Protein ID | Ophio5|2523 |
Gene name | |
Location | scaffold_208:17196..19222 |
Strand | - |
Gene length (bp) | 2026 |
Transcript length (bp) | 1782 |
Coding sequence length (bp) | 1779 |
Protein length (aa) | 593 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 8.7E-14 | 92 | 162 |
PF01266 | DAO | FAD dependent oxidoreductase | 1.5E-07 | 89 | 129 |
PF07992 | Pyr_redox_2 | Pyridine nucleotide-disulphide oxidoreductase | 4.3E-06 | 88 | 126 |
PF00890 | FAD_binding_2 | FAD binding domain | 5.1E-07 | 90 | 128 |
PF01593 | Amino_oxidase | Flavin containing amine oxidoreductase | 9.3E-05 | 98 | 139 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016491 | oxidoreductase activity | Yes |
GO:0003824 | catalytic activity | No |
GO:0003674 | molecular_function | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Peroxisome | Peroxisomal targeting signal | 0.4415 | 0.1468 | 0.4018 | 0.1322 | 0.4154 | 0.1359 | 0.2439 | 0.1742 | 0.2755 | 0.6543 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 213 | 232 | 19 |
Orthofinder run ID | 4 |
Orthogroup | 3453 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|2523 MGTTIDHSPWLFPLACALITLIRHPCIPEQIHDVLDWDSSAATPDVMTQREADRPWRQVVFSSHVVRPMPPKHSS GRDEMAPLNSKAKHVVIIGGGAAGMSCAATLANHPDRYKVTVLEKSDVVGGQATSIPLDEQKYGAPWMNNGVQGG SQIFKHTFNFFRQQGFPPQEVQLQVAFGKGDAGFWTNVFPSKLVQRYSADVKKFGFFLKLIKWTMPVLGLVPISI MLRLLFFSKDFGDKMVYPLIALFLGTGNQTPHVPSAIVERLFDDPNMKLWDYDPTTLLPNLPTMFTFDHLHAFYG AWKSDLEANGVTFRNGTDVSEVISRTKHGVKLRIRDVATGSSTEETFDDMVLCVLADDALRILGRQATWREKLVL GGAAFYDDITVTHTDRAYFEKQYETVFKPELCAEPTSDFQKKQIAFAKGEGVEGSGSFQPMYYTFSYQQDPRLIE MSFNCSNYQHQLKKANHDNKDSFEPVYQTIFLNKDLKHLWTIDDIDEAKVIKKNWWHQLGHRWQHYLRVVPGMMF INGKNRTCFAGSWTLVNMHELACVSGIAAAYRLGADYKRFDDFAQDFFAKYLLLSHGMMFSRQEKRRH |
Coding | >Ophio5|2523 ATGGGAACGACAATCGACCATTCCCCTTGGTTGTTCCCCTTGGCTTGCGCCCTTATTACATTGATTCGGCACCCT TGCATACCAGAACAAATCCATGACGTGCTCGACTGGGACAGCTCCGCGGCTACCCCCGACGTCATGACCCAACGC GAGGCCGACAGACCCTGGCGACAAGTTGTCTTCTCCTCCCACGTCGTACGTCCAATGCCTCCGAAGCACTCTTCT GGACGTGACGAAATGGCTCCGCTCAACAGCAAGGCCAAGCATGTCGTGATAATCGGTGGAGGGGCCGCAGGCATG TCTTGCGCTGCCACGTTGGCAAACCATCCCGATCGTTACAAAGTCACGGTGCTGGAGAAAAGCGACGTGGTCGGC GGCCAGGCCACGTCAATTCCGCTCGATGAGCAAAAGTACGGCGCACCATGGATGAACAACGGCGTCCAGGGCGGA TCCCAGATATTCAAGCACACCTTCAACTTCTTCCGCCAGCAGGGCTTCCCACCACAGGAAGTTCAGCTGCAGGTG GCCTTTGGCAAGGGAGATGCCGGCTTCTGGACAAATGTCTTCCCTAGTAAACTCGTCCAACGGTACTCGGCCGAT GTCAAGAAGTTTGGCTTTTTCCTCAAGCTCATCAAATGGACCATGCCCGTGCTGGGCCTCGTGCCGATATCCATC ATGCTGCGTCTGCTCTTCTTCAGTAAGGACTTTGGAGATAAGATGGTATATCCTCTTATTGCCCTGTTCCTCGGA ACCGGCAACCAAACTCCTCACGTCCCCTCGGCCATCGTCGAGCGTCTCTTCGACGACCCCAACATGAAGCTATGG GATTACGACCCCACCACCCTACTGCCGAACCTGCCTACCATGTTCACCTTTGACCATCTTCACGCCTTCTACGGC GCCTGGAAGAGTGACTTGGAGGCCAATGGGGTCACCTTCCGGAACGGCACGGATGTATCTGAAGTCATATCGAGG ACGAAGCACGGGGTCAAGCTCCGAATTAGGGACGTGGCTACAGGCAGCTCTACAGAGGAGACGTTTGACGACATG GTTCTTTGTGTTCTGGCCGACGATGCTCTGCGAATACTGGGCCGCCAAGCAACATGGCGTGAAAAGCTGGTCCTC GGCGGCGCTGCCTTTTACGACGACATCACCGTCACCCATACCGATCGGGCCTACTTCGAAAAGCAGTACGAGACC GTCTTCAAGCCGGAGCTGTGCGCGGAGCCAACGTCAGATTTCCAGAAGAAGCAGATTGCCTTTGCCAAAGGCGAA GGGGTTGAAGGCTCGGGCAGCTTCCAGCCCATGTACTACACCTTTTCCTACCAGCAGGACCCGCGCTTGATCGAG ATGTCCTTCAACTGCAGCAACTACCAACATCAGCTGAAAAAGGCTAACCACGACAACAAAGACAGCTTCGAGCCT GTCTACCAAACCATCTTCCTGAACAAGGACCTGAAGCACCTGTGGACGATCGACGACATCGATGAGGCAAAGGTC ATCAAGAAGAACTGGTGGCATCAGCTCGGTCATCGGTGGCAGCATTACCTTCGCGTCGTCCCGGGCATGATGTTC ATCAATGGGAAGAACCGGACGTGCTTTGCAGGATCCTGGACGCTCGTGAACATGCACGAACTGGCTTGCGTCAGT GGCATCGCGGCAGCGTACCGCCTCGGAGCTGATTACAAGCGGTTTGACGATTTTGCGCAAGACTTCTTCGCCAAA TATCTCCTGCTGTCTCATGGGATGATGTTTTCCCGGCAGGAGAAGCGGCGGCAT |
Transcript | >Ophio5|2523 ATGGGAACGACAATCGACCATTCCCCTTGGTTGTTCCCCTTGGCTTGCGCCCTTATTACATTGATTCGGCACCCT TGCATACCAGAACAAATCCATGACGTGCTCGACTGGGACAGCTCCGCGGCTACCCCCGACGTCATGACCCAACGC GAGGCCGACAGACCCTGGCGACAAGTTGTCTTCTCCTCCCACGTCGTACGTCCAATGCCTCCGAAGCACTCTTCT GGACGTGACGAAATGGCTCCGCTCAACAGCAAGGCCAAGCATGTCGTGATAATCGGTGGAGGGGCCGCAGGCATG TCTTGCGCTGCCACGTTGGCAAACCATCCCGATCGTTACAAAGTCACGGTGCTGGAGAAAAGCGACGTGGTCGGC GGCCAGGCCACGTCAATTCCGCTCGATGAGCAAAAGTACGGCGCACCATGGATGAACAACGGCGTCCAGGGCGGA TCCCAGATATTCAAGCACACCTTCAACTTCTTCCGCCAGCAGGGCTTCCCACCACAGGAAGTTCAGCTGCAGGTG GCCTTTGGCAAGGGAGATGCCGGCTTCTGGACAAATGTCTTCCCTAGTAAACTCGTCCAACGGTACTCGGCCGAT GTCAAGAAGTTTGGCTTTTTCCTCAAGCTCATCAAATGGACCATGCCCGTGCTGGGCCTCGTGCCGATATCCATC ATGCTGCGTCTGCTCTTCTTCAGTAAGGACTTTGGAGATAAGATGGTATATCCTCTTATTGCCCTGTTCCTCGGA ACCGGCAACCAAACTCCTCACGTCCCCTCGGCCATCGTCGAGCGTCTCTTCGACGACCCCAACATGAAGCTATGG GATTACGACCCCACCACCCTACTGCCGAACCTGCCTACCATGTTCACCTTTGACCATCTTCACGCCTTCTACGGC GCCTGGAAGAGTGACTTGGAGGCCAATGGGGTCACCTTCCGGAACGGCACGGATGTATCTGAAGTCATATCGAGG ACGAAGCACGGGGTCAAGCTCCGAATTAGGGACGTGGCTACAGGCAGCTCTACAGAGGAGACGTTTGACGACATG GTTCTTTGTGTTCTGGCCGACGATGCTCTGCGAATACTGGGCCGCCAAGCAACATGGCGTGAAAAGCTGGTCCTC GGCGGCGCTGCCTTTTACGACGACATCACCGTCACCCATACCGATCGGGCCTACTTCGAAAAGCAGTACGAGACC GTCTTCAAGCCGGAGCTGTGCGCGGAGCCAACGTCAGATTTCCAGAAGAAGCAGATTGCCTTTGCCAAAGGCGAA GGGGTTGAAGGCTCGGGCAGCTTCCAGCCCATGTACTACACCTTTTCCTACCAGCAGGACCCGCGCTTGATCGAG ATGTCCTTCAACTGCAGCAACTACCAACATCAGCTGAAAAAGGCTAACCACGACAACAAAGACAGCTTCGAGCCT GTCTACCAAACCATCTTCCTGAACAAGGACCTGAAGCACCTGTGGACGATCGACGACATCGATGAGGCAAAGGTC ATCAAGAAGAACTGGTGGCATCAGCTCGGTCATCGGTGGCAGCATTACCTTCGCGTCGTCCCGGGCATGATGTTC ATCAATGGGAAGAACCGGACGTGCTTTGCAGGATCCTGGACGCTCGTGAACATGCACGAACTGGCTTGCGTCAGT GGCATCGCGGCAGCGTACCGCCTCGGAGCTGATTACAAGCGGTTTGACGATTTTGCGCAAGACTTCTTCGCCAAA TATCTCCTGCTGTCTCATGGGATGATGTTTTCCCGGCAGGAGAAGCGGCGGCATTGA |
Gene | >Ophio5|2523 ATGGGAACGACAATCGACCATTCCCCTTGGTTGTTCCCCTTGGCTTGCGCCCTTATTACATTGATTCGGCACCCT TGCATACCAGAACAAATCCATGACGTGCTCGACTGGGACAGCTCCGCGGCTACCCCCGACGTCATGACCCAACGC GAGGCCGACAGACCCTGGCGACAAGTTGTCTTCTCCTCCCACGTCGTACGTCGTACGTCGCACAGCGTCCTGCTT GTGCAAACGCTCGCCGCCTGCAGCAATGCCTCCGAAGCACTCTTCTGGACGTGACGAAATGGCTCCGCTCAACAG CAAGGCCAAGCATGTCGTGATAATCGGTGGAGGGGCCGCAGGCATGGTAGGTAGGCTCCGGGCAGCAAGACTCTA TCGACCCCTATCGACCTTATCGCCCTCTCAGGACCGCCGCATTGACCTAACCTATAGTCTTGCGCTGCCACGTTG GCAAACCATCCCGATCGTTACAAAGTCACGGTGCTGGAGAAAAGCGACGTGGTCGGCGGCCAGGCCACGTCAATT CCGCTCGATGAGCAAAAGTACGGCGCACCATGGATGAACAACGGCGTCCAGGGCGGATCCCAGGTCAGCCTCGCC AGGCCCTAACTCACGTCGCCCGGCTGACGAGGCGTACCGCAGATATTCAAGCACACCTTCAACTTCTTCCGCCAG CAGGGCTTCCCACCACAGGAAGTTCAGCTGCAGGTGGCCTTTGGCAAGGGAGATGCCGGCTTCTGGACAAATGTC TTCCCTAGTAAACTCGTCCAACGGTACTCGGCCGATGTCAAGAAGTTTGGCTTTTTCCTCAAGCTCATCAAATGG ACCATGCCCGTGCTGGGCCTCGTGCCGATATCCATCATGCTGCGTCTGCTCTTCTTCAGTAAGGACTTTGGAGAT AAGATGGTATATCCTCTTATTGCCCTGTTCCTCGGAACCGGCAACCAAACTCCTCACGTCCCCTCGGCCATCGTC GAGCGTCTCTTCGACGACCCCAACATGAAGCTATGGGATTACGACCCCACCACCCTACTGCCGAACCTGCCTACC ATGTTCACCTTTGACCATCTTCACGCCTTCTACGGCGCCTGGAAGAGTGACTTGGAGGCCAATGGGGTCACCTTC CGGAACGGCACGGATGTATCTGAAGTCATATCGAGGACGAAGCACGGGGTCAAGCTCCGAATTAGGGACGTGGCT ACAGGCAGCTCTACAGAGGAGACGTTTGACGACATGGTTCTTTGTGTTCTGGCCGACGATGCTCTGCGAATACTG GGCCGCCAAGCAACATGGCGTGAAAAGCTGGTCCTCGGCGGCGCTGCCTTTTACGACGACATCACCGTCACCCAT ACCGATCGGGCCTACTTCGAAAAGCAGTACGAGACCGTCTTCAAGCCGGAGCTGTGCGCGGAGCCAACGTCAGAT TTCCAGAAGAAGCAGATTGCCTTTGCCAAAGGCGAAGGGGTTGAAGGCTCGGGCAGCTTCCAGCCCATGTACTAC ACCTTTTCCTACCAGCAGGACCCGCGCTTGATCGAGATGTCCTTCAACTGCAGCAACTACCAACATCAGCTGAAA AAGGCTAACCACGACAACAAAGACAGCTTCGAGCCTGTCTACCAAACCATCTTCCTGAACAAGGACCTGAAGCAC CTGTGGACGATCGACGACATCGATGAGGCAAAGGTCATCAAGAAGAACTGGTGGCATCAGCTCGGTCATCGGTGG CAGCATTACCTTCGCGTCGTCCCGGGCATGATGTTCATCAATGGGAAGAACCGGACGTGCTTTGCAGGATCCTGG ACGCTCGTGGTAAGAAGGCTACCCCTCGGATTGGTTTGGAGAGTATCGGCTCAACTCGGGGGTGTAGAACATGCA CGAACTGGCTTGCGTCAGTGGCATCGCGGCAGCGTACCGCCTCGGAGCTGATTACAAGCGGTTTGACGATTTTGC GCAAGACTTCTTCGCCAAATATCTCCTGCTGTCTCATGGGATGATGTTTTCCCGGCAGGAGAAGCGGCGGCATTG A |