Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2524
Gene name
Locationscaffold_208:19477..21802
Strand+
Gene length (bp)2325
Transcript length (bp)1629
Coding sequence length (bp)1626
Protein length (aa) 542

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06087 Tyr-DNA_phospho Tyrosyl-DNA phosphodiesterase 5.3E-87 112 531

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q8BJ37|TYDP1_MOUSE Tyrosyl-DNA phosphodiesterase 1 OS=Mus musculus GN=Tdp1 PE=1 SV=2 127 539 2.0E-09
sp|Q8H1D9|TYDP1_ARATH Tyrosyl-DNA phosphodiesterase 1 OS=Arabidopsis thaliana GN=TDP1 PE=1 SV=1 63 540 9.0E-09

GO

GO Term Description Terminal node
GO:0005634 nucleus Yes
GO:0006281 DNA repair Yes
GO:0008081 phosphoric diester hydrolase activity Yes
GO:0044238 primary metabolic process No
GO:0044260 cellular macromolecule metabolic process No
GO:0003674 molecular_function No
GO:0044237 cellular metabolic process No
GO:0008152 metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0043226 organelle No
GO:0046483 heterocycle metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0110165 cellular anatomical entity No
GO:0006259 DNA metabolic process No
GO:0050896 response to stimulus No
GO:0006725 cellular aromatic compound metabolic process No
GO:0008150 biological_process No
GO:1901360 organic cyclic compound metabolic process No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0071704 organic substance metabolic process No
GO:0033554 cellular response to stress No
GO:0043170 macromolecule metabolic process No
GO:0009987 cellular process No
GO:0016787 hydrolase activity No
GO:0043231 intracellular membrane-bounded organelle No
GO:0043229 intracellular organelle No
GO:0005575 cellular_component No
GO:0043227 membrane-bounded organelle No
GO:0051716 cellular response to stimulus No
GO:0006807 nitrogen compound metabolic process No
GO:0042578 phosphoric ester hydrolase activity No
GO:0003824 catalytic activity No
GO:0006974 cellular response to DNA damage stimulus No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0006950 response to stress No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.3146 0.9318 0.1127 0.0055 0.0541 0.0037 0.0223 0.0223 0.0257 0.0062

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup5011
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3284
Ophiocordyceps australis map64 (Brazil) OphauB2|2781
Ophiocordyceps camponoti-floridani Ophcf2|06051
Ophiocordyceps camponoti-rufipedis Ophun1|3150
Ophiocordyceps kimflemingae Ophio5|2524 (this protein)
Ophiocordyceps subramaniannii Hirsu2|2451

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2524
MTEPNPDAELDSDDEALRMAIAMSLQELQGEASPASTAAAPAPPQSGTLLALDRKKMEEERLARLAKKRPRADDD
DDDDDAVEVLLPPSKKPVSTPDSKSGDACLPYPHGAVKRTWARGYPRTGDDIKIEEVLQRDQLLLALLSSYQWDD
DWLLSKVDVSRTKLLLAAYAADDRQKQVMRANAPPHLKFCFPPMHGPGSMHSKLQMLKFPRYLRLVVPTGNLVPY
DWGETGVMENMVFLIDLPRLDKASDHKPTPFSRHLEHFLRAMGVESKMVDSMSSYDFSKTADLGFVYTSPGGHMD
ESMKRVGYNGLGAAVMTLGLATSEPIEIDMASASLGYLKCGFVEALYNACQGDDGMKEYSQRAATKSTRKPDDKH
SRPRHWQQLKDRIRIYFPTNQTVSDSRGGKAAAGTICVQARWWRSPDFPTELVRDCINTREGLLMHTKVIFVRRR
TPSSSLRSGRPAWAYVGSANLSESAWGRLVKDKQSGKAKMSCRNWECGVVVPVGGAAAAADLGVFQGTVPLPMKV
PGRAYGPEEEPWFFEGT
Coding >Ophio5|2524
ATGACCGAACCCAACCCCGATGCCGAGCTCGACTCCGATGACGAGGCCCTCCGCATGGCCATCGCCATGTCTCTA
CAGGAGCTGCAAGGAGAGGCATCACCTGCGAGCACTGCGGCAGCGCCGGCCCCGCCACAGAGTGGAACGCTACTC
GCTCTCGACCGCAAGAAGATGGAGGAGGAGCGGCTCGCCAGGCTGGCCAAGAAACGCCCTCGTGCCGACGACGAC
GACGACGACGACGACGCTGTCGAGGTGCTGCTACCGCCAAGCAAGAAGCCCGTGTCAACCCCCGACAGCAAAAGC
GGAGACGCCTGTCTCCCGTATCCTCATGGCGCCGTCAAGCGTACCTGGGCCCGTGGCTATCCGCGCACCGGCGAC
GACATCAAGATCGAGGAGGTGCTGCAGAGGGATCAGCTGCTGCTCGCCCTGCTCTCGTCCTATCAGTGGGACGAT
GACTGGCTGCTTTCCAAGGTGGACGTGTCCAGGACTAAGCTTCTCCTGGCCGCGTACGCTGCAGATGATCGACAG
AAACAAGTCATGCGGGCCAATGCGCCACCGCACCTTAAGTTCTGCTTCCCGCCGATGCATGGGCCTGGATCCATG
CATTCCAAGCTGCAGATGCTCAAGTTCCCTCGATACCTACGACTTGTAGTACCCACAGGAAACCTTGTGCCCTAC
GACTGGGGCGAGACAGGTGTCATGGAGAATATGGTCTTCCTCATCGATCTGCCCCGCCTGGACAAGGCCTCAGAT
CACAAGCCCACTCCATTCAGTCGCCATCTCGAGCACTTTCTCCGAGCCATGGGCGTTGAAAGCAAAATGGTTGAC
AGCATGTCGAGCTACGACTTCTCCAAGACGGCCGATCTGGGGTTTGTGTATACCAGTCCCGGGGGGCACATGGAC
GAGTCGATGAAGCGAGTCGGGTACAACGGCTTGGGCGCCGCCGTAATGACGCTGGGCCTGGCAACGTCGGAGCCC
ATTGAAATCGACATGGCGAGCGCCAGTCTCGGATACCTCAAATGCGGCTTTGTCGAGGCCCTGTACAACGCCTGC
CAGGGCGATGACGGCATGAAAGAGTACAGCCAGAGAGCAGCAACGAAGTCGACTCGTAAGCCGGACGACAAGCAC
TCGCGGCCACGGCATTGGCAGCAGCTGAAGGACCGAATCCGCATCTACTTTCCGACAAATCAAACCGTCTCCGAC
AGCCGGGGCGGAAAAGCAGCTGCAGGCACCATCTGCGTGCAGGCAAGGTGGTGGCGCTCGCCAGATTTCCCAACC
GAGTTGGTCCGCGACTGCATCAACACAAGAGAGGGGCTTCTCATGCACACCAAGGTCATCTTTGTGCGTAGGAGG
ACGCCCTCGAGCAGTCTCCGGAGCGGGCGGCCAGCCTGGGCGTACGTGGGGAGCGCCAACCTGTCCGAAAGCGCC
TGGGGCCGACTAGTCAAGGACAAGCAGTCGGGCAAGGCCAAGATGAGCTGCCGCAACTGGGAGTGTGGTGTCGTG
GTGCCCGTGGGCGGCGCGGCGGCAGCGGCCGACTTGGGCGTCTTTCAAGGCACAGTGCCCCTACCTATGAAAGTG
CCGGGTCGAGCGTACGGGCCAGAGGAGGAGCCATGGTTCTTCGAAGGCACT
Transcript >Ophio5|2524
ATGACCGAACCCAACCCCGATGCCGAGCTCGACTCCGATGACGAGGCCCTCCGCATGGCCATCGCCATGTCTCTA
CAGGAGCTGCAAGGAGAGGCATCACCTGCGAGCACTGCGGCAGCGCCGGCCCCGCCACAGAGTGGAACGCTACTC
GCTCTCGACCGCAAGAAGATGGAGGAGGAGCGGCTCGCCAGGCTGGCCAAGAAACGCCCTCGTGCCGACGACGAC
GACGACGACGACGACGCTGTCGAGGTGCTGCTACCGCCAAGCAAGAAGCCCGTGTCAACCCCCGACAGCAAAAGC
GGAGACGCCTGTCTCCCGTATCCTCATGGCGCCGTCAAGCGTACCTGGGCCCGTGGCTATCCGCGCACCGGCGAC
GACATCAAGATCGAGGAGGTGCTGCAGAGGGATCAGCTGCTGCTCGCCCTGCTCTCGTCCTATCAGTGGGACGAT
GACTGGCTGCTTTCCAAGGTGGACGTGTCCAGGACTAAGCTTCTCCTGGCCGCGTACGCTGCAGATGATCGACAG
AAACAAGTCATGCGGGCCAATGCGCCACCGCACCTTAAGTTCTGCTTCCCGCCGATGCATGGGCCTGGATCCATG
CATTCCAAGCTGCAGATGCTCAAGTTCCCTCGATACCTACGACTTGTAGTACCCACAGGAAACCTTGTGCCCTAC
GACTGGGGCGAGACAGGTGTCATGGAGAATATGGTCTTCCTCATCGATCTGCCCCGCCTGGACAAGGCCTCAGAT
CACAAGCCCACTCCATTCAGTCGCCATCTCGAGCACTTTCTCCGAGCCATGGGCGTTGAAAGCAAAATGGTTGAC
AGCATGTCGAGCTACGACTTCTCCAAGACGGCCGATCTGGGGTTTGTGTATACCAGTCCCGGGGGGCACATGGAC
GAGTCGATGAAGCGAGTCGGGTACAACGGCTTGGGCGCCGCCGTAATGACGCTGGGCCTGGCAACGTCGGAGCCC
ATTGAAATCGACATGGCGAGCGCCAGTCTCGGATACCTCAAATGCGGCTTTGTCGAGGCCCTGTACAACGCCTGC
CAGGGCGATGACGGCATGAAAGAGTACAGCCAGAGAGCAGCAACGAAGTCGACTCGTAAGCCGGACGACAAGCAC
TCGCGGCCACGGCATTGGCAGCAGCTGAAGGACCGAATCCGCATCTACTTTCCGACAAATCAAACCGTCTCCGAC
AGCCGGGGCGGAAAAGCAGCTGCAGGCACCATCTGCGTGCAGGCAAGGTGGTGGCGCTCGCCAGATTTCCCAACC
GAGTTGGTCCGCGACTGCATCAACACAAGAGAGGGGCTTCTCATGCACACCAAGGTCATCTTTGTGCGTAGGAGG
ACGCCCTCGAGCAGTCTCCGGAGCGGGCGGCCAGCCTGGGCGTACGTGGGGAGCGCCAACCTGTCCGAAAGCGCC
TGGGGCCGACTAGTCAAGGACAAGCAGTCGGGCAAGGCCAAGATGAGCTGCCGCAACTGGGAGTGTGGTGTCGTG
GTGCCCGTGGGCGGCGCGGCGGCAGCGGCCGACTTGGGCGTCTTTCAAGGCACAGTGCCCCTACCTATGAAAGTG
CCGGGTCGAGCGTACGGGCCAGAGGAGGAGCCATGGTTCTTCGAAGGCACTTGA
Gene >Ophio5|2524
ATGACCGAACCCAACCCCGATGCCGAGCTCGACTCCGATGACGAGGCCCTCCGCATGGCCATCGCCATGTCTCTA
CAGGAGCTGCAAGGAGAGGCATCACCTGCGAGCACTGCGGCAGCGCCGGCCCCGCCACAGAGTGGAACGCTACTC
GCTCTCGACCGCAAGAAGATGGAGGAGGAGCGGCTCGCCAGGCTGGCCAAGAAACGCCCTCGTGCCGACGACGAC
GACGACGACGACGACGCTGTCGAGGTGCTGCTACCGCCAAGCAAGAAGCCCGTGTCAACCCCCGACAGCAAAAGC
GGAGACGCCTGTCTCCCGTATCCTCATGGCGCCGTCAAGCGTACCTGGGCCCGTGGCTATCCGCGCACCGGCGAC
GACATCAAGATCGAGGAGGTGCTGCAGAGGGATCAGCTGCTGCTCGCCCTGCTCTCGTCCTATCAGTGGGACGAT
GACTGGCTGCTTTCCAAGGTGGACGTGTCCAGGACTAAGCTTCTCCTGGCCGCGTACGCTGCAGATGATCGACAG
GTAGGTCCGAGACGACCTCTTCCGAGTCTCCGAGAGCCTTATTGTGCTTGTTCAAACTCTAAACAATCTCACGAT
GCGCCAGAAACAAGTCATGCGGGCCAATGCGCCACCGCACCTTAAGTTCTGCTTCCCGCCGATGCATGGGCCTGG
ATCCATGCATTCCAAGCTGCAGATGCTCAAGTTCCCTCGATACCTACGACTTGTAGTACCCACAGGAAACCTTGT
GCCCTACGACTGGGGCGAGACAGGTGTCATGGAGAATGTCAGAATGACCACTTTGCGCGTGCTACGCTACAAAGA
CGCTCATGTGTGTCTAGATGGTCTTCCTCATCGATCTGCCCCGCCTGGACAAGGCCTCAGATCACAAGCCCACTC
CATTCAGTCGCCATCTCGAGCACTTTCTCCGAGCCATGGGCGTTGAAAGCAAAATGGTTGACAGCATGTCGAGCT
ACGACTTCTCCAAGACGGCCGATCTGGGGTTTGTGTATACCAGGTCCGTCTATCGAGCCATGCAAAGGTATTTGG
TCAGACCGAGCTCACGCCGCCCAGTCCCGGGGGGCACATGGACGAGTCGATGAAGCGAGTCGGTCAGTGGCAACC
AGCCGTTCATGGGTGCGCCATTTGCTGCTGACAGCGGGTCAAGGGTACAACGGCTTGGGCGCCGCCGTAATGACG
CTGGGCCTGGCAACGTCGGAGCCCATTGAAATCGACATGGCGGCATGTGTCATACAATCATCCATCTGCTATCCC
CCAAACGTCCGCAAGGGGTGGGGGTACAGCGCTAACGCCGGGAACTAGAGCGCCAGTCTCGGATACCTCAAATGC
GGCTTTGTCGAGGCCCTGTACAACGCCTGCCAGGGTAAGTGGCTTTGGGGGCCGGCTGCCGTTCTGGCGTTGTCC
ACACCCCCTCTCCCCCCCCCCTTTAATTGGGGAAGGGAAGATGTGGGCTTCGTGCCACGGAGAGAGGGGGAGGGG
AGGGGTGTGCGTGATGGACAAGGCCGGAAGGGCGAGTTGGCGAGAGGGACCGGGTGTGGATCAGTCAGATGTTTG
CCTGACACGTTGGCAGGCGATGACGGCATGAAAGAGTACAGCCAGAGAGCAGCAACGAAGTCGACTCGTAAGCCG
GACGACAAGCACTCGCGGCCACGGCATTGGCAGCAGCTGAAGGACCGAATCCGCATCTACTTTCCGACAAATCAA
ACCGTCTCCGACAGCCGGGGCGGAAAAGCAGTGGGTGGCCAGGGTCGGGTAAGATGGCGCGTTTGTGGGCTAATT
GCCACGCCTGACAATAGGCTGCAGGCACCATCTGCGTGCAGGCAAGGTGGTGGCGCTCGCCAGATTTCCCAACCG
AGTTGGTCCGCGACTGCATCAACACAAGAGAGGGGCTTCTCATGCACACCAAGGTCATCTTTGTGCGTAGGAGGA
CGCCCTCGAGCAGTCTCCGGAGCGGGCGGCCAGCCTGGGCGTACGTGGGGAGCGCCAACCTGTCCGAAAGCGCCT
GGTGAGAGGAACCCCCCTTCCCCCCCCCTCCCCCCCCCAAATGTGGGAGACCGGGAGGTGGGGCACGGAGCGGTA
ATACTGATGGATGAGGCGTGCAGGGGCCGACTAGTCAAGGACAAGCAGTCGGGCAAGGCCAAGATGAGCTGCCGC
AACTGGGAGTGTGGTGTCGTGGTGCCCGTGGGCGGCGCGGCGGCAGCGGCCGACTTGGGCGTCTTTCAAGGCACA
GTGCCCCTACCTATGAAAGTGCCGGGTCGAGCGTACGGGCCAGAGGAGGAGCCATGGTTCTTCGAAGGCACTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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