Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2525
Gene name
Locationscaffold_208:29540..30785
Strand+
Gene length (bp)1245
Transcript length (bp)1245
Coding sequence length (bp)1242
Protein length (aa) 414

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09729 Gti1_Pac2 Gti1/Pac2 family 1.4E-57 12 179

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|S0E3H0|WOR1_GIBF5 Global transcription regulator sge1 OS=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) GN=sge1 PE=2 SV=1 8 233 1.0E-92
sp|J9N5P9|WOR1_FUSO4 Global transcription regulator sge1 OS=Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) GN=sge1 PE=2 SV=1 8 240 2.0E-92
sp|G2X740|WOR1_VERDV Global transcription regulator sge1 OS=Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137) GN=sge1 PE=3 SV=1 3 220 3.0E-92
sp|W7MPI5|WOR1_GIBM7 Global transcription regulator sge1 OS=Gibberella moniliformis (strain M3125 / FGSC 7600) GN=sge1 PE=3 SV=1 6 218 3.0E-79
sp|I1S5P3|WOR1_GIBZE Global transcription regulator FGP1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FGP1 PE=3 SV=1 9 218 7.0E-69
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|S0E3H0|WOR1_GIBF5 Global transcription regulator sge1 OS=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) GN=sge1 PE=2 SV=1 8 233 1.0E-92
sp|J9N5P9|WOR1_FUSO4 Global transcription regulator sge1 OS=Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) GN=sge1 PE=2 SV=1 8 240 2.0E-92
sp|G2X740|WOR1_VERDV Global transcription regulator sge1 OS=Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137) GN=sge1 PE=3 SV=1 3 220 3.0E-92
sp|W7MPI5|WOR1_GIBM7 Global transcription regulator sge1 OS=Gibberella moniliformis (strain M3125 / FGSC 7600) GN=sge1 PE=3 SV=1 6 218 3.0E-79
sp|I1S5P3|WOR1_GIBZE Global transcription regulator FGP1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FGP1 PE=3 SV=1 9 218 7.0E-69
sp|P40002|MIT1_YEAST Transcriptional regulator MIT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MIT1 PE=1 SV=1 9 209 3.0E-39
sp|O14367|GTI1_SCHPO Gluconate transport inducer 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gti1 PE=4 SV=1 9 92 3.0E-28
sp|Q10294|PAC2_SCHPO cAMP-independent regulatory protein pac2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pac2 PE=2 SV=1 12 200 3.0E-24
sp|P38867|YHX7_YEAST Uncharacterized protein YHR177W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHR177W PE=1 SV=2 9 207 2.0E-23
sp|Q5AP80|WOR1_CANAL White-opaque regulator 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=WOR1 PE=1 SV=1 5 90 3.0E-23
sp|O14367|GTI1_SCHPO Gluconate transport inducer 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gti1 PE=4 SV=1 138 215 9.0E-16
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2525
MSSQSSNPLNPTWQGHIASTLDALMLFESSLGGLLNHVPRRPHDRERQDLIKSGSVFIYEEHASGIKRWTDGVSW
SPSRILGNFLIYRELEKPFPPGEKKRALKKKKTSAGGISKSDGASRPGVASFAAAAGMEVGRDTERSLIGSLIDS
YPFKSEGLVKKTISITYRGVPHHLVSYYSVDDVMSGRLLTPSKDPRLRDIVPRIELMTSQNFRAPVDEIEYGPDG
APALFAAVPNGPHDYGGGSGSILQRAWGNPGIQNVPVQAYPNTPTFSFQSGPHHSYVSSMGVPMGSSMPPPMSST
MASPAPSSMQPPGSGPHSYAQSPQEDFGTVTNGPHDFGSNSGGIMPRNWANSGMQNVSVATYATTPTFSFPPAPH
HPYVSSMGSSIPPPLPSSMASPAPSSMERISEPTFPPPP
Coding >Ophio5|2525
ATGTCAAGTCAATCGTCGAACCCGCTGAATCCGACATGGCAGGGCCACATAGCATCCACGCTCGATGCTTTGATG
CTCTTCGAAAGCTCCCTCGGGGGCTTGCTCAATCACGTTCCACGACGGCCGCACGATCGCGAGCGTCAGGACCTA
ATCAAGAGTGGTAGTGTCTTCATCTACGAGGAGCATGCTTCTGGCATTAAGAGGTGGACCGACGGCGTCTCTTGG
AGTCCCAGTCGCATCCTCGGAAACTTTCTCATCTACCGCGAACTCGAGAAGCCCTTTCCGCCGGGAGAGAAGAAG
CGCGCATTGAAGAAGAAGAAGACCTCGGCCGGCGGAATCAGCAAGAGCGATGGCGCATCACGGCCCGGCGTGGCC
AGCTTTGCCGCCGCGGCCGGCATGGAGGTTGGCAGAGACACGGAACGATCTCTGATAGGCTCCCTCATCGACTCC
TATCCGTTCAAATCCGAGGGGCTCGTCAAGAAGACAATCAGCATCACCTACCGCGGCGTCCCGCACCATCTCGTC
AGCTACTACAGTGTAGACGATGTCATGTCGGGCCGCCTCCTGACTCCCTCAAAGGACCCCAGACTGAGGGACATC
GTCCCAAGGATCGAGCTCATGACGTCGCAAAACTTCCGGGCCCCCGTGGACGAAATTGAGTACGGTCCTGACGGG
GCCCCTGCTCTCTTCGCCGCCGTTCCCAATGGCCCTCACGATTACGGCGGCGGCTCTGGCAGTATCTTGCAGAGG
GCCTGGGGAAATCCCGGCATTCAGAACGTCCCAGTGCAAGCATACCCAAACACACCTACCTTCTCCTTTCAGTCT
GGACCGCACCACTCTTACGTCTCTTCCATGGGCGTTCCCATGGGCTCTTCCATGCCGCCGCCCATGTCGTCGACC
ATGGCGTCGCCCGCCCCTTCTTCGATGCAACCACCGGGCTCTGGGCCGCATTCCTACGCTCAGTCTCCCCAGGAA
GACTTCGGCACCGTCACCAATGGCCCTCACGACTTTGGCAGCAACTCCGGCGGCATCATGCCAAGAAATTGGGCG
AATTCCGGCATGCAGAATGTTTCGGTGGCAACGTACGCAACCACGCCTACCTTTTCGTTTCCGCCTGCGCCGCAC
CACCCTTATGTCTCTTCTATGGGTTCATCAATCCCGCCGCCTTTACCATCGTCTATGGCGTCGCCCGCGCCGTCG
TCGATGGAGCGCATATCTGAGCCGACCTTCCCGCCGCCTCCG
Transcript >Ophio5|2525
ATGTCAAGTCAATCGTCGAACCCGCTGAATCCGACATGGCAGGGCCACATAGCATCCACGCTCGATGCTTTGATG
CTCTTCGAAAGCTCCCTCGGGGGCTTGCTCAATCACGTTCCACGACGGCCGCACGATCGCGAGCGTCAGGACCTA
ATCAAGAGTGGTAGTGTCTTCATCTACGAGGAGCATGCTTCTGGCATTAAGAGGTGGACCGACGGCGTCTCTTGG
AGTCCCAGTCGCATCCTCGGAAACTTTCTCATCTACCGCGAACTCGAGAAGCCCTTTCCGCCGGGAGAGAAGAAG
CGCGCATTGAAGAAGAAGAAGACCTCGGCCGGCGGAATCAGCAAGAGCGATGGCGCATCACGGCCCGGCGTGGCC
AGCTTTGCCGCCGCGGCCGGCATGGAGGTTGGCAGAGACACGGAACGATCTCTGATAGGCTCCCTCATCGACTCC
TATCCGTTCAAATCCGAGGGGCTCGTCAAGAAGACAATCAGCATCACCTACCGCGGCGTCCCGCACCATCTCGTC
AGCTACTACAGTGTAGACGATGTCATGTCGGGCCGCCTCCTGACTCCCTCAAAGGACCCCAGACTGAGGGACATC
GTCCCAAGGATCGAGCTCATGACGTCGCAAAACTTCCGGGCCCCCGTGGACGAAATTGAGTACGGTCCTGACGGG
GCCCCTGCTCTCTTCGCCGCCGTTCCCAATGGCCCTCACGATTACGGCGGCGGCTCTGGCAGTATCTTGCAGAGG
GCCTGGGGAAATCCCGGCATTCAGAACGTCCCAGTGCAAGCATACCCAAACACACCTACCTTCTCCTTTCAGTCT
GGACCGCACCACTCTTACGTCTCTTCCATGGGCGTTCCCATGGGCTCTTCCATGCCGCCGCCCATGTCGTCGACC
ATGGCGTCGCCCGCCCCTTCTTCGATGCAACCACCGGGCTCTGGGCCGCATTCCTACGCTCAGTCTCCCCAGGAA
GACTTCGGCACCGTCACCAATGGCCCTCACGACTTTGGCAGCAACTCCGGCGGCATCATGCCAAGAAATTGGGCG
AATTCCGGCATGCAGAATGTTTCGGTGGCAACGTACGCAACCACGCCTACCTTTTCGTTTCCGCCTGCGCCGCAC
CACCCTTATGTCTCTTCTATGGGTTCATCAATCCCGCCGCCTTTACCATCGTCTATGGCGTCGCCCGCGCCGTCG
TCGATGGAGCGCATATCTGAGCCGACCTTCCCGCCGCCTCCGTGA
Gene >Ophio5|2525
ATGTCAAGTCAATCGTCGAACCCGCTGAATCCGACATGGCAGGGCCACATAGCATCCACGCTCGATGCTTTGATG
CTCTTCGAAAGCTCCCTCGGGGGCTTGCTCAATCACGTTCCACGACGGCCGCACGATCGCGAGCGTCAGGACCTA
ATCAAGAGTGGTAGTGTCTTCATCTACGAGGAGCATGCTTCTGGCATTAAGAGGTGGACCGACGGCGTCTCTTGG
AGTCCCAGTCGCATCCTCGGAAACTTTCTCATCTACCGCGAACTCGAGAAGCCCTTTCCGCCGGGAGAGAAGAAG
CGCGCATTGAAGAAGAAGAAGACCTCGGCCGGCGGAATCAGCAAGAGCGATGGCGCATCACGGCCCGGCGTGGCC
AGCTTTGCCGCCGCGGCCGGCATGGAGGTTGGCAGAGACACGGAACGATCTCTGATAGGCTCCCTCATCGACTCC
TATCCGTTCAAATCCGAGGGGCTCGTCAAGAAGACAATCAGCATCACCTACCGCGGCGTCCCGCACCATCTCGTC
AGCTACTACAGTGTAGACGATGTCATGTCGGGCCGCCTCCTGACTCCCTCAAAGGACCCCAGACTGAGGGACATC
GTCCCAAGGATCGAGCTCATGACGTCGCAAAACTTCCGGGCCCCCGTGGACGAAATTGAGTACGGTCCTGACGGG
GCCCCTGCTCTCTTCGCCGCCGTTCCCAATGGCCCTCACGATTACGGCGGCGGCTCTGGCAGTATCTTGCAGAGG
GCCTGGGGAAATCCCGGCATTCAGAACGTCCCAGTGCAAGCATACCCAAACACACCTACCTTCTCCTTTCAGTCT
GGACCGCACCACTCTTACGTCTCTTCCATGGGCGTTCCCATGGGCTCTTCCATGCCGCCGCCCATGTCGTCGACC
ATGGCGTCGCCCGCCCCTTCTTCGATGCAACCACCGGGCTCTGGGCCGCATTCCTACGCTCAGTCTCCCCAGGAA
GACTTCGGCACCGTCACCAATGGCCCTCACGACTTTGGCAGCAACTCCGGCGGCATCATGCCAAGAAATTGGGCG
AATTCCGGCATGCAGAATGTTTCGGTGGCAACGTACGCAACCACGCCTACCTTTTCGTTTCCGCCTGCGCCGCAC
CACCCTTATGTCTCTTCTATGGGTTCATCAATCCCGCCGCCTTTACCATCGTCTATGGCGTCGCCCGCGCCGTCG
TCGATGGAGCGCATATCTGAGCCGACCTTCCCGCCGCCTCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail