPO	UPF0160 protein C694.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC694.04c PE=3 SV=1	25	376	3.0E-78
sp\|P40093\|YEY6_YEAST	UPF0160 protein YER156C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YER156C PE=1 SV=1	16	375	1.0E-71
sp\|Q9Z862\|Y489_CHLPN	UPF0160 protein CPn_0489/CP_0265/CPj0489/CpB0509 OS=Chlamydia pneumoniae GN=CPn_0489 PE=3 SV=2	22	358	2.0E-23
sp\|Q9PK08\|Y665_CHLMU	UPF0160 protein TC_0665 OS=Chlamydia muridarum (strain MoPn / Nigg) GN=TC_0665 PE=3 SV=2	22	369	1.0E-20
sp\|O84391\|Y386_CHLTR	UPF0160 protein CT_386 OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=CT_386 PE=3 SV=2	22	195	4.0E-18

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 53	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|2535 MPPLRFLASMTEFVAKRVKMTPPTIGTHNGHFHADEALAVHILRMLPAYSEAALVRTRDPTRLASCHTVVDVGGE YDVGRRRFDHHQRSFEKVFPGRGTKLSSAGLVFLHFGRAIVARRMGREVEDDVTDNDAIVVADEDDVGMIHRKVY AGFIEALDAQDNGIDVYDPTALAAAGISQRFSQAGFALSAVVGRRNLTWNDPSVLSSTEADAVQKLEDDHFLAAS RRIGEEFERELDYCLGSWLPARAIVRRAFADRFRHDVQGRLLVFDNDDLLSPPWKDHLFALEDTAASSPVLYVLY REKPKLEAKWRIQCVPKSRDSFVSRKPLPEAWRGVRDEDLSSITGIPGCIFVHASGFIGGNATLEGVKEMAAKAL DV
Coding	>Ophio5\|2535 ATGCCCCCTCTCCGCTTCCTGGCCTCAATGACCGAGTTCGTCGCCAAACGCGTCAAGATGACTCCCCCGACCATC GGAACGCACAACGGCCACTTTCACGCCGACGAGGCGCTGGCGGTTCATATACTGCGCATGCTCCCTGCTTACAGT GAAGCGGCGCTGGTCCGCACCCGCGATCCGACCCGTCTGGCCTCCTGCCACACCGTCGTCGACGTCGGCGGCGAG TACGATGTCGGCCGTCGGCGCTTCGATCACCACCAGCGCTCCTTTGAAAAGGTGTTTCCCGGACGCGGCACCAAG CTGTCGAGTGCGGGCCTGGTGTTTTTACACTTTGGCAGGGCTATCGTTGCGCGGAGGATGGGGCGTGAAGTTGAG GATGATGTTACAGATAATGATGCCATCGTTGTTGCCGACGAGGATGATGTCGGTATGATACACCGCAAGGTTTAC GCCGGTTTCATCGAGGCTCTAGACGCGCAAGACAACGGCATCGATGTCTACGACCCTACAGCTCTCGCAGCCGCT GGCATTTCCCAGCGCTTCAGCCAGGCTGGCTTCGCCCTCTCCGCTGTCGTCGGTCGCCGCAATCTTACTTGGAAC GATCCGAGTGTCCTGTCCAGCACCGAGGCCGATGCGGTGCAGAAACTCGAGGACGACCACTTCCTTGCTGCCAGC CGCCGCATTGGCGAGGAGTTTGAGCGCGAGCTCGACTACTGTCTTGGTTCTTGGCTGCCCGCCCGCGCTATTGTT CGACGCGCCTTCGCAGATCGCTTCCGCCACGATGTCCAAGGCCGCTTGCTCGTCTTTGACAATGATGACCTGCTC TCGCCGCCCTGGAAGGACCACCTCTTCGCTCTCGAGGATACCGCTGCCTCGTCTCCCGTTCTATACGTCCTCTAT CGCGAGAAGCCCAAGCTCGAAGCCAAGTGGCGCATCCAATGTGTCCCCAAGTCCAGGGACTCCTTTGTTAGCCGC AAGCCCCTACCCGAGGCCTGGCGCGGTGTTCGCGACGAGGACCTCAGCAGCATCACCGGCATCCCGGGCTGCATC TTCGTCCACGCCTCTGGCTTCATTGGCGGAAATGCCACATTGGAGGGGGTCAAGGAGATGGCTGCTAAGGCGCTG GACGTC
Transcript	>Ophio5\|2535 ATGCCCCCTCTCCGCTTCCTGGCCTCAATGACCGAGTTCGTCGCCAAACGCGTCAAGATGACTCCCCCGACCATC GGAACGCACAACGGCCACTTTCACGCCGACGAGGCGCTGGCGGTTCATATACTGCGCATGCTCCCTGCTTACAGT GAAGCGGCGCTGGTCCGCACCCGCGATCCGACCCGTCTGGCCTCCTGCCACACCGTCGTCGACGTCGGCGGCGAG TACGATGTCGGCCGTCGGCGCTTCGATCACCACCAGCGCTCCTTTGAAAAGGTGTTTCCCGGACGCGGCACCAAG CTGTCGAGTGCGGGCCTGGTGTTTTTACACTTTGGCAGGGCTATCGTTGCGCGGAGGATGGGGCGTGAAGTTGAG GATGATGTTACAGATAATGATGCCATCGTTGTTGCCGACGAGGATGATGTCGGTATGATACACCGCAAGGTTTAC GCCGGTTTCATCGAGGCTCTAGACGCGCAAGACAACGGCATCGATGTCTACGACCCTACAGCTCTCGCAGCCGCT GGCATTTCCCAGCGCTTCAGCCAGGCTGGCTTCGCCCTCTCCGCTGTCGTCGGTCGCCGCAATCTTACTTGGAAC GATCCGAGTGTCCTGTCCAGCACCGAGGCCGATGCGGTGCAGAAACTCGAGGACGACCACTTCCTTGCTGCCAGC CGCCGCATTGGCGAGGAGTTTGAGCGCGAGCTCGACTACTGTCTTGGTTCTTGGCTGCCCGCCCGCGCTATTGTT CGACGCGCCTTCGCAGATCGCTTCCGCCACGATGTCCAAGGCCGCTTGCTCGTCTTTGACAATGATGACCTGCTC TCGCCGCCCTGGAAGGACCACCTCTTCGCTCTCGAGGATACCGCTGCCTCGTCTCCCGTTCTATACGTCCTCTAT CGCGAGAAGCCCAAGCTCGAAGCCAAGTGGCGCATCCAATGTGTCCCCAAGTCCAGGGACTCCTTTGTTAGCCGC AAGCCCCTACCCGAGGCCTGGCGCGGTGTTCGCGACGAGGACCTCAGCAGCATCACCGGCATCCCGGGCTGCATC TTCGTCCACGCCTCTGGCTTCATTGGCGGAAATGCCACATTGGAGGGGGTCAAGGAGATGGCTGCTAAGGCGCTG GACGTCTAG
Gene	>Ophio5\|2535 ATGCCCCCTCTCCGCTTCCTGGCCTCAATGACCGAGTTCGTCGCCAAACGCGTCAAGATGACTCCCCCGACCATC GGAACGCACAACGGCCACTTTCACGCCGACGAGGCGCTGGCGGTTCATATACTGCGCATGCTCCCTGCTTACAGT GAAGCGGCGCTGGTCCGCACCCGCGATCCGACCCGTCTGGCCTCCTGCCACACCGTCGTCGACGTCGGCGGCGAG TACGATGTCGGCCGTCGGCGCTTCGATCACCACCAGCGCTCCTTTGAAAAGGTGTTTCCCGGACGCGGCACCAAG CTGTCGAGTGCGGGCCTGGTGTTTTTACACTTTGGCAGGGCTATCGTTGCGCGGAGGATGGGGCGTGAAGTTGAG GATGATGTTACAGATAATGATGCCATCGTTGTTGCCGACGAGGATGATGTCGGTATGATACACCGCAAGGTTTAC GCCGGTTTCATCGAGGCTCTAGACGCGCAAGACAACGGCATCGATGTCTACGACCCTACAGCTCTCGCAGCCGCT GGCATTTCCCAGCGCTTCAGCCAGGCTGGCTTCGCCCTCTCCGCTGTCGTCGGTCGCCGCAATCTTACTTGGAAC GATCCGAGTGTCCTGTCCAGCACCGAGGCCGATGCGGTGCAGAAACTCGAGGACGACCACTTCCTTGCTGCCAGC CGCCGCATTGGCGAGGAGTTTGAGCGCGAGCTCGACTACTGTCTTGGTTCTTGGCTGCCCGCCCGCGCTATTGTT CGACGCGCCTTCGCAGATCGCTTCCGCCACGATGTCCAAGGCCGCTTGCTCGTCTTTGACAATGATGACCTGCTC TCGCCGCCCTGGAAGGACCACCTCTTCGCTCTCGAGGATACCGCTGCCTCGTCTCCCGTTCTATACGTCCTCTAT CGCGAGAAGCCCAAGCTCGAAGCCAAGTGGCGCATCCAATGTGTCCCCAAGTCCAGGGACTCCTTTGTTAGCCGC AAGCCCCTACCCGAGGCCTGGCGCGGTGTTCGCGACGAGGACCTCAGCAGCATCACCGGCATCCCGGGCTGCATC TTCGTCCACGCCTCTGGCTTCATTGGCGGAAATGCCACATTGGAGGGGGTCAAGGAGATGGCTGCTAAGGCGCTG GACGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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